RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	SEC14L3	Q9UDX4	400 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ZFP69B	Q9UJL9	534 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PYCARD	Q9ULZ3	195 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	NPIPA1	Q9UND3	350 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	VPS9D1	Q9Y2B5	631 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	VWA7	Q9Y334	891 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	JRKL	Q9Y4A0	524 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	FAM215A	Q9Y5M1	114 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	MAD1L1	Q9Y6D9	718 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	COMMD10	Q9Y6G5	202 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PHF3	Q92576	2039 aa	Known RBP	4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	FREM3	P0C091	2139 aa		4.15	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ZAN	Q9Y493	2812 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	FLNA	P21333	2647 aa	Known RBP	4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ANKHD1	Q8IWZ3	2542 aa	Known RBP	4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329		A0A1B0GTH9	108 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329		A0A1B0GTL3	188 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329		A0A1B0GUH1	482 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329		F8W8V4	182 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	AP3B1	O00203	1094 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	RTCA	O00442	366 aa	Known RBP	4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CES2	O00748	559 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CLDN4	O14493	209 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TTI1	O43156	1089 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PHGDH	O43175	533 aa	Known RBP	4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PRKRA	O75569	313 aa	Known RBP	4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SLC25A12	O75746	678 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	WFS1	O76024	890 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	GLS	O94925	669 aa	Predicted RBP	4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	OR6B1	O95007	311 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CCNDBP1	O95273	360 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ETHE1	O95571	254 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SERPINA6	P08185	405 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ANXA5	P08758	320 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	RFPL3S	P0C7P2	107 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	HRH2	P25021	359 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CXCR2	P25025	360 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SSTR1	P30872	391 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	AHR	P35869	848 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	GGT5	P36269	586 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	AVPR1B	P47901	424 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	AGTR2	P50052	363 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	HLCS	P50747	726 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CCR8	P51685	355 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	OR4D2	P58180	307 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	GPR85	P60893	370 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	IGLV3-21	P80748	117 aa	Predicted RBP	4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CDKL1	Q00532	357 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	GUCY2D	Q02846	1103 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PCDH1	Q08174	1060 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	THOC5	Q13769	683 aa	Known RBP	4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ZKSCAN8	Q15776	578 aa	Predicted RBP	4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	MEP1A	Q16819	746 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TTLL9	Q3SXZ7	439 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TOR1AIP1	Q5JTV8	583 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	THEMIS2	Q5TEJ8	643 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ABHD17B	Q5VST6	288 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SLC25A25	Q6KCM7	469 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ABHD17C	Q6PCB6	329 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ZDHHC24	Q6UX98	284 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	QSOX2	Q6ZRP7	698 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	KIAA0408	Q6ZU52	694 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	LGI4	Q8N135	537 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ZFP62	Q8NB50	900 aa	Predicted RBP	4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CAMKV	Q8NCB2	501 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	MCOLN3	Q8TDD5	553 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	DOK4	Q8TEW6	326 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	AGAP11	Q8TF27	550 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	MAIP1	Q8WWC4	291 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SLC5A11	Q8WWX8	675 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	RERG	Q96A58	199 aa	Predicted RBP	4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ALKBH8	Q96BT7	664 aa	Known RBP	4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CFAP36	Q96G28	342 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PDLIM2	Q96JY6	352 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ZNF354B	Q96LW1	612 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PTCHD1	Q96NR3	888 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	GPR78	Q96P69	363 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	F2RL3	Q96RI0	385 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	FAM167B	Q9BTA0	163 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SORBS1	Q9BX66	1292 aa	Known RBP	4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	UCK2	Q9BZX2	261 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ZDHHC11	Q9H8X9	412 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PELI2	Q9HAT8	420 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	KCNK13	Q9HB14	408 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ANKH	Q9HCJ1	492 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	HOMER3	Q9NSC5	361 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	IGSF5	Q9NSI5	407 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ARL15	Q9NXU5	204 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TAS2R13	Q9NYV9	303 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	LRFN1	Q9P244	771 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TNFRSF10D	Q9UBN6	386 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TRMT6	Q9UJA5	497 aa	Known RBP	4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PTBP2	Q9UKA9	531 aa	Known RBP	4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	G3BP2	Q9UN86	482 aa	Known RBP	4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	MRFAP1	Q9Y605	127 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	VPS13C	Q709C8	3753 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ABCA4	P78363	2273 aa		4.14	□□□□□ -1.75
PPP4R1-209	ENST00000578329	EXPH5	Q8NEV8	1989 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	DNHD1	Q96M86	4753 aa		4.13	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms