RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 MYBPC3Q14896 1274 aa12.77□□□□□ -0.37
SNF8-206ENST00000509989 IGFBP7Q16270 282 aa12.77□□□□□ -0.37
SNF8-206ENST00000509989 CPSF6Q16630 551 aaKnown RBP eCLIP12.77□□□□□ -0.37
SNF8-206ENST00000509989 UNC50Q53HI1 259 aa12.77□□□□□ -0.37
SNF8-206ENST00000509989 B3GNTL1Q67FW5 361 aaPredicted RBP12.77□□□□□ -0.37
SNF8-206ENST00000509989 GRHL2Q6ISB3 625 aa12.77□□□□□ -0.37
SNF8-206ENST00000509989 MED27Q6P2C8 311 aa12.77□□□□□ -0.37
SNF8-206ENST00000509989 ABHD17CQ6PCB6 329 aa12.77□□□□□ -0.37
SNF8-206ENST00000509989 ABHD13Q7L211 337 aa12.77□□□□□ -0.37
SNF8-206ENST00000509989 MYLK4Q86YV6 388 aaPredicted RBP12.77□□□□□ -0.37
SNF8-206ENST00000509989 TBC1D19Q8N5T2 526 aa12.77□□□□□ -0.37
SNF8-206ENST00000509989 Q8NA96 180 aa12.77□□□□□ -0.37
SNF8-206ENST00000509989 CLEC1AQ8NC01 280 aa12.77□□□□□ -0.37
SNF8-206ENST00000509989 OR2L5Q8NG80 312 aa12.77□□□□□ -0.37
SNF8-206ENST00000509989 HUS1BQ8NHY5 278 aa12.77□□□□□ -0.37
SNF8-206ENST00000509989 UCN3Q969E3 161 aa12.77□□□□□ -0.37
SNF8-206ENST00000509989 GAL3ST3Q96A11 431 aa12.77□□□□□ -0.37
SNF8-206ENST00000509989 IMMP1LQ96LU5 166 aa12.77□□□□□ -0.37
SNF8-206ENST00000509989 FER1L6-AS2Q96M78 137 aa12.77□□□□□ -0.37
SNF8-206ENST00000509989 IP6K3Q96PC2 410 aa12.77□□□□□ -0.37
SNF8-206ENST00000509989 MTERF1Q99551 399 aaKnown RBP12.77□□□□□ -0.37
SNF8-206ENST00000509989 SMAD5Q99717 465 aaKnown RBP12.77□□□□□ -0.37
SNF8-206ENST00000509989 MRPL57Q9BQC6 102 aaKnown RBP12.77□□□□□ -0.37
SNF8-206ENST00000509989 CAPS2Q9BXY5 557 aa12.77□□□□□ -0.37
SNF8-206ENST00000509989 PARD6BQ9BYG5 372 aa12.77□□□□□ -0.37
SNF8-206ENST00000509989 MRPL46Q9H2W6 279 aaKnown RBP12.77□□□□□ -0.37
SNF8-206ENST00000509989 ANGPTL3Q9Y5C1 460 aa12.77□□□□□ -0.37
SNF8-206ENST00000509989 IQANK1A0A1B0GTG1 560 aa12.76□□□□□ -0.37
SNF8-206ENST00000509989 A0A1W2PQ72 361 aa12.76□□□□□ -0.37
SNF8-206ENST00000509989 WASHC1A8K0Z3 465 aa12.76□□□□□ -0.37
SNF8-206ENST00000509989 A8MUA0 341 aa12.76□□□□□ -0.37
SNF8-206ENST00000509989 MAGEB17A8MXT2 336 aa12.76□□□□□ -0.37
SNF8-206ENST00000509989 MAN1A2O60476 641 aa12.76□□□□□ -0.37
SNF8-206ENST00000509989 PRKRAO75569 313 aaKnown RBP12.76□□□□□ -0.37
SNF8-206ENST00000509989 F10P00742 488 aa12.76□□□□□ -0.37
SNF8-206ENST00000509989 C8orf89P0DMQ9 161 aa12.76□□□□□ -0.37
SNF8-206ENST00000509989 RPS13P62277 151 aaKnown RBP12.76□□□□□ -0.37
SNF8-206ENST00000509989 AIMP2Q13155 320 aaKnown RBP12.76□□□□□ -0.37
SNF8-206ENST00000509989 ZRSR2Q15696 482 aaKnown RBP12.76□□□□□ -0.37
SNF8-206ENST00000509989 TSNAXIP1Q2TAA8 658 aa12.76□□□□□ -0.37
SNF8-206ENST00000509989 TCHHL1Q5QJ38 904 aaPredicted RBP12.76□□□□□ -0.37
SNF8-206ENST00000509989 FCRLBQ6BAA4 426 aa12.76□□□□□ -0.37
SNF8-206ENST00000509989 NDUFAF7Q7L592 441 aa12.76□□□□□ -0.37
SNF8-206ENST00000509989 SIRT6Q8N6T7 355 aa12.76□□□□□ -0.37
SNF8-206ENST00000509989 FAM47BQ8NA70 645 aa12.76□□□□□ -0.37
SNF8-206ENST00000509989 WDR20Q8TBZ3 569 aa12.76□□□□□ -0.37
SNF8-206ENST00000509989 BRIX1Q8TDN6 353 aaKnown RBP12.76□□□□□ -0.37
SNF8-206ENST00000509989 ZNF483Q8TF39 744 aaPredicted RBP12.76□□□□□ -0.37
SNF8-206ENST00000509989 TBC1D20Q96BZ9 403 aa12.76□□□□□ -0.37
SNF8-206ENST00000509989 TMEM237Q96Q45 408 aa12.76□□□□□ -0.37
SNF8-206ENST00000509989 NPAS2Q99743 824 aa12.76□□□□□ -0.37
SNF8-206ENST00000509989 MAPKAP1Q9BPZ7 522 aa12.76□□□□□ -0.37
SNF8-206ENST00000509989 ZNF717Q9BY31 904 aaPredicted RBP12.76□□□□□ -0.37
SNF8-206ENST00000509989 REXO4Q9GZR2 422 aaKnown RBP12.76□□□□□ -0.37
SNF8-206ENST00000509989 ZNF700Q9H0M5 742 aa12.76□□□□□ -0.37
SNF8-206ENST00000509989 ACTR8Q9H981 624 aa12.76□□□□□ -0.37
SNF8-206ENST00000509989 FARSBQ9NSD9 589 aaKnown RBP12.76□□□□□ -0.37
SNF8-206ENST00000509989 FETUBQ9UGM5 382 aa12.76□□□□□ -0.37
SNF8-206ENST00000509989 EML6Q6ZMW3 1958 aa12.76□□□□□ -0.37
SNF8-206ENST00000509989 PRRC2CQ9Y520 2896 aaKnown RBP12.75□□□□□ -0.37
SNF8-206ENST00000509989 NSG1A0A0A6YYJ2 146 aa12.75□□□□□ -0.37
SNF8-206ENST00000509989 TLDC2A0PJX2 215 aa12.75□□□□□ -0.37
SNF8-206ENST00000509989 G3V2L1 256 aa12.75□□□□□ -0.37
SNF8-206ENST00000509989 STX16-NPEPL1H3BU86 382 aa12.75□□□□□ -0.37
SNF8-206ENST00000509989 STX16O14662 325 aa12.75□□□□□ -0.37
SNF8-206ENST00000509989 PRR35P0CG20 571 aa12.75□□□□□ -0.37
SNF8-206ENST00000509989 CREB1P16220 341 aa12.75□□□□□ -0.37
SNF8-206ENST00000509989 LIM2P55344 173 aa12.75□□□□□ -0.37
SNF8-206ENST00000509989 STXBP1P61764 594 aaKnown RBP12.75□□□□□ -0.37
SNF8-206ENST00000509989 TLE1Q04724 770 aa12.75□□□□□ -0.37
SNF8-206ENST00000509989 KLRB1Q12918 225 aa12.75□□□□□ -0.37
SNF8-206ENST00000509989 LAPTM5Q13571 262 aa12.75□□□□□ -0.37
SNF8-206ENST00000509989 ABRAXAS2Q15018 415 aa12.75□□□□□ -0.37
SNF8-206ENST00000509989 PLEKHN1Q494U1 663 aaPredicted RBP12.75□□□□□ -0.37
SNF8-206ENST00000509989 SFT2D3Q587I9 215 aa12.75□□□□□ -0.37
SNF8-206ENST00000509989 LETMD1Q6P1Q0 360 aa12.75□□□□□ -0.37
SNF8-206ENST00000509989 LINC00696Q6ZRV3 163 aa12.75□□□□□ -0.37
SNF8-206ENST00000509989 CPEB2Q7Z5Q1 589 aaKnown RBP12.75□□□□□ -0.37
SNF8-206ENST00000509989 CLNKQ7Z7G1 428 aa12.75□□□□□ -0.37
SNF8-206ENST00000509989 C4orf33Q8N1A6 199 aa12.75□□□□□ -0.37
SNF8-206ENST00000509989 L3MBTL4Q8NA19 623 aa12.75□□□□□ -0.37
SNF8-206ENST00000509989 PLPP5Q8NEB5 264 aa12.75□□□□□ -0.37
SNF8-206ENST00000509989 CATSPER1Q8NEC5 780 aa12.75□□□□□ -0.37
SNF8-206ENST00000509989 OR4F6Q8NGB9 312 aa12.75□□□□□ -0.37
SNF8-206ENST00000509989 MTBPQ96DY7 904 aa12.75□□□□□ -0.37
SNF8-206ENST00000509989 DMRT3Q9NQL9 472 aa12.75□□□□□ -0.37
SNF8-206ENST00000509989 PLA2G3Q9NZ20 509 aa12.75□□□□□ -0.37
SNF8-206ENST00000509989 KCMF1Q9P0J7 381 aa12.75□□□□□ -0.37
SNF8-206ENST00000509989 PTGFRNQ9P2B2 879 aa12.75□□□□□ -0.37
SNF8-206ENST00000509989 HEMK1Q9Y5R4 338 aaPredicted RBP12.75□□□□□ -0.37
SNF8-206ENST00000509989 IGKV3D-11A0A0A0MRZ8 115 aa12.74□□□□□ -0.37
SNF8-206ENST00000509989 ARHGAP10A1A4S6 786 aa12.74□□□□□ -0.37
SNF8-206ENST00000509989 CYR61O00622 381 aa12.74□□□□□ -0.37
SNF8-206ENST00000509989 PLPP1O14494 284 aa12.74□□□□□ -0.37
SNF8-206ENST00000509989 SMIM24O75264 130 aa12.74□□□□□ -0.37
SNF8-206ENST00000509989 EEDO75530 441 aaKnown RBP12.74□□□□□ -0.37
SNF8-206ENST00000509989 OR4F21O95013 312 aa12.74□□□□□ -0.37
SNF8-206ENST00000509989 GBAP04062 536 aa12.74□□□□□ -0.37
SNF8-206ENST00000509989 RNH1P13489 461 aaKnown RBP12.74□□□□□ -0.37
SNF8-206ENST00000509989 ATP5A1P25705 553 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms