RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 AMZ1Q400G9 498 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 VPS26BQ4G0F5 336 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 PDSS1Q5T2R2 415 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 LRIF1Q5T3J3 769 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 LIPMQ5VYY2 423 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 C9orf57Q5W0N0 161 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 GPR139Q6DWJ6 353 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 GTF2H5Q6ZYL4 71 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 ADAMTSL2Q86TH1 951 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 ATCAYQ86WG3 371 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 PYROXD2Q8N2H3 581 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 DNASE1L2Q92874 299 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 SOX17Q9H6I2 414 aaPredicted RBP6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 TNFRSF10DQ9UBN6 386 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 MEMO1Q9Y316 297 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 SMLR1H3BR10 107 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 B4GAT1O43505 415 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 SLC22A5O76082 557 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 DCNP07585 359 aaKnown RBP6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 UCHL1P09936 223 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 GNSP15586 552 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 UGT2B7P16662 529 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 DHPSP49366 369 aaPredicted RBP6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 RAB10P61026 200 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 ACTA2P62736 377 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 ACTG2P63267 376 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 ACTC1P68032 377 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 ACTA1P68133 377 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 CREB5Q02930 508 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 CARD16Q5EG05 197 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 CAPN13Q6MZZ7 669 aaPredicted RBP6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 LINGO4Q6UY18 593 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 CMIPQ8IY22 773 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 OR5T1Q8NG75 326 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 OR2AP1Q8NGE2 309 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 TXNDC15Q96J42 360 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 SECISBP2Q96T21 854 aaKnown RBP6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 GPR20Q99678 358 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 DUSP16Q9BY84 665 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 POLMQ9NP87 494 aaPredicted RBP6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 XPNPEP1Q9NQW7 623 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 SPIN1Q9Y657 262 aaPredicted RBP6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 PTCH2Q9Y6C5 1203 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 A0A1B0GV50 99 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 SMIM35A0A1B0GVV1 85 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 SLC31A1O15431 190 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 PROM1O43490 865 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 BEST1O76090 585 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 GSRP00390 522 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 DBIP07108 87 aaKnown RBP6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 HLA-EP13747 358 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 SMIM11AP58511 58 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 VAMP3Q15836 100 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 PTCHD3Q3KNS1 767 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 MON1AQ86VX9 555 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 HID1Q8IV36 788 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 TOP6BLQ8N6T0 577 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 FBXO15Q8NCQ5 510 aaPredicted RBP6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 CLRN3Q8NCR9 226 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 OR1M1Q8NGA1 313 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 OR52H1Q8NGJ2 320 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 RPLP0P6Q8NHW5 317 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 SNIP1Q8TAD8 396 aaKnown RBP6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 ZCCHC10Q8TBK6 192 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 ZNF596Q8TC21 504 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 RSC1A1Q92681 617 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 KLK6Q92876 244 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 RNF157Q96PX1 679 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 MROQ9BYG7 248 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 PRDM12Q9H4Q4 367 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 TAS2R14Q9NYV8 317 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 A0A087WZY1 265 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 GLYATL1P3A0A0U1RQE8 302 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 XKRYO14609 159 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 AGR2O95994 175 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 CPN2P22792 545 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 GRM5P41594 1212 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 VEGFCP49767 419 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 BIDP55957 195 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 MC1RQ01726 317 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 TUSC3Q13454 348 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 SEMA5AQ13591 1074 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 BCL7AQ4VC05 210 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 ARHGAP40Q5TG30 622 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 FOXB2Q5VYV0 432 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 ALKAL2Q6UX46 152 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 QSOX2Q6ZRP7 698 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 C1orf186Q6ZWK4 172 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 LRRC70Q7Z2Q7 622 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 ARHGAP12Q8IWW6 846 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 CELF2-AS1Q8N7Q2 184 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 ZNF454Q8N9F8 522 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 ADAMTS15Q8TE58 950 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 KCNN1Q92952 543 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 FEM1CQ96JP0 617 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 MGME1Q9BQP7 344 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 C11orf16Q9NQ32 467 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 TRIM36Q9NQ86 728 aa6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.74□□□□□ -1.33
TGFBR3-210ENST00000533089 SEMA3GQ9NS98 782 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms