RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 FBXL8Q96CD0 374 aa14.68□□□□□ -0.06
HERPUD1-215ENST00000568676 LINGO1Q96FE5 620 aa14.68□□□□□ -0.06
HERPUD1-215ENST00000568676 SEC16BQ96JE7 1060 aa14.68□□□□□ -0.06
HERPUD1-215ENST00000568676 AIF1LQ9BQI0 150 aa14.68□□□□□ -0.06
HERPUD1-215ENST00000568676 PELI2Q9HAT8 420 aa14.68□□□□□ -0.06
HERPUD1-215ENST00000568676 ZFATQ9P243 1243 aa14.68□□□□□ -0.06
HERPUD1-215ENST00000568676 FBXW2Q9UKT8 454 aa14.68□□□□□ -0.06
HERPUD1-215ENST00000568676 ERVK-11Q9UQG0 969 aa14.68□□□□□ -0.06
HERPUD1-215ENST00000568676 HCFC1P51610 2035 aa14.67□□□□□ -0.06
HERPUD1-215ENST00000568676 A8MVJ9 347 aa14.67□□□□□ -0.06
HERPUD1-215ENST00000568676 FAM47E-STBD1D6RA91 191 aa14.67□□□□□ -0.06
HERPUD1-215ENST00000568676 CLDN4O14493 209 aa14.67□□□□□ -0.06
HERPUD1-215ENST00000568676 ZFAND5O76080 213 aa14.67□□□□□ -0.06
HERPUD1-215ENST00000568676 MYO1DO94832 1006 aa14.67□□□□□ -0.06
HERPUD1-215ENST00000568676 NADKO95544 446 aaPredicted RBP14.67□□□□□ -0.06
HERPUD1-215ENST00000568676 SERPINA6P08185 405 aa14.67□□□□□ -0.06
HERPUD1-215ENST00000568676 SMIM10L1P0DMW3 83 aa14.67□□□□□ -0.06
HERPUD1-215ENST00000568676 RFC3P40938 356 aa14.67□□□□□ -0.06
HERPUD1-215ENST00000568676 VPS41P49754 854 aa14.67□□□□□ -0.06
HERPUD1-215ENST00000568676 HSD17B7P56937 341 aa14.67□□□□□ -0.06
HERPUD1-215ENST00000568676 PMPCAQ10713 525 aa14.67□□□□□ -0.06
HERPUD1-215ENST00000568676 TRIP13Q15645 432 aaPredicted RBP14.67□□□□□ -0.06
HERPUD1-215ENST00000568676 EMC4Q5J8M3 183 aa14.67□□□□□ -0.06
HERPUD1-215ENST00000568676 NDUFAF5Q5TEU4 345 aa14.67□□□□□ -0.06
HERPUD1-215ENST00000568676 ANKRD22Q5VYY1 191 aa14.67□□□□□ -0.06
HERPUD1-215ENST00000568676 PAQR3Q6TCH7 311 aa14.67□□□□□ -0.06
HERPUD1-215ENST00000568676 MDGA2Q7Z553 956 aa14.67□□□□□ -0.06
HERPUD1-215ENST00000568676 SLC22A16Q86VW1 577 aa14.67□□□□□ -0.06
HERPUD1-215ENST00000568676 OR52N2Q8NGI0 321 aa14.67□□□□□ -0.06
HERPUD1-215ENST00000568676 OR5M3Q8NGP4 307 aa14.67□□□□□ -0.06
HERPUD1-215ENST00000568676 NEIL2Q969S2 332 aa14.67□□□□□ -0.06
HERPUD1-215ENST00000568676 PYCR2Q96C36 320 aa14.67□□□□□ -0.06
HERPUD1-215ENST00000568676 SMIM10Q96HG1 83 aa14.67□□□□□ -0.06
HERPUD1-215ENST00000568676 OR4K3Q96R72 315 aa14.67□□□□□ -0.06
HERPUD1-215ENST00000568676 NPLQ9BXD5 320 aaPredicted RBP14.67□□□□□ -0.06
HERPUD1-215ENST00000568676 UCK2Q9BZX2 261 aa14.67□□□□□ -0.06
HERPUD1-215ENST00000568676 ZDHHC11Q9H8X9 412 aa14.67□□□□□ -0.06
HERPUD1-215ENST00000568676 NECTIN3Q9NQS3 549 aa14.67□□□□□ -0.06
HERPUD1-215ENST00000568676 HPF1Q9NWY4 346 aa14.67□□□□□ -0.06
HERPUD1-215ENST00000568676 A0A088AWK7 358 aa14.66□□□□□ -0.06
HERPUD1-215ENST00000568676 DNAJB6O75190 326 aa14.66□□□□□ -0.06
HERPUD1-215ENST00000568676 FAM155BO75949 473 aa14.66□□□□□ -0.06
HERPUD1-215ENST00000568676 TTC4O95801 387 aa14.66□□□□□ -0.06
HERPUD1-215ENST00000568676 F7P08709 466 aaPredicted RBP14.66□□□□□ -0.06
HERPUD1-215ENST00000568676 ZNF10P21506 573 aaPredicted RBP14.66□□□□□ -0.06
HERPUD1-215ENST00000568676 ACVR2AP27037 513 aa14.66□□□□□ -0.06
HERPUD1-215ENST00000568676 GSTM2P28161 218 aa14.66□□□□□ -0.06
HERPUD1-215ENST00000568676 HPDP32754 393 aaPredicted RBP14.66□□□□□ -0.06
HERPUD1-215ENST00000568676 TERF1P54274 439 aa14.66□□□□□ -0.06
HERPUD1-215ENST00000568676 NUP107P57740 925 aa14.66□□□□□ -0.06
HERPUD1-215ENST00000568676 GPR85P60893 370 aa14.66□□□□□ -0.06
HERPUD1-215ENST00000568676 RAB8AP61006 207 aa14.66□□□□□ -0.06
HERPUD1-215ENST00000568676 STXBP1P61764 594 aaKnown RBP14.66□□□□□ -0.06
HERPUD1-215ENST00000568676 PPIAP62937 165 aaKnown RBP14.66□□□□□ -0.06
HERPUD1-215ENST00000568676 REEP5Q00765 189 aa14.66□□□□□ -0.06
HERPUD1-215ENST00000568676 TIAL1Q01085 375 aaKnown RBP eCLIP14.66□□□□□ -0.065e-7■■■■□ 24.5
HERPUD1-215ENST00000568676 GXYLT1Q4G148 440 aa14.66□□□□□ -0.06
HERPUD1-215ENST00000568676 CATSPEREQ5SY80 951 aa14.66□□□□□ -0.06
HERPUD1-215ENST00000568676 ZNF662Q6ZS27 426 aa14.66□□□□□ -0.06
HERPUD1-215ENST00000568676 GK5Q6ZS86 529 aa14.66□□□□□ -0.06
HERPUD1-215ENST00000568676 GALNT7Q86SF2 657 aa14.66□□□□□ -0.06
HERPUD1-215ENST00000568676 SCUBE1Q8IWY4 988 aa14.66□□□□□ -0.06
HERPUD1-215ENST00000568676 CA13Q8N1Q1 262 aa14.66□□□□□ -0.06
HERPUD1-215ENST00000568676 TRIM58Q8NG06 486 aa14.66□□□□□ -0.06
HERPUD1-215ENST00000568676 TTLQ8NG68 377 aa14.66□□□□□ -0.06
HERPUD1-215ENST00000568676 PDLIM2Q96JY6 352 aa14.66□□□□□ -0.06
HERPUD1-215ENST00000568676 SIGLEC10Q96LC7 697 aa14.66□□□□□ -0.06
HERPUD1-215ENST00000568676 NDNQ99608 321 aa14.66□□□□□ -0.06
HERPUD1-215ENST00000568676 IARS2Q9NSE4 1012 aaKnown RBP14.66□□□□□ -0.06
HERPUD1-215ENST00000568676 CORO1CQ9ULV4 474 aaPredicted RBP14.66□□□□□ -0.06
HERPUD1-215ENST00000568676 MRPS33Q9Y291 106 aaKnown RBP14.66□□□□□ -0.06
HERPUD1-215ENST00000568676 DYRK1BQ9Y463 629 aa14.66□□□□□ -0.06
HERPUD1-215ENST00000568676 KCNE2Q9Y6J6 123 aa14.66□□□□□ -0.06
HERPUD1-215ENST00000568676 A8MUA0 341 aa14.65□□□□□ -0.06
HERPUD1-215ENST00000568676 GOLGA6L6A8MZA4 724 aa14.65□□□□□ -0.06
HERPUD1-215ENST00000568676 PDE9AO76083 593 aa14.65□□□□□ -0.06
HERPUD1-215ENST00000568676 B3GALT4O96024 378 aa14.65□□□□□ -0.06
HERPUD1-215ENST00000568676 IGHG3P01860 377 aa14.65□□□□□ -0.06
HERPUD1-215ENST00000568676 PGAM1P18669 254 aa14.65□□□□□ -0.06
HERPUD1-215ENST00000568676 CDC25BP30305 580 aa14.65□□□□□ -0.06
HERPUD1-215ENST00000568676 ZFP36L2P47974 494 aaKnown RBP14.65□□□□□ -0.06
HERPUD1-215ENST00000568676 GPR143P51810 404 aa14.65□□□□□ -0.06
HERPUD1-215ENST00000568676 IST1P53990 364 aa14.65□□□□□ -0.06
HERPUD1-215ENST00000568676 PPP2R2AP63151 447 aa14.65□□□□□ -0.06
HERPUD1-215ENST00000568676 PLGLB1Q02325 96 aa14.65□□□□□ -0.06
HERPUD1-215ENST00000568676 HYAL2Q12891 473 aa14.65□□□□□ -0.06
HERPUD1-215ENST00000568676 PDAP1Q13442 181 aaKnown RBP14.65□□□□□ -0.06
HERPUD1-215ENST00000568676 HECTD2Q5U5R9 776 aa14.65□□□□□ -0.06
HERPUD1-215ENST00000568676 B3GNT6Q6ZMB0 384 aa14.65□□□□□ -0.06
HERPUD1-215ENST00000568676 TGIF2LYQ8IUE0 185 aa14.65□□□□□ -0.06
HERPUD1-215ENST00000568676 CCDC71Q8IV32 467 aaPredicted RBP14.65□□□□□ -0.06
HERPUD1-215ENST00000568676 TMEM132CQ8N3T6 1108 aa14.65□□□□□ -0.06
HERPUD1-215ENST00000568676 ANKRD53Q8N9V6 530 aa14.65□□□□□ -0.06
HERPUD1-215ENST00000568676 C7orf57Q8NEG2 295 aa14.65□□□□□ -0.06
HERPUD1-215ENST00000568676 OR2M7Q8NG81 312 aa14.65□□□□□ -0.06
HERPUD1-215ENST00000568676 ASB15Q8WXK1 588 aa14.65□□□□□ -0.06
HERPUD1-215ENST00000568676 GAL3ST3Q96A11 431 aa14.65□□□□□ -0.06
HERPUD1-215ENST00000568676 PDLIM5Q96HC4 596 aaKnown RBP14.65□□□□□ -0.06
HERPUD1-215ENST00000568676 FAR2Q96K12 515 aa14.65□□□□□ -0.06
HERPUD1-215ENST00000568676 NAT9Q9BTE0 207 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms