RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 SLC6A18Q96N87 628 aa27.11■■□□□ 1.93
CTDNEP1-210ENST00000574322 AICDAQ9GZX7 198 aa27.11■■□□□ 1.93
CTDNEP1-210ENST00000574322 TPT1P8Q9HAU6 139 aa27.11■■□□□ 1.93
CTDNEP1-210ENST00000574322 ARHGEF17Q96PE2 2063 aaPredicted RBP27.11■■□□□ 1.93
CTDNEP1-210ENST00000574322 SNRNP200O75643 2136 aaKnown RBP27.11■■□□□ 1.93
CTDNEP1-210ENST00000574322 ARHGAP10A1A4S6 786 aa27.1■■□□□ 1.93
CTDNEP1-210ENST00000574322 TNFSF14O43557 240 aa27.1■■□□□ 1.93
CTDNEP1-210ENST00000574322 ZNF26P17031 533 aaPredicted RBP27.1■■□□□ 1.93
CTDNEP1-210ENST00000574322 IL1RNP18510 177 aa27.1■■□□□ 1.93
CTDNEP1-210ENST00000574322 HYAL2Q12891 473 aa27.1■■□□□ 1.93
CTDNEP1-210ENST00000574322 CPZQ66K79 652 aa27.1■■□□□ 1.93
CTDNEP1-210ENST00000574322 OR4C11Q6IEV9 310 aa27.1■■□□□ 1.93
CTDNEP1-210ENST00000574322 ERICH5Q6P6B1 374 aa27.1■■□□□ 1.93
CTDNEP1-210ENST00000574322 ZFP90Q8TF47 636 aa27.1■■□□□ 1.93
CTDNEP1-210ENST00000574322 FIG4Q92562 907 aa27.1■■□□□ 1.93
CTDNEP1-210ENST00000574322 OLAHQ9NV23 265 aa27.1■■□□□ 1.93
CTDNEP1-210ENST00000574322 CPNE7Q9UBL6 633 aa27.1■■□□□ 1.93
CTDNEP1-210ENST00000574322 SPASTQ9UBP0 616 aa27.1■■□□□ 1.93
CTDNEP1-210ENST00000574322 SLCO1B1Q9Y6L6 691 aa27.1■■□□□ 1.93
CTDNEP1-210ENST00000574322 TRBV23OR9-2A0A075B6M9 112 aa27.1■■□□□ 1.93
CTDNEP1-210ENST00000574322 RTCAO00442 366 aaKnown RBP27.1■■□□□ 1.93
CTDNEP1-210ENST00000574322 NDUFS2O75306 463 aa27.1■■□□□ 1.93
CTDNEP1-210ENST00000574322 VIPP01282 170 aa27.1■■□□□ 1.93
CTDNEP1-210ENST00000574322 HOXB6P17509 224 aaKnown RBP27.1■■□□□ 1.93
CTDNEP1-210ENST00000574322 DDX5P17844 614 aaKnown RBP27.1■■□□□ 1.93
CTDNEP1-210ENST00000574322 HOXA6P31267 233 aa27.1■■□□□ 1.93
CTDNEP1-210ENST00000574322 GPR18Q14330 331 aa27.1■■□□□ 1.93
CTDNEP1-210ENST00000574322 IQCHQ86VS3 1027 aa27.1■■□□□ 1.93
CTDNEP1-210ENST00000574322 TRIM48Q8IWZ4 208 aa27.1■■□□□ 1.93
CTDNEP1-210ENST00000574322 FAM47BQ8NA70 645 aa27.1■■□□□ 1.93
CTDNEP1-210ENST00000574322 EME1Q96AY2 570 aa27.1■■□□□ 1.93
CTDNEP1-210ENST00000574322 CENPNQ96H22 339 aaPredicted RBP27.1■■□□□ 1.93
CTDNEP1-210ENST00000574322 SEMA6AQ9H2E6 1030 aa27.1■■□□□ 1.93
CTDNEP1-210ENST00000574322 VCXQ9H320 206 aa27.1■■□□□ 1.93
CTDNEP1-210ENST00000574322 FBXO4Q9UKT5 387 aa27.1■■□□□ 1.93
CTDNEP1-210ENST00000574322 KLK4Q9Y5K2 254 aa27.1■■□□□ 1.93
CTDNEP1-210ENST00000574322 A0A0A6YYD5 115 aa27.09■■□□□ 1.93
CTDNEP1-210ENST00000574322 AXIN1O15169 862 aa27.09■■□□□ 1.93
CTDNEP1-210ENST00000574322 CREG1O75629 220 aa27.09■■□□□ 1.93
CTDNEP1-210ENST00000574322 KCNK5O95279 499 aa27.09■■□□□ 1.93
CTDNEP1-210ENST00000574322 FKBP9O95302 570 aa27.09■■□□□ 1.93
CTDNEP1-210ENST00000574322 UQCRBP14927 111 aa27.09■■□□□ 1.93
CTDNEP1-210ENST00000574322 DMWDQ09019 674 aa27.09■■□□□ 1.93
CTDNEP1-210ENST00000574322 HEPACAMQ14CZ8 416 aa27.09■■□□□ 1.93
CTDNEP1-210ENST00000574322 AMIGO2Q86SJ2 522 aa27.09■■□□□ 1.93
CTDNEP1-210ENST00000574322 OR2A14Q96R47 310 aa27.09■■□□□ 1.93
CTDNEP1-210ENST00000574322 LRFN3Q9BTN0 628 aa27.09■■□□□ 1.93
CTDNEP1-210ENST00000574322 UGT2B28Q9BY64 529 aa27.09■■□□□ 1.93
CTDNEP1-210ENST00000574322 AASDHPPTQ9NRN7 309 aa27.09■■□□□ 1.93
CTDNEP1-210ENST00000574322 DCAF13Q9NV06 445 aaKnown RBP27.09■■□□□ 1.93
CTDNEP1-210ENST00000574322 CACNA1IQ9P0X4 2223 aa27.09■■□□□ 1.93
CTDNEP1-210ENST00000574322 NUP214P35658 2090 aaPredicted RBP27.08■■□□□ 1.93
CTDNEP1-210ENST00000574322 A0A1W2PR77 199 aa27.08■■□□□ 1.93
CTDNEP1-210ENST00000574322 TDGF1P13385 188 aa27.08■■□□□ 1.93
CTDNEP1-210ENST00000574322 PRSS53Q2L4Q9 553 aa27.08■■□□□ 1.93
CTDNEP1-210ENST00000574322 IRGCQ6NXR0 463 aa27.08■■□□□ 1.93
CTDNEP1-210ENST00000574322 OR4A15Q8NGL6 344 aa27.08■■□□□ 1.93
CTDNEP1-210ENST00000574322 MS4A6EQ96DS6 147 aa27.08■■□□□ 1.93
CTDNEP1-210ENST00000574322 SLC6A16Q9GZN6 736 aa27.08■■□□□ 1.93
CTDNEP1-210ENST00000574322 CHST8Q9H2A9 424 aa27.08■■□□□ 1.93
CTDNEP1-210ENST00000574322 MIEF1Q9NQG6 463 aa27.08■■□□□ 1.93
CTDNEP1-210ENST00000574322 ANKMY1Q9P2S6 941 aa27.08■■□□□ 1.93
CTDNEP1-210ENST00000574322 PCDHGB4Q9UN71 923 aa27.08■■□□□ 1.93
CTDNEP1-210ENST00000574322 ENTPD2Q9Y5L3 495 aa27.08■■□□□ 1.93
CTDNEP1-210ENST00000574322 OR2A25A4D2G3 310 aa27.07■■□□□ 1.92
CTDNEP1-210ENST00000574322 RAP2AP10114 183 aa27.07■■□□□ 1.92
CTDNEP1-210ENST00000574322 TSFMP43897 325 aaKnown RBP27.07■■□□□ 1.92
CTDNEP1-210ENST00000574322 HSPA13P48723 471 aa27.07■■□□□ 1.92
CTDNEP1-210ENST00000574322 RPS15AP62244 130 aaKnown RBP27.07■■□□□ 1.92
CTDNEP1-210ENST00000574322 HBA1P69905 142 aa27.07■■□□□ 1.92
CTDNEP1-210ENST00000574322 RELAQ04206 551 aa27.07■■□□□ 1.92
CTDNEP1-210ENST00000574322 PLCL1Q15111 1095 aa27.07■■□□□ 1.92
CTDNEP1-210ENST00000574322 ATP6AP1Q15904 470 aa27.07■■□□□ 1.92
CTDNEP1-210ENST00000574322 FAM98BQ52LJ0 330 aaKnown RBP27.07■■□□□ 1.92
CTDNEP1-210ENST00000574322 TAF8Q7Z7C8 310 aa27.07■■□□□ 1.92
CTDNEP1-210ENST00000574322 RBM12BQ8IXT5 1001 aaKnown RBP27.07■■□□□ 1.92
CTDNEP1-210ENST00000574322 NAGSQ8N159 534 aa27.07■■□□□ 1.92
CTDNEP1-210ENST00000574322 TEFMQ96QE5 360 aaKnown RBP27.07■■□□□ 1.92
CTDNEP1-210ENST00000574322 TAS2R7Q9NYW3 318 aa27.07■■□□□ 1.92
CTDNEP1-210ENST00000574322 TMPRSS11DO60235 418 aa27.07■■□□□ 1.92
CTDNEP1-210ENST00000574322 CTSEP14091 401 aa27.07■■□□□ 1.92
CTDNEP1-210ENST00000574322 EFNA1P20827 205 aaPredicted RBP27.07■■□□□ 1.92
CTDNEP1-210ENST00000574322 CCT8P50990 548 aa27.07■■□□□ 1.92
CTDNEP1-210ENST00000574322 GAB1Q13480 694 aa27.07■■□□□ 1.92
CTDNEP1-210ENST00000574322 ANGPT1Q15389 498 aa27.07■■□□□ 1.92
CTDNEP1-210ENST00000574322 ZZZ3Q8IYH5 903 aa27.07■■□□□ 1.92
CTDNEP1-210ENST00000574322 SRFBP1Q8NEF9 429 aaKnown RBP27.07■■□□□ 1.92
CTDNEP1-210ENST00000574322 CHID1Q9BWS9 393 aa27.07■■□□□ 1.92
CTDNEP1-210ENST00000574322 CAAP1Q9H8G2 361 aa27.07■■□□□ 1.92
CTDNEP1-210ENST00000574322 TAS2R9Q9NYW1 312 aa27.07■■□□□ 1.92
CTDNEP1-210ENST00000574322 CCDC163A0A0D9SF12 145 aa27.06■■□□□ 1.92
CTDNEP1-210ENST00000574322 C6orf47O95873 294 aa27.06■■□□□ 1.92
CTDNEP1-210ENST00000574322 C1QCP02747 245 aa27.06■■□□□ 1.92
CTDNEP1-210ENST00000574322 HOXB3P14651 431 aaPredicted RBP27.06■■□□□ 1.92
CTDNEP1-210ENST00000574322 FNTBP49356 437 aa27.06■■□□□ 1.92
CTDNEP1-210ENST00000574322 NUBP1P53384 320 aa27.06■■□□□ 1.92
CTDNEP1-210ENST00000574322 VMACQ2NL98 169 aa27.06■■□□□ 1.92
CTDNEP1-210ENST00000574322 ZNF542PQ5EBM4 170 aa27.06■■□□□ 1.92
CTDNEP1-210ENST00000574322 INTS11Q5TA45 600 aaKnown RBP27.06■■□□□ 1.92
CTDNEP1-210ENST00000574322 ABHD17CQ6PCB6 329 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms