RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 SLC15A4Q8N697 577 aa16.35■□□□□ 0.21
PCDHB17P-201ENST00000539533 JPH3Q8WXH2 748 aaPredicted RBP16.35■□□□□ 0.21
PCDHB17P-201ENST00000539533 ZBTB18Q99592 522 aa16.35■□□□□ 0.21
PCDHB17P-201ENST00000539533 CLMPQ9H6B4 373 aa16.35■□□□□ 0.21
PCDHB17P-201ENST00000539533 MVB12BQ9H7P6 319 aa16.35■□□□□ 0.21
PCDHB17P-201ENST00000539533 MAGEL2Q9UJ55 1249 aa16.35■□□□□ 0.21
PCDHB17P-201ENST00000539533 STK25O00506 426 aa16.35■□□□□ 0.21
PCDHB17P-201ENST00000539533 LRATO95237 230 aa16.35■□□□□ 0.21
PCDHB17P-201ENST00000539533 TGFB1P01137 390 aa16.35■□□□□ 0.21
PCDHB17P-201ENST00000539533 NPPAP01160 153 aa16.35■□□□□ 0.21
PCDHB17P-201ENST00000539533 THRBP10828 461 aa16.35■□□□□ 0.21
PCDHB17P-201ENST00000539533 PRPS2P11908 318 aa16.35■□□□□ 0.21
PCDHB17P-201ENST00000539533 HSD3B1P14060 373 aa16.35■□□□□ 0.21
PCDHB17P-201ENST00000539533 HSD3B2P26439 372 aa16.35■□□□□ 0.21
PCDHB17P-201ENST00000539533 RABIFP47224 123 aa16.35■□□□□ 0.21
PCDHB17P-201ENST00000539533 EIF2B2P49770 351 aaKnown RBP16.35■□□□□ 0.21
PCDHB17P-201ENST00000539533 CLDN8P56748 225 aa16.35■□□□□ 0.21
PCDHB17P-201ENST00000539533 TUBA3CQ13748 450 aa16.35■□□□□ 0.21
PCDHB17P-201ENST00000539533 BPIFB6Q8NFQ5 453 aa16.35■□□□□ 0.21
PCDHB17P-201ENST00000539533 RAB2BQ8WUD1 216 aa16.35■□□□□ 0.21
PCDHB17P-201ENST00000539533 TRUB1Q8WWH5 349 aaKnown RBP16.35■□□□□ 0.21
PCDHB17P-201ENST00000539533 REPS1Q96D71 796 aa16.35■□□□□ 0.21
PCDHB17P-201ENST00000539533 C11orf24Q96F05 449 aaPredicted RBP16.35■□□□□ 0.21
PCDHB17P-201ENST00000539533 NRBF2Q96F24 287 aa16.35■□□□□ 0.21
PCDHB17P-201ENST00000539533 TCEAL2Q9H3H9 227 aaPredicted RBP16.35■□□□□ 0.21
PCDHB17P-201ENST00000539533 ICKQ9UPZ9 632 aa16.35■□□□□ 0.21
PCDHB17P-201ENST00000539533 FAM32AQ9Y421 112 aaKnown RBP16.35■□□□□ 0.21
PCDHB17P-201ENST00000539533 PCDHB3Q9Y5E6 796 aa16.35■□□□□ 0.21
PCDHB17P-201ENST00000539533 CORINQ9Y5Q5 1042 aa16.35■□□□□ 0.21
PCDHB17P-201ENST00000539533 H7BY64 318 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 ABCB7O75027 752 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 ZNF217O75362 1048 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 DEAF1O75398 565 aaPredicted RBP16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 SULT1C4O75897 302 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 ALPLP05186 524 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 MAPK1P28482 360 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 ACSM2AQ08AH3 577 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 ACSM2BQ68CK6 577 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 TMIGD1Q6UXZ0 262 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 NRROSQ86YC3 692 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 FAM20CQ8IXL6 584 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 RAB42Q8N4Z0 105 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 C1orf52Q8N6N3 182 aaKnown RBP16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 GLB1L3Q8NCI6 653 aaPredicted RBP16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 GPR156Q8NFN8 814 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 TMBIM1Q969X1 311 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 FCRL1Q96LA6 429 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 PRAP1Q96NZ9 151 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 ORAI3Q9BRQ5 295 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 LHPPQ9H008 270 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 ZNF624Q9P2J8 865 aaPredicted RBP16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 KLF15Q9UIH9 416 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 PSME2Q9UL46 239 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 A0A1W2PPC4 97 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 PRSS23O95084 383 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 PGRP06401 933 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 GSTT2P0CG29 244 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 GSTT2BP0CG30 244 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 PKLRP30613 574 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 PHC1P78364 1004 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 LAPTM5Q13571 262 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 RGS21Q2M5E4 152 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 GPR153Q6NV75 609 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 GALNT18Q6P9A2 607 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 THAP5Q7Z6K1 395 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 PHACTR4Q8IZ21 702 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 CLEC4FQ8N1N0 589 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 DTWD1Q8N5C7 304 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 KNL1Q8NG31 2342 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 NELL2Q99435 816 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 OR51B5Q9H339 312 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 GPN2Q9H9Y4 310 aaPredicted RBP16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 TBC1D17Q9HA65 648 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 DMRT3Q9NQL9 472 aa16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 MAGED1Q9Y5V3 778 aaPredicted RBP16.34■□□□□ 0.21
PCDHB17P-201ENST00000539533 SAP18O00422 153 aaKnown RBP16.33■□□□□ 0.2
PCDHB17P-201ENST00000539533 CLPXO76031 633 aa16.33■□□□□ 0.2
PCDHB17P-201ENST00000539533 THEGLP0DJG4 465 aa16.33■□□□□ 0.2
PCDHB17P-201ENST00000539533 CRHBPP24387 322 aa16.33■□□□□ 0.2
PCDHB17P-201ENST00000539533 RAE1P78406 368 aaKnown RBP16.33■□□□□ 0.2
PCDHB17P-201ENST00000539533 KCNC4Q03721 635 aa16.33■□□□□ 0.2
PCDHB17P-201ENST00000539533 PRPF38BQ5VTL8 546 aaKnown RBP16.33■□□□□ 0.2
PCDHB17P-201ENST00000539533 DLEU7Q6UYE1 221 aa16.33■□□□□ 0.2
PCDHB17P-201ENST00000539533 VN1R5Q7Z5H4 357 aa16.33■□□□□ 0.2
PCDHB17P-201ENST00000539533 STK32CQ86UX6 486 aa16.33■□□□□ 0.2
PCDHB17P-201ENST00000539533 DPP10Q8N608 796 aa16.33■□□□□ 0.2
PCDHB17P-201ENST00000539533 OR2A1Q8NGT9 310 aa16.33■□□□□ 0.2
PCDHB17P-201ENST00000539533 OR2L8Q8NGY9 312 aa16.33■□□□□ 0.2
PCDHB17P-201ENST00000539533 CHTF18Q8WVB6 975 aa16.33■□□□□ 0.2
PCDHB17P-201ENST00000539533 SLC13A3Q8WWT9 602 aa16.33■□□□□ 0.2
PCDHB17P-201ENST00000539533 PCBD2Q9H0N5 130 aa16.33■□□□□ 0.2
PCDHB17P-201ENST00000539533 ADNPQ9H2P0 1102 aa16.33■□□□□ 0.2
PCDHB17P-201ENST00000539533 PPT2Q9UMR5 302 aa16.33■□□□□ 0.2
PCDHB17P-201ENST00000539533 RUVBL1Q9Y265 456 aaKnown RBP16.33■□□□□ 0.2
PCDHB17P-201ENST00000539533 FEZF1A0PJY2 475 aa16.33■□□□□ 0.2
PCDHB17P-201ENST00000539533 FOXE1O00358 373 aaPredicted RBP16.33■□□□□ 0.2
PCDHB17P-201ENST00000539533 IL6P05231 212 aa16.33■□□□□ 0.2
PCDHB17P-201ENST00000539533 RAP2AP10114 183 aa16.33■□□□□ 0.2
PCDHB17P-201ENST00000539533 CD300CQ08708 224 aa16.33■□□□□ 0.2
PCDHB17P-201ENST00000539533 SELPLGQ14242 412 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms