RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 BMPERQ8N8U9 685 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 OR13C3Q8NGS6 347 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 HCAR2Q8TDS4 363 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 MRPS27Q92552 414 aaKnown RBP2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 EXT2Q93063 718 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 OTUB1Q96FW1 271 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 RBM41Q96IZ5 413 aaKnown RBP2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 RADILQ96JH8 1075 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 RMDN2Q96LZ7 410 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 TCEANC2Q96MN5 208 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 ZNF558Q96NG5 402 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 USP28Q96RU2 1077 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 CCT8L2Q96SF2 557 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 CRACR2AQ9BSW2 395 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 PRRG4Q9BZD6 226 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 PUS3Q9BZE2 481 aaKnown RBP2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 ANKRD2Q9GZV1 360 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 ZMYND12Q9H0C1 365 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 FAM49AQ9H0Q0 323 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 Q9H8V8 135 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 CHST11Q9NPF2 352 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 PPANQ9NQ55 473 aaKnown RBP2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 ZNF71Q9NQZ8 489 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 FAM207AQ9NSI2 230 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 P4HTMQ9NXG6 502 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 TXNDC16Q9P2K2 825 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 RNF150Q9ULK6 438 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 STUB1Q9UNE7 303 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 TMED3Q9Y3Q3 217 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 SPEF2Q9C093 1822 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 MEGF6O75095 1541 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 TNS3Q68CZ2 1445 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 UBN2Q6ZU65 1347 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 SCN11AQ9UI33 1791 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 MYH6P13533 1939 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 TRAV24A0A0B4J272 114 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 A0A1B0GVG6 124 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 ZNF233A6NK53 670 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 GOLGA8KD6RF30 607 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 NR5A2O00482 541 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 EPHB6O15197 1021 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 TRAPPC3O43617 180 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 KIF5CO60282 957 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 DIAPH2O60879 1101 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 GLRA3O75311 464 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 CDC123O75794 336 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 CDK2AP2O75956 126 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 ATP6V1G2O95670 118 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 GPIP06744 558 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 GSTA1P08263 222 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 VIMP08670 466 aaKnown RBP2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 EZRP15311 586 aaKnown RBP2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 IFNAR1P17181 557 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 SP100P23497 879 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 PTAFRP25105 342 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 CDC25CP30307 473 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 GCKP35557 465 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 HSD17B3P37058 310 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 RPL21P46778 160 aaKnown RBP2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 VAMP7P51809 220 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 NDUFA8P51970 172 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 ATP12AP54707 1039 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 GNGT1P63211 74 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 MYL5Q02045 173 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 ITGB3BPQ13352 177 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 BTG3Q14201 252 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 MRGPRG-AS1Q2M3A8 158 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 XKR6Q5GH73 641 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 TCTE1Q5JU00 501 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 FFAR4Q5NUL3 377 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 ARMC3Q5W041 872 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 RESP18Q5W5W9 173 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 NOTCH2NLQ7Z3S9 236 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 SLFN11Q7Z7L1 901 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 KIAA1328Q86T90 577 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 NLRP14Q86W24 1093 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 MMD2Q8IY49 270 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 RASGEF1AQ8N9B8 481 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 ADAD2Q8NCV1 583 aaKnown RBP2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 ZNF248Q8NDW4 579 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 OR4K1Q8NGD4 311 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 OR2T11Q8NH01 316 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 OR4C3Q8NH37 302 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 CCDC12Q8WUD4 166 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 PIGBQ92521 554 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 GMPPAQ96IJ6 420 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 C8orf76Q96K31 380 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 RPGRIP1Q96KN7 1286 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 SPAG5Q96R06 1193 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 FN3KQ9H479 309 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 TLE6Q9H808 572 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 SCRT2Q9NQ03 307 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 TRPV5Q9NQA5 729 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 GSN-AS1Q9NRJ2 163 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 OR6C2Q9NZP2 312 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 C19orf25Q9UFG5 118 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 ERRFI1Q9UJM3 462 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 WDR83OSQ9Y284 106 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 KCNK7Q9Y2U2 307 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 LIPGQ9Y5X9 500 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms