RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 ERI3O43414 337 aaKnown RBP13.36□□□□□ -0.27
COL9A2-208ENST00000488463 KLHL41O60662 606 aa13.36□□□□□ -0.27
COL9A2-208ENST00000488463 CDC123O75794 336 aaPredicted RBP13.36□□□□□ -0.27
COL9A2-208ENST00000488463 SLU7O95391 586 aaKnown RBP13.36□□□□□ -0.27
COL9A2-208ENST00000488463 ALPPP05187 535 aa13.36□□□□□ -0.27
COL9A2-208ENST00000488463 RBP1P09455 135 aa13.36□□□□□ -0.27
COL9A2-208ENST00000488463 ITGAMP11215 1152 aa13.36□□□□□ -0.27
COL9A2-208ENST00000488463 GFAPP14136 432 aa13.36□□□□□ -0.27
COL9A2-208ENST00000488463 EPB42P16452 691 aa13.36□□□□□ -0.27
COL9A2-208ENST00000488463 BTN3A2P78410 334 aa13.36□□□□□ -0.27
COL9A2-208ENST00000488463 BTG2P78543 158 aa13.36□□□□□ -0.27
COL9A2-208ENST00000488463 LAPTM5Q13571 262 aa13.36□□□□□ -0.27
COL9A2-208ENST00000488463 PAGE2BQ5JRK9 111 aa13.36□□□□□ -0.27
COL9A2-208ENST00000488463 AGAP7PQ5VUJ5 663 aa13.36□□□□□ -0.27
COL9A2-208ENST00000488463 GRHL2Q6ISB3 625 aa13.36□□□□□ -0.27
COL9A2-208ENST00000488463 METTL2BQ6P1Q9 378 aaKnown RBP13.36□□□□□ -0.27
COL9A2-208ENST00000488463 KLC3Q6P597 504 aa13.36□□□□□ -0.27
COL9A2-208ENST00000488463 QSOX2Q6ZRP7 698 aa13.36□□□□□ -0.27
COL9A2-208ENST00000488463 RIPOR1Q6ZS17 1223 aa13.36□□□□□ -0.27
COL9A2-208ENST00000488463 TAOK1Q7L7X3 1001 aa13.36□□□□□ -0.27
COL9A2-208ENST00000488463 RNF175Q8N4F7 328 aa13.36□□□□□ -0.27
COL9A2-208ENST00000488463 PTGR2Q8N8N7 351 aaPredicted RBP13.36□□□□□ -0.27
COL9A2-208ENST00000488463 TMEM52Q8NDY8 209 aa13.36□□□□□ -0.27
COL9A2-208ENST00000488463 BRIX1Q8TDN6 353 aaKnown RBP13.36□□□□□ -0.27
COL9A2-208ENST00000488463 AGAP4Q96P64 663 aa13.36□□□□□ -0.27
COL9A2-208ENST00000488463 F2RL3Q96RI0 385 aa13.36□□□□□ -0.27
COL9A2-208ENST00000488463 TUBB6Q9BUF5 446 aa13.36□□□□□ -0.27
COL9A2-208ENST00000488463 REXO4Q9GZR2 422 aaKnown RBP13.36□□□□□ -0.27
COL9A2-208ENST00000488463 CLMPQ9H6B4 373 aa13.36□□□□□ -0.27
COL9A2-208ENST00000488463 PRDM7Q9NQW5 492 aa13.36□□□□□ -0.27
COL9A2-208ENST00000488463 CPSF2Q9P2I0 782 aaKnown RBP13.36□□□□□ -0.27
COL9A2-208ENST00000488463 PLAAQ9Y263 795 aa13.36□□□□□ -0.27
COL9A2-208ENST00000488463 TSC22D4Q9Y3Q8 395 aa13.36□□□□□ -0.27
COL9A2-208ENST00000488463 CENPEQ02224 2701 aa13.36□□□□□ -0.27
COL9A2-208ENST00000488463 SVILO95425 2214 aa13.36□□□□□ -0.27
COL9A2-208ENST00000488463 DOPEY1Q5JWR5 2465 aa13.35□□□□□ -0.27
COL9A2-208ENST00000488463 TGFBR3LH3BV60 316 aa13.35□□□□□ -0.27
COL9A2-208ENST00000488463 OR7A17O14581 309 aa13.35□□□□□ -0.27
COL9A2-208ENST00000488463 SEC24DO94855 1032 aaPredicted RBP13.35□□□□□ -0.27
COL9A2-208ENST00000488463 RNH1P13489 461 aaKnown RBP13.35□□□□□ -0.27
COL9A2-208ENST00000488463 HNRNPFP52597 415 aaKnown RBP13.35□□□□□ -0.27
COL9A2-208ENST00000488463 SKP1P63208 163 aa13.35□□□□□ -0.27
COL9A2-208ENST00000488463 KCNC4Q03721 635 aa13.35□□□□□ -0.27
COL9A2-208ENST00000488463 MFAP5Q13361 173 aa13.35□□□□□ -0.27
COL9A2-208ENST00000488463 GTF2H2Q13888 395 aa13.35□□□□□ -0.27
COL9A2-208ENST00000488463 ABRAXAS2Q15018 415 aa13.35□□□□□ -0.27
COL9A2-208ENST00000488463 TSNAXIP1Q2TAA8 658 aa13.35□□□□□ -0.27
COL9A2-208ENST00000488463 PRR30Q53SZ7 412 aaPredicted RBP13.35□□□□□ -0.27
COL9A2-208ENST00000488463 TEX35Q5T0J7 233 aa13.35□□□□□ -0.27
COL9A2-208ENST00000488463 PLAG1Q6DJT9 500 aa13.35□□□□□ -0.27
COL9A2-208ENST00000488463 H3F3CQ6NXT2 135 aa13.35□□□□□ -0.27
COL9A2-208ENST00000488463 GTF2H2CQ6P1K8 395 aa13.35□□□□□ -0.27
COL9A2-208ENST00000488463 ZNF793Q6ZN11 406 aa13.35□□□□□ -0.27
COL9A2-208ENST00000488463 SH2D5Q6ZV89 423 aa13.35□□□□□ -0.27
COL9A2-208ENST00000488463 GOLGA7Q7Z5G4 137 aa13.35□□□□□ -0.27
COL9A2-208ENST00000488463 CUZD1Q86UP6 607 aa13.35□□□□□ -0.27
COL9A2-208ENST00000488463 L3MBTL4Q8NA19 623 aa13.35□□□□□ -0.27
COL9A2-208ENST00000488463 METTL21AQ8WXB1 218 aa13.35□□□□□ -0.27
COL9A2-208ENST00000488463 MTBPQ96DY7 904 aa13.35□□□□□ -0.27
COL9A2-208ENST00000488463 LMF1Q96S06 567 aa13.35□□□□□ -0.27
COL9A2-208ENST00000488463 MRPL57Q9BQC6 102 aaKnown RBP13.35□□□□□ -0.27
COL9A2-208ENST00000488463 NPLQ9BXD5 320 aaPredicted RBP13.35□□□□□ -0.27
COL9A2-208ENST00000488463 ZBTB26Q9HCK0 441 aa13.35□□□□□ -0.27
COL9A2-208ENST00000488463 LUZP4Q9P127 313 aa13.35□□□□□ -0.27
COL9A2-208ENST00000488463 PCTPQ9UKL6 214 aa13.35□□□□□ -0.27
COL9A2-208ENST00000488463 B3GNT3Q9Y2A9 372 aa13.35□□□□□ -0.27
COL9A2-208ENST00000488463 DOPEY2Q9Y3R5 2298 aa13.35□□□□□ -0.27
COL9A2-208ENST00000488463 ESPL1Q14674 2120 aa13.34□□□□□ -0.27
COL9A2-208ENST00000488463 TCRBV16S1A1N1A0A5B0 115 aa13.34□□□□□ -0.27
COL9A2-208ENST00000488463 H0YIV9 168 aa13.34□□□□□ -0.27
COL9A2-208ENST00000488463 STX16-NPEPL1H3BU86 382 aa13.34□□□□□ -0.27
COL9A2-208ENST00000488463 CYR61O00622 381 aa13.34□□□□□ -0.27
COL9A2-208ENST00000488463 STX16O14662 325 aa13.34□□□□□ -0.27
COL9A2-208ENST00000488463 UGDHO60701 494 aa13.34□□□□□ -0.27
COL9A2-208ENST00000488463 B4GALT2O60909 372 aa13.34□□□□□ -0.27
COL9A2-208ENST00000488463 SCELO95171 688 aa13.34□□□□□ -0.27
COL9A2-208ENST00000488463 SHBGP04278 402 aa13.34□□□□□ -0.27
COL9A2-208ENST00000488463 RPS17P08708 135 aaKnown RBP13.34□□□□□ -0.27
COL9A2-208ENST00000488463 MAOAP21397 527 aa13.34□□□□□ -0.27
COL9A2-208ENST00000488463 CERS1P27544 350 aa13.34□□□□□ -0.27
COL9A2-208ENST00000488463 PLA2G16P53816 162 aa13.34□□□□□ -0.27
COL9A2-208ENST00000488463 NSDHLQ15738 373 aa13.34□□□□□ -0.27
COL9A2-208ENST00000488463 SFT2D3Q587I9 215 aa13.34□□□□□ -0.27
COL9A2-208ENST00000488463 MFSD4BQ5TF39 518 aa13.34□□□□□ -0.27
COL9A2-208ENST00000488463 LIPJQ5W064 366 aa13.34□□□□□ -0.27
COL9A2-208ENST00000488463 MED27Q6P2C8 311 aa13.34□□□□□ -0.27
COL9A2-208ENST00000488463 ISLR2Q6UXK2 745 aa13.34□□□□□ -0.27
COL9A2-208ENST00000488463 SCUBE1Q8IWY4 988 aa13.34□□□□□ -0.27
COL9A2-208ENST00000488463 OR52B6Q8NGF0 335 aa13.34□□□□□ -0.27
COL9A2-208ENST00000488463 PPP4R1Q8TF05 950 aa13.34□□□□□ -0.27
COL9A2-208ENST00000488463 CCT6BQ92526 530 aa13.34□□□□□ -0.27
COL9A2-208ENST00000488463 UBE2E3Q969T4 207 aa13.34□□□□□ -0.27
COL9A2-208ENST00000488463 PHF21BQ96EK2 531 aa13.34□□□□□ -0.27
COL9A2-208ENST00000488463 NSUN5Q96P11 429 aaKnown RBP13.34□□□□□ -0.27
COL9A2-208ENST00000488463 BARD1Q99728 777 aaKnown RBP13.34□□□□□ -0.27
COL9A2-208ENST00000488463 NPAS2Q99743 824 aa13.34□□□□□ -0.27
COL9A2-208ENST00000488463 C1QTNF3Q9BXJ4 246 aa13.34□□□□□ -0.27
COL9A2-208ENST00000488463 MRPL46Q9H2W6 279 aaKnown RBP13.34□□□□□ -0.27
COL9A2-208ENST00000488463 IPPKQ9H8X2 491 aa13.34□□□□□ -0.27
COL9A2-208ENST00000488463 NECTIN3Q9NQS3 549 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms