RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 SPP1P10451 314 aa3.39□□□□□ -1.87
UBE2D3-225ENST00000508476 PTMSP20962 102 aa3.39□□□□□ -1.87
UBE2D3-225ENST00000508476 SLC1A4P43007 532 aa3.39□□□□□ -1.87
UBE2D3-225ENST00000508476 CRKLP46109 303 aaKnown RBP3.39□□□□□ -1.87
UBE2D3-225ENST00000508476 POU5F1Q01860 360 aaKnown RBP3.39□□□□□ -1.87
UBE2D3-225ENST00000508476 TNK1Q13470 666 aa3.39□□□□□ -1.87
UBE2D3-225ENST00000508476 ZNF273Q14593 569 aa3.39□□□□□ -1.87
UBE2D3-225ENST00000508476 TOMM20Q15388 145 aa3.39□□□□□ -1.87
UBE2D3-225ENST00000508476 NHLRC3Q5JS37 347 aa3.39□□□□□ -1.87
UBE2D3-225ENST00000508476 ZNF506Q5JVG8 444 aa3.39□□□□□ -1.87
UBE2D3-225ENST00000508476 TEX35Q5T0J7 233 aa3.39□□□□□ -1.87
UBE2D3-225ENST00000508476 RPUSD3Q6P087 351 aaKnown RBP3.39□□□□□ -1.87
UBE2D3-225ENST00000508476 MACC1Q6ZN28 852 aa3.39□□□□□ -1.87
UBE2D3-225ENST00000508476 TMUB2Q71RG4 321 aa3.39□□□□□ -1.87
UBE2D3-225ENST00000508476 GPR141Q7Z602 305 aa3.39□□□□□ -1.87
UBE2D3-225ENST00000508476 ABI3BPQ7Z7G0 1075 aa3.39□□□□□ -1.87
UBE2D3-225ENST00000508476 CCAR2Q8N163 923 aaKnown RBP3.39□□□□□ -1.87
UBE2D3-225ENST00000508476 KIAA1524Q8TCG1 905 aa3.39□□□□□ -1.87
UBE2D3-225ENST00000508476 SERAC1Q96JX3 654 aa3.39□□□□□ -1.87
UBE2D3-225ENST00000508476 TNFRSF13CQ96RJ3 184 aa3.39□□□□□ -1.87
UBE2D3-225ENST00000508476 TXLNGYQ9BZA5 131 aa3.39□□□□□ -1.87
UBE2D3-225ENST00000508476 DPEP2Q9H4A9 486 aa3.39□□□□□ -1.87
UBE2D3-225ENST00000508476 C10orf88Q9H8K7 445 aa3.39□□□□□ -1.87
UBE2D3-225ENST00000508476 MARCH7Q9H992 704 aa3.39□□□□□ -1.87
UBE2D3-225ENST00000508476 RPF1Q9H9Y2 349 aaKnown RBP3.39□□□□□ -1.87
UBE2D3-225ENST00000508476 PLEKHA3Q9HB20 300 aa3.39□□□□□ -1.87
UBE2D3-225ENST00000508476 HMGB1P1B2RPK0 211 aaPredicted RBP3.38□□□□□ -1.87
UBE2D3-225ENST00000508476 FAM86B1E9PN63 330 aa3.38□□□□□ -1.87
UBE2D3-225ENST00000508476 FAM86B2P0C5J1 330 aa3.38□□□□□ -1.87
UBE2D3-225ENST00000508476 PSMA3P25788 255 aa3.38□□□□□ -1.87
UBE2D3-225ENST00000508476 ELK3P41970 407 aa3.38□□□□□ -1.87
UBE2D3-225ENST00000508476 MATKP42679 507 aa3.38□□□□□ -1.87
UBE2D3-225ENST00000508476 CRYBA2P53672 197 aa3.38□□□□□ -1.87
UBE2D3-225ENST00000508476 POM121L1PQ3SYA9 428 aa3.38□□□□□ -1.87
UBE2D3-225ENST00000508476 C6orf136Q5SQH8 315 aa3.38□□□□□ -1.87
UBE2D3-225ENST00000508476 C15orf52Q6ZUT6 534 aaKnown RBP3.38□□□□□ -1.87
UBE2D3-225ENST00000508476 RAD54LQ92698 747 aa3.38□□□□□ -1.87
UBE2D3-225ENST00000508476 MRGBPQ9NV56 204 aa3.38□□□□□ -1.87
UBE2D3-225ENST00000508476 TMOD3Q9NYL9 352 aa3.38□□□□□ -1.87
UBE2D3-225ENST00000508476 DBF4Q9UBU7 674 aaPredicted RBP3.38□□□□□ -1.87
UBE2D3-225ENST00000508476 ZNF256Q9Y2P7 627 aaPredicted RBP3.38□□□□□ -1.87
UBE2D3-225ENST00000508476 ARHGEF11O15085 1522 aa3.38□□□□□ -1.87
UBE2D3-225ENST00000508476 ZNF732B4DXR9 585 aa3.37□□□□□ -1.87
UBE2D3-225ENST00000508476 TCP10L2B9ZVM9 353 aa3.37□□□□□ -1.87
UBE2D3-225ENST00000508476 FLRT2O43155 660 aa3.37□□□□□ -1.87
UBE2D3-225ENST00000508476 PPIP5K2O43314 1243 aa3.37□□□□□ -1.87
UBE2D3-225ENST00000508476 ANGPTL1O95841 491 aa3.37□□□□□ -1.87
UBE2D3-225ENST00000508476 DNTTP04053 509 aa3.37□□□□□ -1.87
UBE2D3-225ENST00000508476 HCKP08631 526 aa3.37□□□□□ -1.87
UBE2D3-225ENST00000508476 CHRNA3P32297 505 aa3.37□□□□□ -1.87
UBE2D3-225ENST00000508476 PEX3P56589 373 aa3.37□□□□□ -1.87
UBE2D3-225ENST00000508476 PTENP60484 403 aa3.37□□□□□ -1.87
UBE2D3-225ENST00000508476 UGCGQ16739 394 aa3.37□□□□□ -1.87
UBE2D3-225ENST00000508476 MUC21Q5SSG8 566 aa3.37□□□□□ -1.87
UBE2D3-225ENST00000508476 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.37□□□□□ -1.87
UBE2D3-225ENST00000508476 FAM46CQ5VWP2 391 aa3.37□□□□□ -1.87
UBE2D3-225ENST00000508476 SLC30A6Q6NXT4 461 aa3.37□□□□□ -1.87
UBE2D3-225ENST00000508476 C11orf57Q6ZUT1 292 aaPredicted RBP3.37□□□□□ -1.87
UBE2D3-225ENST00000508476 BANPQ8N9N5 519 aa3.37□□□□□ -1.87
UBE2D3-225ENST00000508476 OCC1Q8TAD7 63 aa3.37□□□□□ -1.87
UBE2D3-225ENST00000508476 GRK7Q8WTQ7 553 aa3.37□□□□□ -1.87
UBE2D3-225ENST00000508476 HEXDCQ8WVB3 486 aa3.37□□□□□ -1.87
UBE2D3-225ENST00000508476 ST6GALNAC6Q969X2 333 aa3.37□□□□□ -1.87
UBE2D3-225ENST00000508476 FER1L6-AS2Q96M78 137 aa3.37□□□□□ -1.87
UBE2D3-225ENST00000508476 ALKBH3Q96Q83 286 aaPredicted RBP3.37□□□□□ -1.87
UBE2D3-225ENST00000508476 APOL2Q9BQE5 337 aa3.37□□□□□ -1.87
UBE2D3-225ENST00000508476 KLF2Q9Y5W3 355 aaPredicted RBP3.37□□□□□ -1.87
UBE2D3-225ENST00000508476 GON4LQ3T8J9 2241 aa3.37□□□□□ -1.87
UBE2D3-225ENST00000508476 LOC390937A0A1W2PQ73 354 aa3.36□□□□□ -1.87
UBE2D3-225ENST00000508476 IGLON5A6NGN9 336 aa3.36□□□□□ -1.87
UBE2D3-225ENST00000508476 NPIPA3F8WFD2 350 aa3.36□□□□□ -1.87
UBE2D3-225ENST00000508476 FCGR3BO75015 233 aa3.36□□□□□ -1.87
UBE2D3-225ENST00000508476 CALCAP01258 141 aa3.36□□□□□ -1.87
UBE2D3-225ENST00000508476 IGHG1P01857 330 aa3.36□□□□□ -1.87
UBE2D3-225ENST00000508476 SP9P0CG40 484 aa3.36□□□□□ -1.87
UBE2D3-225ENST00000508476 FDPSP14324 419 aaKnown RBP3.36□□□□□ -1.87
UBE2D3-225ENST00000508476 ZNF19P17023 458 aa3.36□□□□□ -1.87
UBE2D3-225ENST00000508476 BACE1P56817 501 aa3.36□□□□□ -1.87
UBE2D3-225ENST00000508476 CNTN1Q12860 1018 aa3.36□□□□□ -1.87
UBE2D3-225ENST00000508476 MAPK11Q15759 364 aa3.36□□□□□ -1.87
UBE2D3-225ENST00000508476 CCL14Q16627 93 aa3.36□□□□□ -1.87
UBE2D3-225ENST00000508476 ECSCRQ19T08 205 aa3.36□□□□□ -1.87
UBE2D3-225ENST00000508476 TCEAL6Q6IPX3 200 aa3.36□□□□□ -1.87
UBE2D3-225ENST00000508476 ZNF770Q6IQ21 691 aaPredicted RBP3.36□□□□□ -1.87
UBE2D3-225ENST00000508476 C17orf107Q6ZR85 190 aa3.36□□□□□ -1.87
UBE2D3-225ENST00000508476 CHST3Q7LGC8 479 aa3.36□□□□□ -1.87
UBE2D3-225ENST00000508476 OR6T1Q8NGN1 323 aa3.36□□□□□ -1.87
UBE2D3-225ENST00000508476 OR1B1Q8NGR6 318 aa3.36□□□□□ -1.87
UBE2D3-225ENST00000508476 SMPDL3AQ92484 453 aa3.36□□□□□ -1.87
UBE2D3-225ENST00000508476 RUNDC3BQ96NL0 473 aa3.36□□□□□ -1.87
UBE2D3-225ENST00000508476 ZIM3Q96PE6 472 aa3.36□□□□□ -1.87
UBE2D3-225ENST00000508476 LIME1Q9H400 295 aa3.36□□□□□ -1.87
UBE2D3-225ENST00000508476 CHCHD3Q9NX63 227 aaKnown RBP3.36□□□□□ -1.87
UBE2D3-225ENST00000508476 THYN1Q9P016 225 aa3.36□□□□□ -1.87
UBE2D3-225ENST00000508476 DHRS4-AS1Q9P1J3 65 aa3.36□□□□□ -1.87
UBE2D3-225ENST00000508476 SPATA2Q9UM82 520 aa3.36□□□□□ -1.87
UBE2D3-225ENST00000508476 SNX7Q9UNH6 387 aa3.36□□□□□ -1.87
UBE2D3-225ENST00000508476 CCL27Q9Y4X3 112 aa3.36□□□□□ -1.87
UBE2D3-225ENST00000508476 POGZQ7Z3K3 1410 aa3.36□□□□□ -1.87
UBE2D3-225ENST00000508476 BAZ1AQ9NRL2 1556 aaPredicted RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms