RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 TICAM1Q8IUC6 712 aa14.64□□□□□ -0.07
VPS33A-206ENST00000542310 SCUBE1Q8IWY4 988 aa14.64□□□□□ -0.07
VPS33A-206ENST00000542310 MS4A6EQ96DS6 147 aa14.64□□□□□ -0.07
VPS33A-206ENST00000542310 WDR34Q96EX3 536 aa14.64□□□□□ -0.07
VPS33A-206ENST00000542310 FAR2Q96K12 515 aa14.64□□□□□ -0.07
VPS33A-206ENST00000542310 GPR137Q96N19 417 aa14.64□□□□□ -0.07
VPS33A-206ENST00000542310 FRMD6Q96NE9 622 aa14.64□□□□□ -0.07
VPS33A-206ENST00000542310 DPH5Q9H2P9 285 aa14.64□□□□□ -0.07
VPS33A-206ENST00000542310 DNAJC11Q9NVH1 559 aa14.64□□□□□ -0.07
VPS33A-206ENST00000542310 GRHL1Q9NZI5 618 aa14.64□□□□□ -0.07
VPS33A-206ENST00000542310 LRFN1Q9P244 771 aa14.64□□□□□ -0.07
VPS33A-206ENST00000542310 PPIEQ9UNP9 301 aaKnown RBP14.64□□□□□ -0.07
VPS33A-206ENST00000542310 ENTPD4Q9Y227 616 aa14.64□□□□□ -0.07
VPS33A-206ENST00000542310 MTO1Q9Y2Z2 717 aaKnown RBP14.64□□□□□ -0.07
VPS33A-206ENST00000542310 CELSR2Q9HCU4 2923 aa14.64□□□□□ -0.07
VPS33A-206ENST00000542310 LRIT2A6NDA9 550 aa14.63□□□□□ -0.07
VPS33A-206ENST00000542310 CXorf49A8MYA2 514 aaPredicted RBP14.63□□□□□ -0.07
VPS33A-206ENST00000542310 FCHO1O14526 889 aa14.63□□□□□ -0.07
VPS33A-206ENST00000542310 CLGNO14967 610 aa14.63□□□□□ -0.07
VPS33A-206ENST00000542310 ERI3O43414 337 aaKnown RBP14.63□□□□□ -0.07
VPS33A-206ENST00000542310 MAN1A2O60476 641 aa14.63□□□□□ -0.07
VPS33A-206ENST00000542310 C1QAP02745 245 aa14.63□□□□□ -0.07
VPS33A-206ENST00000542310 CCDC166P0CW27 439 aa14.63□□□□□ -0.07
VPS33A-206ENST00000542310 TPP2P29144 1249 aaPredicted RBP14.63□□□□□ -0.07
VPS33A-206ENST00000542310 HNRNPH1P31943 449 aaKnown RBP14.63□□□□□ -0.07
VPS33A-206ENST00000542310 TRHRP34981 398 aaPredicted RBP14.63□□□□□ -0.07
VPS33A-206ENST00000542310 GDF5P43026 501 aa14.63□□□□□ -0.07
VPS33A-206ENST00000542310 CASP6P55212 293 aa14.63□□□□□ -0.07
VPS33A-206ENST00000542310 HSD17B7P56937 341 aa14.63□□□□□ -0.07
VPS33A-206ENST00000542310 RAB38P57729 211 aa14.63□□□□□ -0.07
VPS33A-206ENST00000542310 MLF1P58340 268 aa14.63□□□□□ -0.07
VPS33A-206ENST00000542310 RAB10P61026 200 aa14.63□□□□□ -0.07
VPS33A-206ENST00000542310 BTG2P78543 158 aa14.63□□□□□ -0.07
VPS33A-206ENST00000542310 OC90Q02509 493 aaPredicted RBP14.63□□□□□ -0.07
VPS33A-206ENST00000542310 NAB1Q13506 487 aa14.63□□□□□ -0.07
VPS33A-206ENST00000542310 PDK4Q16654 411 aa14.63□□□□□ -0.07
VPS33A-206ENST00000542310 KRTCAP3Q53RY4 240 aa14.63□□□□□ -0.07
VPS33A-206ENST00000542310 TRIM40Q6P9F5 258 aa14.63□□□□□ -0.07
VPS33A-206ENST00000542310 LRRC70Q7Z2Q7 622 aa14.63□□□□□ -0.07
VPS33A-206ENST00000542310 KIF2BQ8N4N8 673 aa14.63□□□□□ -0.07
VPS33A-206ENST00000542310 NFAM1Q8NET5 270 aaPredicted RBP14.63□□□□□ -0.07
VPS33A-206ENST00000542310 OR2L5Q8NG80 312 aa14.63□□□□□ -0.07
VPS33A-206ENST00000542310 KIAA1191Q96A73 305 aa14.63□□□□□ -0.07
VPS33A-206ENST00000542310 PTCD3Q96EY7 689 aaKnown RBP14.63□□□□□ -0.07
VPS33A-206ENST00000542310 UBXN10Q96LJ8 280 aa14.63□□□□□ -0.07
VPS33A-206ENST00000542310 EFCAB11Q9BUY7 163 aa14.63□□□□□ -0.07
VPS33A-206ENST00000542310 RAB17Q9H0T7 212 aa14.63□□□□□ -0.07
VPS33A-206ENST00000542310 CDCP1Q9H5V8 836 aa14.63□□□□□ -0.07
VPS33A-206ENST00000542310 CAB39LQ9H9S4 337 aa14.63□□□□□ -0.07
VPS33A-206ENST00000542310 NECTIN3Q9NQS3 549 aa14.63□□□□□ -0.07
VPS33A-206ENST00000542310 MRPS33Q9Y291 106 aaKnown RBP14.63□□□□□ -0.07
VPS33A-206ENST00000542310 UTP11Q9Y3A2 253 aaKnown RBP14.63□□□□□ -0.07
VPS33A-206ENST00000542310 KLF2Q9Y5W3 355 aaPredicted RBP14.63□□□□□ -0.07
VPS33A-206ENST00000542310 CENPEQ02224 2701 aa14.62□□□□□ -0.07
VPS33A-206ENST00000542310 TRGV8A0A0C4DH27 118 aa14.62□□□□□ -0.07
VPS33A-206ENST00000542310 ANKDD1BA6NHY2 528 aa14.62□□□□□ -0.07
VPS33A-206ENST00000542310 NCF1BA6NI72 391 aaPredicted RBP14.62□□□□□ -0.07
VPS33A-206ENST00000542310 NCF1CA8MVU1 366 aaPredicted RBP14.62□□□□□ -0.07
VPS33A-206ENST00000542310 TAPBPO15533 448 aa14.62□□□□□ -0.07
VPS33A-206ENST00000542310 PHGDHO43175 533 aaKnown RBP14.62□□□□□ -0.07
VPS33A-206ENST00000542310 B3GALT2O43825 422 aa14.62□□□□□ -0.07
VPS33A-206ENST00000542310 NME2P1O60361 137 aa14.62□□□□□ -0.07
VPS33A-206ENST00000542310 SLC19A2O60779 497 aa14.62□□□□□ -0.07
VPS33A-206ENST00000542310 STK16O75716 305 aa14.62□□□□□ -0.07
VPS33A-206ENST00000542310 SLC25A12O75746 678 aa14.62□□□□□ -0.07
VPS33A-206ENST00000542310 SP1P08047 785 aa14.62□□□□□ -0.07
VPS33A-206ENST00000542310 NCF1P14598 390 aaPredicted RBP14.62□□□□□ -0.07
VPS33A-206ENST00000542310 TFEBP19484 476 aa14.62□□□□□ -0.07
VPS33A-206ENST00000542310 NME2P22392 152 aa14.62□□□□□ -0.07
VPS33A-206ENST00000542310 STX2P32856 288 aa14.62□□□□□ -0.07
VPS33A-206ENST00000542310 SPRP35270 261 aaPredicted RBP14.62□□□□□ -0.07
VPS33A-206ENST00000542310 BTN3A2P78410 334 aa14.62□□□□□ -0.07
VPS33A-206ENST00000542310 ALDH6A1Q02252 535 aaKnown RBP14.62□□□□□ -0.07
VPS33A-206ENST00000542310 TGM3Q08188 693 aa14.62□□□□□ -0.07
VPS33A-206ENST00000542310 C2orf54Q08AI8 447 aa14.62□□□□□ -0.07
VPS33A-206ENST00000542310 ART3Q13508 389 aa14.62□□□□□ -0.07
VPS33A-206ENST00000542310 LAPTM5Q13571 262 aa14.62□□□□□ -0.07
VPS33A-206ENST00000542310 E2F2Q14209 437 aa14.62□□□□□ -0.07
VPS33A-206ENST00000542310 RCN2Q14257 317 aa14.62□□□□□ -0.07
VPS33A-206ENST00000542310 TBCCQ15814 346 aa14.62□□□□□ -0.07
VPS33A-206ENST00000542310 C18orf21Q32NC0 220 aaPredicted RBP14.62□□□□□ -0.07
VPS33A-206ENST00000542310 PAGE2BQ5JRK9 111 aa14.62□□□□□ -0.07
VPS33A-206ENST00000542310 GRTP1Q5TC63 336 aa14.62□□□□□ -0.07
VPS33A-206ENST00000542310 SPINK14Q6IE38 97 aa14.62□□□□□ -0.07
VPS33A-206ENST00000542310 SLC25A25Q6KCM7 469 aa14.62□□□□□ -0.07
VPS33A-206ENST00000542310 Q6ZPB1 254 aaPredicted RBP14.62□□□□□ -0.07
VPS33A-206ENST00000542310 C3orf62Q6ZUJ4 267 aa14.62□□□□□ -0.07
VPS33A-206ENST00000542310 GALNTL5Q7Z4T8 443 aa14.62□□□□□ -0.07
VPS33A-206ENST00000542310 ZNF595Q8IYB9 648 aa14.62□□□□□ -0.07
VPS33A-206ENST00000542310 CYP4X1Q8N118 509 aa14.62□□□□□ -0.07
VPS33A-206ENST00000542310 ZNF808Q8N4W9 903 aaPredicted RBP14.62□□□□□ -0.07
VPS33A-206ENST00000542310 APCDD1LQ8NCL9 501 aa14.62□□□□□ -0.07
VPS33A-206ENST00000542310 B3GNT7Q8NFL0 401 aa14.62□□□□□ -0.07
VPS33A-206ENST00000542310 ITLN2Q8WWU7 325 aaPredicted RBP14.62□□□□□ -0.07
VPS33A-206ENST00000542310 CCT6BQ92526 530 aa14.62□□□□□ -0.07
VPS33A-206ENST00000542310 CCDC120Q96HB5 630 aa14.62□□□□□ -0.07
VPS33A-206ENST00000542310 MAGED4Q96JG8 741 aa14.62□□□□□ -0.07
VPS33A-206ENST00000542310 QRFPRQ96P65 431 aa14.62□□□□□ -0.07
VPS33A-206ENST00000542310 SERINC2Q96SA4 455 aa14.62□□□□□ -0.07
VPS33A-206ENST00000542310 HES7Q9BYE0 225 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms