RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 CLK4Q9HAZ1 481 aaKnown RBP7.28□□□□□ -1.24
TDP1-209ENST00000554180 FAM60AQ9NP50 221 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 SLC52A3Q9NQ40 469 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 PRDM9Q9NQV7 894 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 ATAD3AQ9NVI7 634 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.28□□□□□ -1.24
TDP1-209ENST00000554180 LYARQ9NX58 379 aaKnown RBP7.28□□□□□ -1.24
TDP1-209ENST00000554180 NDUFAF1Q9Y375 327 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 FRYLO94915 3013 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 RIF1Q5UIP0 2472 aaKnown RBP7.28□□□□□ -1.24
TDP1-209ENST00000554180 MYO15AQ9UKN7 3530 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 GVINP1Q7Z2Y8 2422 aa7.28□□□□□ -1.24
TDP1-209ENST00000554180 LOC100653049A0A140TA62 436 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 CCDC154A6NI56 674 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 C4orf51C9J302 202 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 PROB1E7EW31 1015 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 RTCAO00442 366 aaKnown RBP7.27□□□□□ -1.25
TDP1-209ENST00000554180 PRAMEF10O60809 474 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 CBFA2T3O75081 653 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 KRT34O76011 436 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 NPPAP01160 153 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 PGRP06401 933 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 KRT16P08779 473 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 ZNF888P0CJ79 500 aaPredicted RBP7.27□□□□□ -1.25
TDP1-209ENST00000554180 COX7A2P14406 83 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 DRD2P14416 443 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 ALOX12P18054 663 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 DDCP20711 480 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 CAPN3P20807 821 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 ATP5A1P25705 553 aaKnown RBP7.27□□□□□ -1.25
TDP1-209ENST00000554180 IL12AP29459 219 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 KIR3DL1P43629 444 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 HNRNPFP52597 415 aaKnown RBP7.27□□□□□ -1.25
TDP1-209ENST00000554180 NME5P56597 212 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 TAS2R50P59544 299 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 CCL7P80098 99 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 ACY1Q03154 408 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 KLC1Q07866 573 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 FOXM1Q08050 763 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 FAM53BQ14153 422 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 SPIDRQ14159 915 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 SLC9A5Q14940 896 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 HEPACAMQ14CZ8 416 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 HKDC1Q2TB90 917 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 FAM174BQ3ZCQ3 159 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 MMEL1Q495T6 779 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 VPS26BQ4G0F5 336 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 AASDHQ4L235 1098 aaPredicted RBP7.27□□□□□ -1.25
TDP1-209ENST00000554180 WASHC2DQ5SRD0 308 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 YOD1Q5VVQ6 348 aaPredicted RBP7.27□□□□□ -1.25
TDP1-209ENST00000554180 REP15Q6BDI9 236 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 MRM1Q6IN84 353 aaKnown RBP7.27□□□□□ -1.25
TDP1-209ENST00000554180 FAM71E1Q6IPT2 247 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 CYB5D1Q6P9G0 228 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 C16orf89Q6UX73 402 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 ZNF793Q6ZN11 406 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 ASRGL1Q7L266 308 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 SLITRK4Q8IW52 837 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 TMEM132CQ8N3T6 1108 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 ARHGEF39Q8N4T4 335 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 DPP10Q8N608 796 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 KRTCAP2Q8N6L1 136 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 ACOT4Q8N9L9 421 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 KCT2Q8NC54 265 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 OR8J2Q8NGG1 315 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 OR8K5Q8NH50 307 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 CLHC1Q8NHS4 586 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 C16orf78Q8WTQ4 265 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 N4BP2L2Q92802 583 aaPredicted RBP7.27□□□□□ -1.25
TDP1-209ENST00000554180 KLHL29Q96CT2 875 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 SLC7A6OSQ96CW6 309 aaPredicted RBP7.27□□□□□ -1.25
TDP1-209ENST00000554180 RCN3Q96D15 328 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 EGLN2Q96KS0 407 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 TEFMQ96QE5 360 aaKnown RBP7.27□□□□□ -1.25
TDP1-209ENST00000554180 GFM1Q96RP9 751 aaKnown RBP7.27□□□□□ -1.25
TDP1-209ENST00000554180 SERINC2Q96SA4 455 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 BTBD10Q9BSF8 475 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 FAIM2Q9BWQ8 316 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 NPLQ9BXD5 320 aaPredicted RBP7.27□□□□□ -1.25
TDP1-209ENST00000554180 KLHL31Q9H511 634 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 REEP4Q9H6H4 257 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 FANCEQ9HB96 536 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 MIEF1Q9NQG6 463 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 PRDM7Q9NQW5 492 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 FAM120CQ9NX05 1096 aaKnown RBP7.27□□□□□ -1.25
TDP1-209ENST00000554180 MS4A12Q9NXJ0 267 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 EHD3Q9NZN3 535 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 TMEM9Q9P0T7 183 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 KLHL3Q9UH77 587 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 BAIAP2L1Q9UHR4 511 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 ATP6V1HQ9UI12 483 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 PHF11Q9UIL8 331 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 LEF1Q9UJU2 399 aaPredicted RBP7.27□□□□□ -1.25
TDP1-209ENST00000554180 RP1P56715 2156 aa7.27□□□□□ -1.25
TDP1-209ENST00000554180 ASCC3Q8N3C0 2202 aaKnown RBP7.26□□□□□ -1.25
TDP1-209ENST00000554180 UNC13CQ8NB66 2214 aa7.26□□□□□ -1.25
TDP1-209ENST00000554180 IGHV5-10-1A0A0J9YXX1 117 aa7.26□□□□□ -1.25
TDP1-209ENST00000554180 C1orf226A1L170 272 aa7.26□□□□□ -1.25
TDP1-209ENST00000554180 CFAP73A6NFT4 308 aa7.26□□□□□ -1.25
TDP1-209ENST00000554180 B2RBV5 119 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms