RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 CCDC3Q9BQI4 270 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 SHARPINQ9H0F6 387 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 ABCG4Q9H172 646 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 WDR13Q9H1Z4 485 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 TLE6Q9H808 572 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 Q9H8V8 135 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 COPS7BQ9H9Q2 264 aaPredicted RBP3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 DNAJC4Q9NNZ3 241 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 C2orf42Q9NWW7 574 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 QPCTLQ9NXS2 382 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 OR6C2Q9NZP2 312 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 SPATA7Q9P0W8 599 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 ATXN10Q9UBB4 475 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 EPHA6Q9UF33 1036 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 LEF1Q9UJU2 399 aaPredicted RBP3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 CDH7Q9ULB5 785 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 HPCAL4Q9UM19 191 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 CHKBQ9Y259 395 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 USP16Q9Y5T5 823 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 R4GN57 208 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 ADCY10Q96PN6 1610 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 OVOS2A0A0G2JMS6 1433 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 OVOS2A0A0J9YW53 1432 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 OVOS2Q6IE36 1432 aa3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 ZC3H13Q5T200 1668 aaKnown RBP3.43□□□□□ -1.86
ECHDC1-217ENST00000488087 CHD2O14647 1828 aaKnown RBP3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 CEP152O94986 1710 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 SBNO1A3KN83 1393 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 TARBP1Q13395 1621 aaKnown RBP3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 MYO3AQ8NEV4 1616 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 A0A1W2PPW3 197 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 CCDC162PA2VCL2 907 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 LRRIQ3A6PVS8 624 aaPredicted RBP3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 SLCO1B7G3V0H7 640 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 NDUFAB1O14561 156 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 BIRC5O15392 142 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 FMO6PO60774 539 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 N4BP1O75113 896 aaKnown RBP3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 GLRA3O75311 464 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 HMMRO75330 724 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 BAG3O95817 575 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 FAM107AO95990 144 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 IGLV1-44P01699 117 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 GSTA2P09210 222 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 FAM58BPP0C7Q3 252 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 SPP1P10451 314 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 DESP17661 470 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 EPORP19235 508 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 CD27P26842 260 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 ALDH3A1P30838 453 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 PRKCIP41743 596 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 CRKLP46109 303 aaKnown RBP3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 RGS7P49802 495 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 MFAP3P55082 362 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 GNG11P61952 73 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 MRPS25P82663 173 aaKnown RBP3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 AP1B1Q10567 949 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 NONOQ15233 471 aaKnown RBP eCLIP3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 E2F5Q15329 346 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 ZFP69Q49AA0 526 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 PDLIM3Q53GG5 364 aaPredicted RBP3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 PWWP2BQ6NUJ5 590 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 BHLHB9Q6PI77 547 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 TMEM207Q6UWW9 146 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 CCDC73Q6ZRK6 1079 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 Q6ZSR9 355 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 PIWIL3Q7Z3Z3 882 aaKnown RBP3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 AMIGO1Q86WK6 493 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 FAM219AQ8IW50 185 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 CD302Q8IX05 232 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 IQCF2Q8IXL9 164 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 KLHL7Q8IXQ5 586 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 LMNTD2Q8IXW0 634 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 ARHGAP18Q8N392 663 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 KLHDC1Q8N7A1 406 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 ATAD1Q8NBU5 361 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 DBF4BQ8NFT6 615 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 SLC26A7Q8TE54 656 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 NSMAFQ92636 917 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 RAD54LQ92698 747 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 CORO2AQ92828 525 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 DNASE1L2Q92874 299 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 MR1Q95460 341 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 CENPTQ96BT3 561 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 GMPPAQ96IJ6 420 aaPredicted RBP3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 CFAP53Q96M91 514 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 GDAP1L1Q96MZ0 367 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 SPATA33Q96N06 139 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 INTS14Q96SY0 518 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 NAP1L3Q99457 506 aaPredicted RBP3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 API5Q9BZZ5 524 aaKnown RBP3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 TRIM4Q9C037 500 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 FAM192AQ9GZU8 254 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 SNX25Q9H3E2 840 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 FGF22Q9HCT0 170 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 DMAP1Q9NPF5 467 aaPredicted RBP3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 MTRRQ9UBK8 725 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 DNAJB9Q9UBS3 223 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 ERRFI1Q9UJM3 462 aaPredicted RBP3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 PPP2R2CQ9Y2T4 447 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms