RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 HCN3Q9P1Z3 774 aa13.76□□□□□ -0.21
NPLOC4-218ENST00000574964 TRPC4Q9UBN4 977 aa13.76□□□□□ -0.21
NPLOC4-218ENST00000574964 ZDHHC2Q9UIJ5 367 aa13.76□□□□□ -0.21
NPLOC4-218ENST00000574964 KCND3Q9UK17 655 aa13.76□□□□□ -0.21
NPLOC4-218ENST00000574964 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.76□□□□□ -0.21
NPLOC4-218ENST00000574964 PADI2Q9Y2J8 665 aa13.76□□□□□ -0.21
NPLOC4-218ENST00000574964 AKAP13Q12802 2813 aa13.76□□□□□ -0.21
NPLOC4-218ENST00000574964 NUP210LQ5VU65 1888 aa13.76□□□□□ -0.21
NPLOC4-218ENST00000574964 TPRP12270 2363 aaKnown RBP13.75□□□□□ -0.21
NPLOC4-218ENST00000574964 LOC101059948A0A1B0GTJ6 334 aa13.75□□□□□ -0.21
NPLOC4-218ENST00000574964 C21orf140B9A014 251 aa13.75□□□□□ -0.21
NPLOC4-218ENST00000574964 SLC28A1O00337 649 aa13.75□□□□□ -0.21
NPLOC4-218ENST00000574964 RTCAO00442 366 aaKnown RBP13.75□□□□□ -0.21
NPLOC4-218ENST00000574964 ETHE1O95571 254 aa13.75□□□□□ -0.21
NPLOC4-218ENST00000574964 ARRB2P32121 409 aa13.75□□□□□ -0.21
NPLOC4-218ENST00000574964 RPL14P50914 215 aaKnown RBP13.75□□□□□ -0.21
NPLOC4-218ENST00000574964 OLR1P78380 273 aa13.75□□□□□ -0.21
NPLOC4-218ENST00000574964 MAT1AQ00266 395 aaKnown RBP13.75□□□□□ -0.21
NPLOC4-218ENST00000574964 BTKQ06187 659 aa13.75□□□□□ -0.21
NPLOC4-218ENST00000574964 SPDYAQ5MJ70 313 aa13.75□□□□□ -0.21
NPLOC4-218ENST00000574964 CES4AQ5XG92 561 aa13.75□□□□□ -0.21
NPLOC4-218ENST00000574964 KANK2Q63ZY3 851 aa13.75□□□□□ -0.21
NPLOC4-218ENST00000574964 OR4C11Q6IEV9 310 aa13.75□□□□□ -0.21
NPLOC4-218ENST00000574964 LCN10Q6JVE6 187 aa13.75□□□□□ -0.21
NPLOC4-218ENST00000574964 OVCH1Q7RTY7 1134 aa13.75□□□□□ -0.21
NPLOC4-218ENST00000574964 VASH2Q86V25 355 aa13.75□□□□□ -0.21
NPLOC4-218ENST00000574964 PDSS2Q86YH6 399 aa13.75□□□□□ -0.21
NPLOC4-218ENST00000574964 ZNF781Q8N8C0 355 aa13.75□□□□□ -0.21
NPLOC4-218ENST00000574964 FAM76AQ8TAV0 307 aa13.75□□□□□ -0.21
NPLOC4-218ENST00000574964 TWIST2Q8WVJ9 160 aa13.75□□□□□ -0.21
NPLOC4-218ENST00000574964 SERINC2Q96SA4 455 aa13.75□□□□□ -0.21
NPLOC4-218ENST00000574964 PRDM7Q9NQW5 492 aa13.75□□□□□ -0.21
NPLOC4-218ENST00000574964 VPS29Q9UBQ0 182 aa13.75□□□□□ -0.21
NPLOC4-218ENST00000574964 ZNF282Q9UDV7 671 aaPredicted RBP13.75□□□□□ -0.21
NPLOC4-218ENST00000574964 FARSAQ9Y285 508 aaKnown RBP13.75□□□□□ -0.21
NPLOC4-218ENST00000574964 MAP4K5Q9Y4K4 846 aa13.75□□□□□ -0.21
NPLOC4-218ENST00000574964 ARHGAP10A1A4S6 786 aa13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 TMEM233B4DJY2 109 aa13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 C4orf51C9J302 202 aa13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 PSMD12O00232 456 aaPredicted RBP13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 KLF11O14901 512 aa13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 RGS14O43566 566 aa13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 SKAP2O75563 359 aaPredicted RBP13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 SEMA3DO95025 777 aa13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 ALBP02768 609 aa13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 RAB40ALP0C0E4 278 aa13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 ITGAXP20702 1163 aa13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 CERS1P27544 350 aa13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 EIF2S3P41091 472 aaKnown RBP13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 ARFIP1P53367 373 aa13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 SNRPNP63162 240 aaKnown RBP13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 HMGCS1Q01581 520 aa13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 NCF4Q15080 339 aa13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 SYT16Q17RD7 645 aa13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 MFSD4BQ5TF39 518 aa13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 BROXQ5VW32 411 aa13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 CYP20A1Q6UW02 462 aa13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 FAM198BQ6UWH4 519 aa13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 ZNF517Q6ZMY9 492 aaPredicted RBP13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 PAGE2Q7Z2X7 111 aa13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 NUDT13Q86X67 352 aa13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 ENDOVQ8N8Q3 282 aaKnown RBP13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 ACOT4Q8N9L9 421 aa13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 OR5T3Q8NGG3 340 aa13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 OR51Q1Q8NH59 317 aa13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 FKBP10Q96AY3 582 aa13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 MIEF2Q96C03 454 aa13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 PEX11GQ96HA9 241 aa13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 QRFPRQ96P65 431 aa13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 SORT1Q99523 831 aa13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 SORBS1Q9BX66 1292 aaKnown RBP13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 NPLQ9BXD5 320 aaPredicted RBP13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 GPR87Q9BY21 358 aa13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 MRPL1Q9BYD6 325 aaKnown RBP13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 ACPTQ9BZG2 426 aa13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 C20orf27Q9GZN8 174 aa13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 CLK4Q9HAZ1 481 aaKnown RBP13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 MKKSQ9NPJ1 570 aaPredicted RBP13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 SLC22A11Q9NSA0 550 aa13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 NXT1Q9UKK6 140 aaKnown RBP13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 RAXQ9Y2V3 346 aa13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 PTRH2Q9Y3E5 179 aaKnown RBP13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 SPACA6W5XKT8 324 aa13.74□□□□□ -0.21
NPLOC4-218ENST00000574964 SERTM1A2A2V5 107 aa13.73□□□□□ -0.21
NPLOC4-218ENST00000574964 PLPP1O14494 284 aa13.73□□□□□ -0.21
NPLOC4-218ENST00000574964 CHST10O43529 356 aa13.73□□□□□ -0.21
NPLOC4-218ENST00000574964 MYO1DO94832 1006 aa13.73□□□□□ -0.21
NPLOC4-218ENST00000574964 ONECUT2O95948 504 aa13.73□□□□□ -0.21
NPLOC4-218ENST00000574964 LINC00032P0C843 101 aa13.73□□□□□ -0.21
NPLOC4-218ENST00000574964 RNH1P13489 461 aaKnown RBP13.73□□□□□ -0.21
NPLOC4-218ENST00000574964 LIFP15018 202 aa13.73□□□□□ -0.21
NPLOC4-218ENST00000574964 HIST1H1TP22492 207 aaPredicted RBP13.73□□□□□ -0.21
NPLOC4-218ENST00000574964 ATP5A1P25705 553 aaKnown RBP13.73□□□□□ -0.21
NPLOC4-218ENST00000574964 FOLR3P41439 243 aa13.73□□□□□ -0.21
NPLOC4-218ENST00000574964 TSFMP43897 325 aaKnown RBP13.73□□□□□ -0.21
NPLOC4-218ENST00000574964 XCR1P46094 333 aa13.73□□□□□ -0.21
NPLOC4-218ENST00000574964 ACSM2AQ08AH3 577 aa13.73□□□□□ -0.21
NPLOC4-218ENST00000574964 NKG7Q16617 165 aa13.73□□□□□ -0.21
NPLOC4-218ENST00000574964 ACSM2BQ68CK6 577 aa13.73□□□□□ -0.21
NPLOC4-218ENST00000574964 MRPL14Q6P1L8 145 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms