RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 RBM38Q9H0Z9 239 aaKnown RBP7.66□□□□□ -1.18
SCN1A-207ENST00000507401 SLC26A1Q9H2B4 701 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 NPHS2Q9NP85 383 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 C8orf4Q9NR00 106 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 C5AR2Q9P296 337 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 IFT80Q9P2H3 777 aaPredicted RBP7.66□□□□□ -1.18
SCN1A-207ENST00000507401 MKL2Q9ULH7 1088 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 TP53TG5Q9Y2B4 290 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 MAD1L1Q9Y6D9 718 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 ANKRD12Q6UB98 2062 aa7.66□□□□□ -1.18
SCN1A-207ENST00000507401 SNRNP200O75643 2136 aaKnown RBP7.66□□□□□ -1.18
SCN1A-207ENST00000507401 C15orf38-AP3S2A0A0A6YYH1 394 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 A0A1B0GX78 115 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 ARGFXA6NJG6 315 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 ZNF839A8K0R7 811 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 B2RBV5 119 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 E5RI56 91 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 GFYI3L273 518 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 K7EM74 188 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 EIF3FO00303 357 aaPredicted RBP7.65□□□□□ -1.18
SCN1A-207ENST00000507401 PEX12O00623 359 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 FCHO1O14526 889 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 DNALI1O14645 258 aaPredicted RBP7.65□□□□□ -1.18
SCN1A-207ENST00000507401 DSCR3O14972 297 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 SLC22A2O15244 555 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 NIPSNAP2O75323 286 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 IGHA1P01876 353 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 CATP04040 527 aaKnown RBP7.65□□□□□ -1.18
SCN1A-207ENST00000507401 CTSBP07858 339 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 MPC1LP0DKB6 136 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 ERGP11308 486 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 ENO3P13929 434 aaPredicted RBP7.65□□□□□ -1.18
SCN1A-207ENST00000507401 ALAS2P22557 587 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 HMOX2P30519 316 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 CCL11P51671 97 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 PGDP52209 483 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 ESRRGP62508 458 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 DEFB110Q30KQ9 67 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 CCSMST1Q4G0I0 132 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 RNASEH2BQ5TBB1 312 aaKnown RBP7.65□□□□□ -1.18
SCN1A-207ENST00000507401 OGFRL1Q5TC84 451 aaPredicted RBP7.65□□□□□ -1.18
SCN1A-207ENST00000507401 IRAK1BP1Q5VVH5 260 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 ZNF470Q6ECI4 717 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 THOC7Q6I9Y2 204 aaKnown RBP7.65□□□□□ -1.18
SCN1A-207ENST00000507401 FBXO42Q6P3S6 717 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 CHSY3Q70JA7 882 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 OVCH1Q7RTY7 1134 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 ARPINQ7Z6K5 226 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 C2orf73Q8N5S3 287 aaPredicted RBP7.65□□□□□ -1.18
SCN1A-207ENST00000507401 PDPRQ8NCN5 879 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 RBM15BQ8NDT2 890 aaKnown RBP7.65□□□□□ -1.18
SCN1A-207ENST00000507401 OR2L3Q8NG85 312 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 ASB11Q8WXH4 323 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 SMPDL3AQ92484 453 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 FKBP10Q96AY3 582 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 ZNF669Q96BR6 464 aaPredicted RBP7.65□□□□□ -1.18
SCN1A-207ENST00000507401 HSH2DQ96JZ2 352 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 IL17FQ96PD4 163 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 WDR54Q9H977 334 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 ARL8BQ9NVJ2 186 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 RHBDL2Q9NX52 303 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 ANKMY1Q9P2S6 941 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 GALPQ9UBC7 116 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 RSL24D1Q9UHA3 163 aaKnown RBP7.65□□□□□ -1.18
SCN1A-207ENST00000507401 NDOR1Q9UHB4 597 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 MED13Q9UHV7 2174 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 PRPF19Q9UMS4 504 aaKnown RBP7.65□□□□□ -1.18
SCN1A-207ENST00000507401 DHRS7Q9Y394 339 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 ZNF451Q9Y4E5 1061 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 AP4S1Q9Y587 144 aa7.65□□□□□ -1.18
SCN1A-207ENST00000507401 A0A0G2JND7 137 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 GOLGA8QA0A0J9YX86 632 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 A0A1W2PPV9 198 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 HYKKA2RU49 373 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 GOLGA8OA6NCC3 632 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 GOLGA8NF8WBI6 632 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 GOLGA8MH3BSY2 632 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 TP73O15350 636 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 ZBTB14O43829 449 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 DPM1O60762 260 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 CTSVO60911 334 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 DNAJB5O75953 348 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 PROCP04070 461 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 FAM58BPP0C7Q3 252 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 ZNF23P17027 643 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 CMPK1P30085 196 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 RPA3P35244 121 aaPredicted RBP7.64□□□□□ -1.19
SCN1A-207ENST00000507401 FOLR3P41439 243 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 HK2P52789 917 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 ABATP80404 500 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 SLC18A2Q05940 514 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 PRDX1Q06830 199 aaKnown RBP7.64□□□□□ -1.19
SCN1A-207ENST00000507401 TBL3Q12788 808 aaKnown RBP7.64□□□□□ -1.19
SCN1A-207ENST00000507401 CTBP1Q13363 440 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 APOFQ13790 326 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 ZNF829Q3KNS6 432 aaPredicted RBP7.64□□□□□ -1.19
SCN1A-207ENST00000507401 C1orf189Q5VU69 101 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 CPZQ66K79 652 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 LRRC8EQ6NSJ5 796 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 UGT3A1Q6NUS8 523 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms