RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 PAGE2BQ5JRK9 111 aa6.91□□□□□ -1.3
SCFD1-222ENST00000556768 CDKL4Q5MAI5 379 aa6.91□□□□□ -1.3
SCFD1-222ENST00000556768 PLAG1Q6DJT9 500 aa6.91□□□□□ -1.3
SCFD1-222ENST00000556768 SULT1C3Q6IMI6 304 aa6.91□□□□□ -1.3
SCFD1-222ENST00000556768 C8orf74Q6P047 294 aa6.91□□□□□ -1.3
SCFD1-222ENST00000556768 TMEM207Q6UWW9 146 aa6.91□□□□□ -1.3
SCFD1-222ENST00000556768 TMIGD1Q6UXZ0 262 aa6.91□□□□□ -1.3
SCFD1-222ENST00000556768 CCDC91Q7Z6B0 441 aa6.91□□□□□ -1.3
SCFD1-222ENST00000556768 CUZD1Q86UP6 607 aa6.91□□□□□ -1.3
SCFD1-222ENST00000556768 SPNS2Q8IVW8 549 aa6.91□□□□□ -1.3
SCFD1-222ENST00000556768 CEP97Q8IW35 865 aa6.91□□□□□ -1.3
SCFD1-222ENST00000556768 PPM1NQ8N819 430 aa6.91□□□□□ -1.3
SCFD1-222ENST00000556768 BCORP1Q8N888 145 aa6.91□□□□□ -1.3
SCFD1-222ENST00000556768 MNS1Q8NEH6 495 aa6.91□□□□□ -1.3
SCFD1-222ENST00000556768 FBXO25Q8TCJ0 367 aa6.91□□□□□ -1.3
SCFD1-222ENST00000556768 CCT6BQ92526 530 aa6.91□□□□□ -1.3
SCFD1-222ENST00000556768 C19orf60Q96EN9 201 aa6.91□□□□□ -1.3
SCFD1-222ENST00000556768 PEX11GQ96HA9 241 aa6.91□□□□□ -1.3
SCFD1-222ENST00000556768 ZNF354BQ96LW1 612 aa6.91□□□□□ -1.3
SCFD1-222ENST00000556768 OR4K3Q96R72 315 aa6.91□□□□□ -1.3
SCFD1-222ENST00000556768 RBBP8Q99708 897 aa6.91□□□□□ -1.3
SCFD1-222ENST00000556768 WDR83Q9BRX9 315 aaKnown RBP6.91□□□□□ -1.3
SCFD1-222ENST00000556768 NMRAL1Q9HBL8 299 aa6.91□□□□□ -1.3
SCFD1-222ENST00000556768 GPRC5BQ9NZH0 403 aa6.91□□□□□ -1.3
SCFD1-222ENST00000556768 CD274Q9NZQ7 290 aa6.91□□□□□ -1.3
SCFD1-222ENST00000556768 MTRF1LQ9UGC7 380 aaKnown RBP6.91□□□□□ -1.3
SCFD1-222ENST00000556768 RNF112Q9ULX5 631 aa6.91□□□□□ -1.3
SCFD1-222ENST00000556768 MTO1Q9Y2Z2 717 aaKnown RBP6.91□□□□□ -1.3
SCFD1-222ENST00000556768 IKBKGQ9Y6K9 419 aa6.91□□□□□ -1.3
SCFD1-222ENST00000556768 FAM159BA6NKW6 160 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 MAGEB17A8MXT2 336 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 CLDN4O14493 209 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 GALR3O60755 368 aaPredicted RBP6.9□□□□□ -1.3
SCFD1-222ENST00000556768 JRKO75564 520 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 STK16O75716 305 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 PIAS1O75925 651 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 SEC24DO94855 1032 aaPredicted RBP6.9□□□□□ -1.3
SCFD1-222ENST00000556768 CBX6O95503 412 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 DDAH2O95865 285 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 TUBB4AP04350 444 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 ZNF888P0CJ79 500 aaPredicted RBP6.9□□□□□ -1.3
SCFD1-222ENST00000556768 C1GALT1C1LP0DN25 315 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 RNH1P13489 461 aaKnown RBP6.9□□□□□ -1.3
SCFD1-222ENST00000556768 NME2P22392 152 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 UQCRFS1P47985 274 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 TNFSF10P50591 281 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 OR4D2P58180 307 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 Q0VFX4 171 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 LAPTM5Q13571 262 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 SLMAPQ14BN4 828 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 FAM83EQ2M2I3 478 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 KBTBD12Q3ZCT8 623 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 PRR30Q53SZ7 412 aaPredicted RBP6.9□□□□□ -1.3
SCFD1-222ENST00000556768 RPUSD3Q6P087 351 aaKnown RBP6.9□□□□□ -1.3
SCFD1-222ENST00000556768 KLC3Q6P597 504 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 PRSS41Q7RTY9 318 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 TMEM151BQ8IW70 566 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 SLC5A8Q8N695 610 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 PLPP5Q8NEB5 264 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 NT5CQ8TCD5 201 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 SSC4DQ8WTU2 575 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 ANKRD49Q8WVL7 239 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 FAR1Q8WVX9 515 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 GAL3ST3Q96A11 431 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 RHBDF1Q96CC6 855 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 C5orf34Q96MH7 638 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 PTCHD1Q96NR3 888 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 GPR22Q99680 433 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 CLEC4MQ9H2X3 399 aaPredicted RBP6.9□□□□□ -1.3
SCFD1-222ENST00000556768 EHD1Q9H4M9 534 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 SYNPO2LQ9H987 977 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 CAB39LQ9H9S4 337 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 KCNK13Q9HB14 408 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 DNAJC11Q9NVH1 559 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 PFDN2Q9UHV9 154 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 SH2B3Q9UQQ2 575 aa6.9□□□□□ -1.3
SCFD1-222ENST00000556768 MRPS33Q9Y291 106 aaKnown RBP6.9□□□□□ -1.3
SCFD1-222ENST00000556768 USP9YO00507 2555 aaPredicted RBP6.9□□□□□ -1.3
SCFD1-222ENST00000556768 SYNDIG1LA6NDD5 238 aa6.9□□□□□ -1.31
SCFD1-222ENST00000556768 ZNF860A6NHJ4 632 aa6.9□□□□□ -1.31
SCFD1-222ENST00000556768 SYCE1LA8MT33 242 aa6.9□□□□□ -1.31
SCFD1-222ENST00000556768 PHGDHO43175 533 aaKnown RBP6.9□□□□□ -1.31
SCFD1-222ENST00000556768 CHST10O43529 356 aa6.9□□□□□ -1.31
SCFD1-222ENST00000556768 B4GALT2O60909 372 aa6.9□□□□□ -1.31
SCFD1-222ENST00000556768 ATE1O95260 518 aa6.9□□□□□ -1.31
SCFD1-222ENST00000556768 MLYCDO95822 493 aa6.9□□□□□ -1.31
SCFD1-222ENST00000556768 BPNT1O95861 308 aa6.9□□□□□ -1.31
SCFD1-222ENST00000556768 CRYABP02511 175 aaKnown RBP6.9□□□□□ -1.31
SCFD1-222ENST00000556768 GP1BBP13224 206 aa6.9□□□□□ -1.31
SCFD1-222ENST00000556768 GGT5P36269 586 aa6.9□□□□□ -1.31
SCFD1-222ENST00000556768 GDF5P43026 501 aa6.9□□□□□ -1.31
SCFD1-222ENST00000556768 RAB8AP61006 207 aa6.9□□□□□ -1.31
SCFD1-222ENST00000556768 PRR20EP86478 221 aa6.9□□□□□ -1.31
SCFD1-222ENST00000556768 PRR20CP86479 221 aa6.9□□□□□ -1.31
SCFD1-222ENST00000556768 PRR20DP86480 221 aa6.9□□□□□ -1.31
SCFD1-222ENST00000556768 PRR20BP86481 221 aa6.9□□□□□ -1.31
SCFD1-222ENST00000556768 PRR20AP86496 221 aa6.9□□□□□ -1.31
SCFD1-222ENST00000556768 MRPL49Q13405 166 aaKnown RBP6.9□□□□□ -1.31
SCFD1-222ENST00000556768 PCOLCEQ15113 449 aa6.9□□□□□ -1.31
SCFD1-222ENST00000556768 INAQ16352 499 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 203.8 ms