RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 CCT6BQ92526 530 aa15.18■□□□□ 0.02
PDLIM5-216ENST00000511767 TSLPQ969D9 159 aa15.18■□□□□ 0.02
PDLIM5-216ENST00000511767 UBE2E3Q969T4 207 aa15.18■□□□□ 0.02
PDLIM5-216ENST00000511767 FAR2Q96K12 515 aa15.18■□□□□ 0.02
PDLIM5-216ENST00000511767 PTCHD1Q96NR3 888 aa15.18■□□□□ 0.02
PDLIM5-216ENST00000511767 MRPL57Q9BQC6 102 aaKnown RBP15.18■□□□□ 0.02
PDLIM5-216ENST00000511767 REXO4Q9GZR2 422 aaKnown RBP15.18■□□□□ 0.02
PDLIM5-216ENST00000511767 SLAMF7Q9NQ25 335 aa15.18■□□□□ 0.02
PDLIM5-216ENST00000511767 CPSF2Q9P2I0 782 aaKnown RBP15.18■□□□□ 0.02
PDLIM5-216ENST00000511767 C19orf25Q9UFG5 118 aaPredicted RBP15.18■□□□□ 0.02
PDLIM5-216ENST00000511767 FETUBQ9UGM5 382 aa15.18■□□□□ 0.02
PDLIM5-216ENST00000511767 B3GNT3Q9Y2A9 372 aa15.18■□□□□ 0.02
PDLIM5-216ENST00000511767 E2F3O00716 465 aa15.17■□□□□ 0.02
PDLIM5-216ENST00000511767 PRMT3O60678 531 aa15.17■□□□□ 0.02
PDLIM5-216ENST00000511767 SEC24DO94855 1032 aaPredicted RBP15.17■□□□□ 0.02
PDLIM5-216ENST00000511767 ITGAMP11215 1152 aa15.17■□□□□ 0.02
PDLIM5-216ENST00000511767 SOX11P35716 441 aa15.17■□□□□ 0.02
PDLIM5-216ENST00000511767 ACTN3Q08043 901 aaPredicted RBP15.17■□□□□ 0.02
PDLIM5-216ENST00000511767 MFAP5Q13361 173 aa15.17■□□□□ 0.02
PDLIM5-216ENST00000511767 GTF2H2Q13888 395 aa15.17■□□□□ 0.02
PDLIM5-216ENST00000511767 ABRAXAS2Q15018 415 aa15.17■□□□□ 0.02
PDLIM5-216ENST00000511767 INPP5JQ15735 1006 aaPredicted RBP15.17■□□□□ 0.02
PDLIM5-216ENST00000511767 TSNAXIP1Q2TAA8 658 aa15.17■□□□□ 0.02
PDLIM5-216ENST00000511767 LIPJQ5W064 366 aa15.17■□□□□ 0.02
PDLIM5-216ENST00000511767 PLAG1Q6DJT9 500 aa15.17■□□□□ 0.02
PDLIM5-216ENST00000511767 H3F3CQ6NXT2 135 aa15.17■□□□□ 0.02
PDLIM5-216ENST00000511767 GTF2H2CQ6P1K8 395 aa15.17■□□□□ 0.02
PDLIM5-216ENST00000511767 LINC00696Q6ZRV3 163 aa15.17■□□□□ 0.02
PDLIM5-216ENST00000511767 GSPT2Q8IYD1 628 aaKnown RBP15.17■□□□□ 0.02
PDLIM5-216ENST00000511767 CATSPER1Q8NEC5 780 aa15.17■□□□□ 0.02
PDLIM5-216ENST00000511767 DNAJB14Q8TBM8 379 aa15.17■□□□□ 0.02
PDLIM5-216ENST00000511767 TM9SF4Q92544 642 aa15.17■□□□□ 0.02
PDLIM5-216ENST00000511767 HAS2Q92819 552 aa15.17■□□□□ 0.02
PDLIM5-216ENST00000511767 MTBPQ96DY7 904 aa15.17■□□□□ 0.02
PDLIM5-216ENST00000511767 SCYL1Q96KG9 808 aa15.17■□□□□ 0.02
PDLIM5-216ENST00000511767 MS4A8Q9BY19 250 aa15.17■□□□□ 0.02
PDLIM5-216ENST00000511767 RBCK1Q9BYM8 510 aa15.17■□□□□ 0.02
PDLIM5-216ENST00000511767 IPPKQ9H8X2 491 aa15.17■□□□□ 0.02
PDLIM5-216ENST00000511767 KCMF1Q9P0J7 381 aa15.17■□□□□ 0.02
PDLIM5-216ENST00000511767 LUZP4Q9P127 313 aa15.17■□□□□ 0.02
PDLIM5-216ENST00000511767 TSC22D4Q9Y3Q8 395 aa15.17■□□□□ 0.02
PDLIM5-216ENST00000511767 ANGPTL3Q9Y5C1 460 aa15.17■□□□□ 0.02
PDLIM5-216ENST00000511767 CSAG2Q9Y5P2 127 aa15.17■□□□□ 0.02
PDLIM5-216ENST00000511767 STX16-NPEPL1H3BU86 382 aa15.16■□□□□ 0.02
PDLIM5-216ENST00000511767 STX16O14662 325 aa15.16■□□□□ 0.02
PDLIM5-216ENST00000511767 TGFB1P01137 390 aa15.16■□□□□ 0.02
PDLIM5-216ENST00000511767 JAK1P23458 1154 aa15.16■□□□□ 0.02
PDLIM5-216ENST00000511767 HPDP32754 393 aaPredicted RBP15.16■□□□□ 0.02
PDLIM5-216ENST00000511767 SFT2D3Q587I9 215 aa15.16■□□□□ 0.02
PDLIM5-216ENST00000511767 TEX35Q5T0J7 233 aa15.16■□□□□ 0.02
PDLIM5-216ENST00000511767 DEPDC1Q5TB30 811 aa15.16■□□□□ 0.02
PDLIM5-216ENST00000511767 GRHL2Q6ISB3 625 aa15.16■□□□□ 0.02
PDLIM5-216ENST00000511767 QSOX2Q6ZRP7 698 aa15.16■□□□□ 0.02
PDLIM5-216ENST00000511767 CUZD1Q86UP6 607 aa15.16■□□□□ 0.02
PDLIM5-216ENST00000511767 PTGR2Q8N8N7 351 aaPredicted RBP15.16■□□□□ 0.02
PDLIM5-216ENST00000511767 L3MBTL4Q8NA19 623 aa15.16■□□□□ 0.02
PDLIM5-216ENST00000511767 M1APQ8TC57 530 aa15.16■□□□□ 0.02
PDLIM5-216ENST00000511767 CPT1CQ8TCG5 803 aa15.16■□□□□ 0.02
PDLIM5-216ENST00000511767 MZB1Q8WU39 189 aa15.16■□□□□ 0.02
PDLIM5-216ENST00000511767 PHF21BQ96EK2 531 aa15.16■□□□□ 0.02
PDLIM5-216ENST00000511767 SERINC2Q96SA4 455 aa15.16■□□□□ 0.02
PDLIM5-216ENST00000511767 NECTIN3Q9NQS3 549 aa15.16■□□□□ 0.02
PDLIM5-216ENST00000511767 PRDM9Q9NQV7 894 aa15.16■□□□□ 0.02
PDLIM5-216ENST00000511767 PSD3Q9NYI0 1048 aa15.16■□□□□ 0.02
PDLIM5-216ENST00000511767 PLA2G3Q9NZ20 509 aa15.16■□□□□ 0.02
PDLIM5-216ENST00000511767 STMN3Q9NZ72 180 aa15.16■□□□□ 0.02
PDLIM5-216ENST00000511767 PTGFRNQ9P2B2 879 aa15.16■□□□□ 0.02
PDLIM5-216ENST00000511767 XPR1Q9UBH6 696 aa15.16■□□□□ 0.02
PDLIM5-216ENST00000511767 ADGRE2Q9UHX3 823 aa15.16■□□□□ 0.02
PDLIM5-216ENST00000511767 TMCO1Q9UM00 188 aa15.16■□□□□ 0.02
PDLIM5-216ENST00000511767 RNF11Q9Y3C5 154 aa15.16■□□□□ 0.02
PDLIM5-216ENST00000511767 CLDN16Q9Y5I7 305 aa15.16■□□□□ 0.02
PDLIM5-216ENST00000511767 NUP210LQ5VU65 1888 aa15.16■□□□□ 0.02
PDLIM5-216ENST00000511767 FLNCQ14315 2725 aa15.16■□□□□ 0.02
PDLIM5-216ENST00000511767 IGKV3D-11A0A0A0MRZ8 115 aa15.15■□□□□ 0.02
PDLIM5-216ENST00000511767 H0YIV9 168 aa15.15■□□□□ 0.02
PDLIM5-216ENST00000511767 CYR61O00622 381 aa15.15■□□□□ 0.02
PDLIM5-216ENST00000511767 OR7A17O14581 309 aa15.15■□□□□ 0.02
PDLIM5-216ENST00000511767 B3GALT2O43825 422 aa15.15■□□□□ 0.02
PDLIM5-216ENST00000511767 ZNF500O60304 480 aaPredicted RBP15.15■□□□□ 0.02
PDLIM5-216ENST00000511767 UGDHO60701 494 aa15.15■□□□□ 0.02
PDLIM5-216ENST00000511767 ZIC2O95409 532 aaPredicted RBP15.15■□□□□ 0.02
PDLIM5-216ENST00000511767 TNFRSF8P28908 595 aa15.15■□□□□ 0.02
PDLIM5-216ENST00000511767 PIK3CBP42338 1070 aa15.15■□□□□ 0.02
PDLIM5-216ENST00000511767 MTTPP55157 894 aa15.15■□□□□ 0.02
PDLIM5-216ENST00000511767 OR4D2P58180 307 aa15.15■□□□□ 0.02
PDLIM5-216ENST00000511767 AP2B1P63010 937 aa15.15■□□□□ 0.02
PDLIM5-216ENST00000511767 TMEM35AQ53FP2 167 aa15.15■□□□□ 0.02
PDLIM5-216ENST00000511767 B3GNTL1Q67FW5 361 aaPredicted RBP15.15■□□□□ 0.02
PDLIM5-216ENST00000511767 TRIM40Q6P9F5 258 aa15.15■□□□□ 0.02
PDLIM5-216ENST00000511767 SH2D5Q6ZV89 423 aa15.15■□□□□ 0.02
PDLIM5-216ENST00000511767 CHSY3Q70JA7 882 aa15.15■□□□□ 0.02
PDLIM5-216ENST00000511767 GOLGA7Q7Z5G4 137 aa15.15■□□□□ 0.02
PDLIM5-216ENST00000511767 RNF175Q8N4F7 328 aa15.15■□□□□ 0.02
PDLIM5-216ENST00000511767 CISD2Q8N5K1 135 aaKnown RBP15.15■□□□□ 0.02
PDLIM5-216ENST00000511767 SIRT6Q8N6T7 355 aa15.15■□□□□ 0.02
PDLIM5-216ENST00000511767 SRFBP1Q8NEF9 429 aaKnown RBP15.15■□□□□ 0.02
PDLIM5-216ENST00000511767 HUS1BQ8NHY5 278 aa15.15■□□□□ 0.02
PDLIM5-216ENST00000511767 PPP4R1Q8TF05 950 aa15.15■□□□□ 0.02
PDLIM5-216ENST00000511767 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.15■□□□□ 0.025e-8■■■■■ 65.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms