RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 KCMF1Q9P0J7 381 aa9□□□□□ -0.97
UBR4-216ENST00000494503 ASIC3Q9UHC3 531 aa9□□□□□ -0.97
UBR4-216ENST00000494503 ZFP69BQ9UJL9 534 aa9□□□□□ -0.97
UBR4-216ENST00000494503 NAV3Q8IVL0 2385 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 PHF3Q92576 2039 aaKnown RBP8.99□□□□□ -0.97
UBR4-216ENST00000494503 GOLGA6L10A0A0M3HER8 536 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 NPIPA2E9PIF3 369 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 NPIPA3F8WFD2 350 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 NRDCO43847 1150 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 TUBB4AP04350 444 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 TFEBP19484 476 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 CHRNB4P30926 498 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 SCTRP47872 440 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 SSR4P51571 173 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 ART1P52961 327 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 AP1S2P56377 157 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 PPIAP62937 165 aaKnown RBP8.99□□□□□ -0.97
UBR4-216ENST00000494503 PMPCAQ10713 525 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 BMPR2Q13873 1038 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 ZNF585AQ6P3V2 769 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 ARHGAP11AQ6P4F7 1023 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 PAOXQ6QHF9 649 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 MDGA2Q7Z553 956 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 FGD2Q7Z6J4 655 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 GAS2L3Q86XJ1 694 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 AGGF1Q8N302 714 aaeCLIP8.99□□□□□ -0.97
UBR4-216ENST00000494503 AFAP1L2Q8N4X5 818 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 FAM47BQ8NA70 645 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 TRPV3Q8NET8 790 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 B3GNT7Q8NFL0 401 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 ABHD11Q8NFV4 315 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 OR52N2Q8NGI0 321 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 OR5M9Q8NGP3 310 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 OR56A3Q8NH54 315 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 NT5CQ8TCD5 201 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 UTP15Q8TED0 518 aaKnown RBP8.99□□□□□ -0.97
UBR4-216ENST00000494503 GRK7Q8WTQ7 553 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 NCLNQ969V3 563 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 FBXL8Q96CD0 374 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 VMP1Q96GC9 406 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 OR4K3Q96R72 315 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 NAP1L3Q99457 506 aaPredicted RBP8.99□□□□□ -0.97
UBR4-216ENST00000494503 TP63Q9H3D4 680 aaPredicted RBP8.99□□□□□ -0.97
UBR4-216ENST00000494503 KLHL31Q9H511 634 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 EXO5Q9H790 373 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 COPS7BQ9H9Q2 264 aaPredicted RBP8.99□□□□□ -0.97
UBR4-216ENST00000494503 PRTFDC1Q9NRG1 225 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 ALKBH4Q9NXW9 302 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 ZFATQ9P243 1243 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 RNF6Q9Y252 685 aa8.99□□□□□ -0.97
UBR4-216ENST00000494503 MYOCOSA0A1B0GUC4 107 aa8.98□□□□□ -0.97
UBR4-216ENST00000494503 TCRBV16S1A1N1A0A5B0 115 aa8.98□□□□□ -0.97
UBR4-216ENST00000494503 NPEPPSL1A6NEC2 478 aa8.98□□□□□ -0.97
UBR4-216ENST00000494503 FOXO6A8MYZ6 492 aa8.98□□□□□ -0.97
UBR4-216ENST00000494503 PGRMC1O00264 195 aaKnown RBP8.98□□□□□ -0.97
UBR4-216ENST00000494503 CLDN4O14493 209 aa8.98□□□□□ -0.97
UBR4-216ENST00000494503 ADAM10O14672 748 aa8.98□□□□□ -0.97
UBR4-216ENST00000494503 CLGNO14967 610 aa8.98□□□□□ -0.97
UBR4-216ENST00000494503 ERI3O43414 337 aaKnown RBP8.98□□□□□ -0.97
UBR4-216ENST00000494503 H2AFYO75367 372 aaKnown RBP8.98□□□□□ -0.97
UBR4-216ENST00000494503 OR2J2O76002 312 aa8.98□□□□□ -0.97
UBR4-216ENST00000494503 WDR47O94967 919 aa8.98□□□□□ -0.97
UBR4-216ENST00000494503 TNNI3P19429 210 aa8.98□□□□□ -0.97
UBR4-216ENST00000494503 PPP2R1BP30154 601 aa8.98□□□□□ -0.97
UBR4-216ENST00000494503 AHRP35869 848 aa8.98□□□□□ -0.97
UBR4-216ENST00000494503 STXBP1P61764 594 aaKnown RBP8.98□□□□□ -0.97
UBR4-216ENST00000494503 REEP5Q00765 189 aa8.98□□□□□ -0.97
UBR4-216ENST00000494503 CMPK2Q5EBM0 449 aa8.98□□□□□ -0.97
UBR4-216ENST00000494503 SPANXN3Q5MJ09 141 aa8.98□□□□□ -0.97
UBR4-216ENST00000494503 IL20RBQ6UXL0 311 aa8.98□□□□□ -0.97
UBR4-216ENST00000494503 C16orf47Q6ZP98 133 aaPredicted RBP8.98□□□□□ -0.97
UBR4-216ENST00000494503 THOC6Q86W42 341 aaKnown RBP8.98□□□□□ -0.97
UBR4-216ENST00000494503 ZNF227Q86WZ6 799 aa8.98□□□□□ -0.97
UBR4-216ENST00000494503 CA13Q8N1Q1 262 aa8.98□□□□□ -0.97
UBR4-216ENST00000494503 RPRMLQ8N4K4 120 aa8.98□□□□□ -0.97
UBR4-216ENST00000494503 MARVELD2Q8N4S9 558 aa8.98□□□□□ -0.97
UBR4-216ENST00000494503 NAT8LQ8N9F0 302 aa8.98□□□□□ -0.97
UBR4-216ENST00000494503 ANKRD53Q8N9V6 530 aa8.98□□□□□ -0.97
UBR4-216ENST00000494503 PSD4Q8NDX1 1056 aa8.98□□□□□ -0.97
UBR4-216ENST00000494503 CERS2Q96G23 380 aa8.98□□□□□ -0.97
UBR4-216ENST00000494503 SEC16BQ96JE7 1060 aa8.98□□□□□ -0.97
UBR4-216ENST00000494503 SIGLEC10Q96LC7 697 aa8.98□□□□□ -0.97
UBR4-216ENST00000494503 ENKD1Q9H0I2 346 aa8.98□□□□□ -0.97
UBR4-216ENST00000494503 LDAHQ9H6V9 325 aa8.98□□□□□ -0.97
UBR4-216ENST00000494503 PELI2Q9HAT8 420 aa8.98□□□□□ -0.97
UBR4-216ENST00000494503 SLC22A14Q9Y267 594 aa8.98□□□□□ -0.97
UBR4-216ENST00000494503 MRPS33Q9Y291 106 aaKnown RBP8.98□□□□□ -0.97
UBR4-216ENST00000494503 KCNE2Q9Y6J6 123 aa8.98□□□□□ -0.97
UBR4-216ENST00000494503 CLCA3PQ9Y6N3 262 aa8.98□□□□□ -0.97
UBR4-216ENST00000494503 ZFHX3Q15911 3703 aa8.97□□□□□ -0.97
UBR4-216ENST00000494503 ABCA4P78363 2273 aa8.97□□□□□ -0.97
UBR4-216ENST00000494503 A0A088AWK7 358 aa8.97□□□□□ -0.97
UBR4-216ENST00000494503 CTAGE15A4D2H0 777 aa8.97□□□□□ -0.97
UBR4-216ENST00000494503 NCF1BA6NI72 391 aaPredicted RBP8.97□□□□□ -0.97
UBR4-216ENST00000494503 NCF1CA8MVU1 366 aaPredicted RBP8.97□□□□□ -0.97
UBR4-216ENST00000494503 WWP2O00308 870 aa8.97□□□□□ -0.97
UBR4-216ENST00000494503 B3GALT2O43825 422 aa8.97□□□□□ -0.97
UBR4-216ENST00000494503 ZFAND5O76080 213 aa8.97□□□□□ -0.97
UBR4-216ENST00000494503 TTC4O95801 387 aa8.97□□□□□ -0.97
UBR4-216ENST00000494503 AHSGP02765 367 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms