RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	FCGR1B	Q92637	280 aa		7.53	□□□□□ -1.2
SPIDR-223	ENST00000524033	TCEAL3	Q969E4	200 aa		7.53	□□□□□ -1.2
SPIDR-223	ENST00000524033	SLC38A4	Q969I6	547 aa		7.53	□□□□□ -1.2
SPIDR-223	ENST00000524033	WBP2	Q969T9	261 aa		7.53	□□□□□ -1.2
SPIDR-223	ENST00000524033	TESC	Q96BS2	214 aa		7.53	□□□□□ -1.2
SPIDR-223	ENST00000524033	PYCR2	Q96C36	320 aa		7.53	□□□□□ -1.2
SPIDR-223	ENST00000524033	TXNDC15	Q96J42	360 aa		7.53	□□□□□ -1.2
SPIDR-223	ENST00000524033	GABARAPL3	Q9BY60	117 aa		7.53	□□□□□ -1.2
SPIDR-223	ENST00000524033	DPY30	Q9C005	99 aa		7.53	□□□□□ -1.2
SPIDR-223	ENST00000524033	DSN1	Q9H410	356 aa		7.53	□□□□□ -1.2
SPIDR-223	ENST00000524033	IPPK	Q9H8X2	491 aa		7.53	□□□□□ -1.2
SPIDR-223	ENST00000524033	LRTM1	Q9HBL6	345 aa		7.53	□□□□□ -1.2
SPIDR-223	ENST00000524033	CPNE5	Q9HCH3	593 aa		7.53	□□□□□ -1.2
SPIDR-223	ENST00000524033	ZDHHC4	Q9NPG8	344 aa		7.53	□□□□□ -1.2
SPIDR-223	ENST00000524033	LATS2	Q9NRM7	1088 aa		7.53	□□□□□ -1.2
SPIDR-223	ENST00000524033	IL17C	Q9P0M4	197 aa		7.53	□□□□□ -1.2
SPIDR-223	ENST00000524033	HCN2	Q9UL51	889 aa		7.53	□□□□□ -1.2
SPIDR-223	ENST00000524033	PPT2	Q9UMR5	302 aa		7.53	□□□□□ -1.2
SPIDR-223	ENST00000524033	ERVK-11	Q9UQG0	969 aa		7.53	□□□□□ -1.2
SPIDR-223	ENST00000524033	UGT2A1	Q9Y4X1	527 aa		7.53	□□□□□ -1.2
SPIDR-223	ENST00000524033	PCDHGA3	Q9Y5H0	932 aa		7.53	□□□□□ -1.2
SPIDR-223	ENST00000524033	KIF26A	Q9ULI4	1882 aa	Predicted RBP	7.53	□□□□□ -1.2
SPIDR-223	ENST00000524033	COL4A2	P08572	1712 aa		7.52	□□□□□ -1.2
SPIDR-223	ENST00000524033	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	ILVBL	A1L0T0	632 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	NEDD8-MDP1	E9PL57	170 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033		J3QW42	95 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	TAF4	O00268	1085 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	TOR1B	O14657	336 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	STX7	O15400	261 aa	Known RBP	7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	RGS10	O43665	173 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	WBP4	O75554	376 aa	Known RBP	7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	FTH1	P02794	183 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	S100B	P04271	92 aa	Predicted RBP	7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	BCKDHA	P12694	445 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	TYR	P14679	529 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	EPOR	P19235	508 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	ALDH4A1	P30038	563 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	CA5A	P35218	305 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	ETV6	P41212	452 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	P2RY2	P41231	377 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	GNPDA1	P46926	289 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	DHPS	P49366	369 aa	Predicted RBP	7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	TMED10	P49755	219 aa	Known RBP	7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	ITGA1	P56199	1179 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	C21orf58	P58505	322 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	NCS1	P62166	190 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	RPS14	P62263	151 aa	Known RBP	7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	IL5RA	Q01344	420 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	TBCE	Q15813	527 aa	Predicted RBP	7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	KCNJ8	Q15842	424 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	ZRANB3	Q5FWF4	1079 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	CACHD1	Q5VU97	1274 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	PMS2CL	Q68D20	193 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	OR2T5	Q6IEZ7	315 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	SDE2	Q6IQ49	451 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	CERS6	Q6ZMG9	384 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	TPGS1	Q6ZTW0	290 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	ADCK1	Q86TW2	530 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	MIB1	Q86YT6	1006 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	ARMC8	Q8IUR7	673 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	GALNT12	Q8IXK2	581 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	TMEFF1	Q8IYR6	380 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	KRTCAP2	Q8N6L1	136 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	OR2T29	Q8NH02	315 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	EID2B	Q96D98	161 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	FAM120B	Q96EK7	910 aa	Known RBP	7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	FRMD6	Q96NE9	622 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	HBEGF	Q99075	208 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	RHNO1	Q9BSD3	238 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	INPP5K	Q9BT40	448 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	BBS2	Q9BXC9	721 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	ACPT	Q9BZG2	426 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	CD244	Q9BZW8	370 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	IL1RAP	Q9NPH3	570 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	FARSB	Q9NSD9	589 aa	Known RBP	7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	PLCXD1	Q9NUJ7	323 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	SIRT5	Q9NXA8	310 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	CCDC59	Q9P031	241 aa	Known RBP	7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	LSM7	Q9UK45	103 aa	Known RBP	7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	AGO1	Q9UL18	857 aa	Known RBP	7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	ABCG2	Q9UNQ0	655 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	SAMD4A	Q9UPU9	718 aa	Known RBP	7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	DLGAP4	Q9Y2H0	992 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	ORC6	Q9Y5N6	252 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	RAI2	Q9Y5P3	530 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	AP1M2	Q9Y6Q5	423 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	SPEG	Q15772	3267 aa		7.52	□□□□□ -1.21
SPIDR-223	ENST00000524033	PLXNA2	O75051	1894 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	CEP295	Q9C0D2	2601 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	FREM2	Q5SZK8	3169 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	LAMA5	O15230	3695 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	DENND4C	Q5VZ89	1909 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	TICRR	Q7Z2Z1	1910 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	TCRBV21S2A2	A0A5A6	115 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	SAGE2P	A6NJ88	616 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	C4orf47	A7E2U8	309 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	IQCF5	A8MTL0	148 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033	ANKRD66	B4E2M5	251 aa		7.51	□□□□□ -1.21
SPIDR-223	ENST00000524033		E5RI56	91 aa		7.51	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms