RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 ZNF763Q0D2J5 394 aa12.58□□□□□ -0.4
SNX12-205ENST00000490561 SQLEQ14534 574 aa12.58□□□□□ -0.4
SNX12-205ENST00000490561 SLC9A5Q14940 896 aa12.58□□□□□ -0.4
SNX12-205ENST00000490561 RPS6KA2Q15349 733 aa12.58□□□□□ -0.4
SNX12-205ENST00000490561 RFTN2Q52LD8 501 aaPredicted RBP12.58□□□□□ -0.4
SNX12-205ENST00000490561 PDCD4Q53EL6 469 aaKnown RBP12.58□□□□□ -0.4
SNX12-205ENST00000490561 CCNYL2Q5T2Q4 361 aa12.58□□□□□ -0.4
SNX12-205ENST00000490561 IL23RQ5VWK5 629 aa12.58□□□□□ -0.4
SNX12-205ENST00000490561 FAM219BQ5XKK7 198 aa12.58□□□□□ -0.4
SNX12-205ENST00000490561 PRMT9Q6P2P2 845 aa12.58□□□□□ -0.4
SNX12-205ENST00000490561 IKBIPQ70UQ0 350 aa12.58□□□□□ -0.4
SNX12-205ENST00000490561 UBE3DQ7Z6J8 389 aa12.58□□□□□ -0.4
SNX12-205ENST00000490561 TMEM126BQ8IUX1 230 aa12.58□□□□□ -0.4
SNX12-205ENST00000490561 ARHGEF39Q8N4T4 335 aa12.58□□□□□ -0.4
SNX12-205ENST00000490561 PROKR1Q8TCW9 393 aa12.58□□□□□ -0.4
SNX12-205ENST00000490561 MACROD1Q9BQ69 325 aa12.58□□□□□ -0.4
SNX12-205ENST00000490561 DDA1Q9BW61 102 aa12.58□□□□□ -0.4
SNX12-205ENST00000490561 ASPSCR1Q9BZE9 553 aa12.58□□□□□ -0.4
SNX12-205ENST00000490561 BRINP2Q9C0B6 783 aa12.58□□□□□ -0.4
SNX12-205ENST00000490561 PRDM7Q9NQW5 492 aa12.58□□□□□ -0.4
SNX12-205ENST00000490561 TXLNGQ9NUQ3 528 aa12.58□□□□□ -0.4
SNX12-205ENST00000490561 AIG1Q9NVV5 245 aa12.58□□□□□ -0.4
SNX12-205ENST00000490561 OCIAD1Q9NX40 245 aa12.58□□□□□ -0.4
SNX12-205ENST00000490561 MS4A12Q9NXJ0 267 aa12.58□□□□□ -0.4
SNX12-205ENST00000490561 SLC39A1Q9NY26 324 aa12.58□□□□□ -0.4
SNX12-205ENST00000490561 HEY2Q9UBP5 337 aa12.58□□□□□ -0.4
SNX12-205ENST00000490561 PHF11Q9UIL8 331 aa12.58□□□□□ -0.4
SNX12-205ENST00000490561 POLR3HQ9Y535 204 aaPredicted RBP12.58□□□□□ -0.4
SNX12-205ENST00000490561 A0A0A6YYD5 115 aa12.57□□□□□ -0.4
SNX12-205ENST00000490561 A0A1B0GX78 115 aa12.57□□□□□ -0.4
SNX12-205ENST00000490561 BLACEA4D250 179 aa12.57□□□□□ -0.4
SNX12-205ENST00000490561 PLD2O14939 933 aa12.57□□□□□ -0.4
SNX12-205ENST00000490561 ZNF749O43361 778 aa12.57□□□□□ -0.4
SNX12-205ENST00000490561 CPNE3O75131 537 aaKnown RBP12.57□□□□□ -0.4
SNX12-205ENST00000490561 SCRG1O75711 98 aa12.57□□□□□ -0.4
SNX12-205ENST00000490561 KLHL18O94889 574 aa12.57□□□□□ -0.4
SNX12-205ENST00000490561 KLK1P06870 262 aa12.57□□□□□ -0.4
SNX12-205ENST00000490561 PIM1P11309 404 aaPredicted RBP12.57□□□□□ -0.4
SNX12-205ENST00000490561 BCKDHAP12694 445 aa12.57□□□□□ -0.4
SNX12-205ENST00000490561 NCF2P19878 526 aaPredicted RBP12.57□□□□□ -0.4
SNX12-205ENST00000490561 GCGRP47871 477 aa12.57□□□□□ -0.4
SNX12-205ENST00000490561 MAPK12P53778 367 aa12.57□□□□□ -0.4
SNX12-205ENST00000490561 RAB8AP61006 207 aa12.57□□□□□ -0.4
SNX12-205ENST00000490561 BTN3A2P78410 334 aa12.57□□□□□ -0.4
SNX12-205ENST00000490561 DEFB134Q4QY38 66 aa12.57□□□□□ -0.4
SNX12-205ENST00000490561 DCAF12Q5T6F0 453 aa12.57□□□□□ -0.4
SNX12-205ENST00000490561 TMEM164Q5U3C3 297 aa12.57□□□□□ -0.4
SNX12-205ENST00000490561 RHBDD2Q6NTF9 364 aa12.57□□□□□ -0.4
SNX12-205ENST00000490561 MIER2Q8N344 545 aa12.57□□□□□ -0.4
SNX12-205ENST00000490561 CPSF7Q8N684 471 aaKnown RBP12.57□□□□□ -0.4
SNX12-205ENST00000490561 ACOT4Q8N9L9 421 aa12.57□□□□□ -0.4
SNX12-205ENST00000490561 FAM122AQ96E09 287 aa12.57□□□□□ -0.4
SNX12-205ENST00000490561 C10orf90Q96M02 699 aa12.57□□□□□ -0.4
SNX12-205ENST00000490561 TAAR9Q96RI9 348 aa12.57□□□□□ -0.4
SNX12-205ENST00000490561 C1orf50Q9BV19 199 aa12.57□□□□□ -0.4
SNX12-205ENST00000490561 FAIM2Q9BWQ8 316 aa12.57□□□□□ -0.4
SNX12-205ENST00000490561 ZNF717Q9BY31 904 aaPredicted RBP12.57□□□□□ -0.4
SNX12-205ENST00000490561 AICDAQ9GZX7 198 aa12.57□□□□□ -0.4
SNX12-205ENST00000490561 ACTR5Q9H9F9 607 aaPredicted RBP12.57□□□□□ -0.4
SNX12-205ENST00000490561 LYRM4Q9HD34 91 aa12.57□□□□□ -0.4
SNX12-205ENST00000490561 MYNNQ9NPC7 610 aa12.57□□□□□ -0.4
SNX12-205ENST00000490561 PRDM9Q9NQV7 894 aa12.57□□□□□ -0.4
SNX12-205ENST00000490561 STARD5Q9NSY2 213 aa12.57□□□□□ -0.4
SNX12-205ENST00000490561 ZIM2Q9NZV7 527 aa12.57□□□□□ -0.4
SNX12-205ENST00000490561 GIMAP2Q9UG22 337 aa12.57□□□□□ -0.4
SNX12-205ENST00000490561 COL27A1Q8IZC6 1860 aaPredicted RBP12.57□□□□□ -0.4
SNX12-205ENST00000490561 ADAMTS20P59510 1910 aa12.56□□□□□ -0.4
SNX12-205ENST00000490561 ZFHX2Q9C0A1 2572 aaPredicted RBP12.56□□□□□ -0.4
SNX12-205ENST00000490561 RTCAO00442 366 aaKnown RBP12.56□□□□□ -0.4
SNX12-205ENST00000490561 ALDOCP09972 364 aaKnown RBP12.56□□□□□ -0.4
SNX12-205ENST00000490561 TPP2P29144 1249 aaPredicted RBP12.56□□□□□ -0.4
SNX12-205ENST00000490561 HPCAL1P37235 193 aa12.56□□□□□ -0.4
SNX12-205ENST00000490561 CLNS1AP54105 237 aaKnown RBP12.56□□□□□ -0.4
SNX12-205ENST00000490561 C21orf58P58505 322 aa12.56□□□□□ -0.4
SNX12-205ENST00000490561 RAE1P78406 368 aaKnown RBP12.56□□□□□ -0.4
SNX12-205ENST00000490561 SF3A3Q12874 501 aaKnown RBP eCLIP12.56□□□□□ -0.4
SNX12-205ENST00000490561 HEPACAMQ14CZ8 416 aa12.56□□□□□ -0.4
SNX12-205ENST00000490561 TTLL10Q6ZVT0 673 aa12.56□□□□□ -0.4
SNX12-205ENST00000490561 ALYREFQ86V81 257 aaKnown RBP12.56□□□□□ -0.4
SNX12-205ENST00000490561 LIX1Q8N485 282 aa12.56□□□□□ -0.4
SNX12-205ENST00000490561 GLB1L3Q8NCI6 653 aaPredicted RBP12.56□□□□□ -0.4
SNX12-205ENST00000490561 LRFN5Q96NI6 719 aa12.56□□□□□ -0.4
SNX12-205ENST00000490561 CATSPER2Q96P56 530 aa12.56□□□□□ -0.4
SNX12-205ENST00000490561 LRRC37BQ96QE4 947 aa12.56□□□□□ -0.4
SNX12-205ENST00000490561 ZBTB18Q99592 522 aa12.56□□□□□ -0.4
SNX12-205ENST00000490561 DPH2Q9BQC3 489 aaPredicted RBP12.56□□□□□ -0.4
SNX12-205ENST00000490561 LHX9Q9NQ69 397 aa12.56□□□□□ -0.4
SNX12-205ENST00000490561 SDR39U1Q9NRG7 319 aaPredicted RBP12.56□□□□□ -0.4
SNX12-205ENST00000490561 NAALAD2Q9Y3Q0 740 aa12.56□□□□□ -0.4
SNX12-205ENST00000490561 PCDHGA8Q9Y5G5 932 aa12.56□□□□□ -0.4
SNX12-205ENST00000490561 PCDHGA3Q9Y5H0 932 aa12.56□□□□□ -0.4
SNX12-205ENST00000490561 GPR45Q9Y5Y3 372 aa12.56□□□□□ -0.4
SNX12-205ENST00000490561 FAM186AA6NE01 2351 aa12.55□□□□□ -0.4
SNX12-205ENST00000490561 C4orf51C9J302 202 aa12.55□□□□□ -0.4
SNX12-205ENST00000490561 FCHO1O14526 889 aa12.55□□□□□ -0.4
SNX12-205ENST00000490561 EEDO75530 441 aaKnown RBP12.55□□□□□ -0.4
SNX12-205ENST00000490561 CTSBP07858 339 aa12.55□□□□□ -0.4
SNX12-205ENST00000490561 FAM58BPP0C7Q3 252 aa12.55□□□□□ -0.4
SNX12-205ENST00000490561 G6PDP11413 515 aa12.55□□□□□ -0.4
SNX12-205ENST00000490561 CCL4P13236 92 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms