RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 MRNIPQ6NTE8 343 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 IL20RBQ6UXL0 311 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 RTL4Q6ZR62 310 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 CLEC17AQ6ZS10 378 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 FAM47EQ6ZV65 393 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 C17orf64Q86WR6 236 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 SHISA5Q8N114 240 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 LIX1Q8N485 282 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 TMEM251Q8N6I4 163 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 GPATCH11Q8N954 259 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 GOLM1Q8NBJ4 401 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 NFAM1Q8NET5 270 aaPredicted RBP7.1□□□□□ -1.27
PDPN-205ENST00000487038 SMPDL3BQ92485 455 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 HSPBAP1Q96EW2 488 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 ZNF778Q96MU6 729 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 MACROD1Q9BQ69 325 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 AARSD1Q9BTE6 412 aaKnown RBP7.1□□□□□ -1.27
PDPN-205ENST00000487038 CLK4Q9HAZ1 481 aaKnown RBP7.1□□□□□ -1.27
PDPN-205ENST00000487038 SACM1LQ9NTJ5 587 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 ABHD10Q9NUJ1 306 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 MARCH4Q9P2E8 410 aaPredicted RBP7.1□□□□□ -1.27
PDPN-205ENST00000487038 ADAM21Q9UKJ8 722 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 EIF3LQ9Y262 564 aaKnown RBP7.1□□□□□ -1.27
PDPN-205ENST00000487038 VPS9D1Q9Y2B5 631 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 A8MUA0 341 aa7.09□□□□□ -1.27
PDPN-205ENST00000487038 CHST10O43529 356 aa7.09□□□□□ -1.27
PDPN-205ENST00000487038 CEP104O60308 925 aa7.09□□□□□ -1.27
PDPN-205ENST00000487038 OR2J2O76002 312 aa7.09□□□□□ -1.27
PDPN-205ENST00000487038 P04436 131 aa7.09□□□□□ -1.27
PDPN-205ENST00000487038 MPC1LP0DKB6 136 aa7.09□□□□□ -1.27
PDPN-205ENST00000487038 RNH1P13489 461 aaKnown RBP7.09□□□□□ -1.27
PDPN-205ENST00000487038 ENO3P13929 434 aaPredicted RBP7.09□□□□□ -1.27
PDPN-205ENST00000487038 MAOAP21397 527 aa7.09□□□□□ -1.27
PDPN-205ENST00000487038 IMPA1P29218 277 aa7.09□□□□□ -1.27
PDPN-205ENST00000487038 FMO4P31512 558 aa7.09□□□□□ -1.27
PDPN-205ENST00000487038 FDFT1P37268 417 aa7.09□□□□□ -1.27
PDPN-205ENST00000487038 COILP38432 576 aaPredicted RBP7.09□□□□□ -1.27
PDPN-205ENST00000487038 NR0B1P51843 470 aaKnown RBP7.09□□□□□ -1.27
PDPN-205ENST00000487038 GDF10P55107 478 aa7.09□□□□□ -1.27
PDPN-205ENST00000487038 ADARP55265 1226 aaKnown RBP7.09□□□□□ -1.27
PDPN-205ENST00000487038 OLR1P78380 273 aa7.09□□□□□ -1.27
PDPN-205ENST00000487038 HYAL2Q12891 473 aa7.09□□□□□ -1.27
PDPN-205ENST00000487038 PWP1Q13610 501 aa7.09□□□□□ -1.27
PDPN-205ENST00000487038 KCNJ11Q14654 390 aa7.09□□□□□ -1.27
PDPN-205ENST00000487038 IQCB1Q15051 598 aa7.09□□□□□ -1.27
PDPN-205ENST00000487038 POU4F3Q15319 338 aa7.09□□□□□ -1.27
PDPN-205ENST00000487038 RPS6KA1Q15418 735 aa7.09□□□□□ -1.27
PDPN-205ENST00000487038 HYAL4Q2M3T9 481 aa7.09□□□□□ -1.27
PDPN-205ENST00000487038 DEFB134Q4QY38 66 aa7.09□□□□□ -1.27
PDPN-205ENST00000487038 ACSBG2Q5FVE4 666 aa7.09□□□□□ -1.27
PDPN-205ENST00000487038 PCID2Q5JVF3 399 aa7.09□□□□□ -1.27
PDPN-205ENST00000487038 PODNL1Q6PEZ8 512 aa7.09□□□□□ -1.27
PDPN-205ENST00000487038 YTHDF3Q7Z739 585 aaKnown RBP7.09□□□□□ -1.27
PDPN-205ENST00000487038 CXorf67Q86X51 503 aaPredicted RBP7.09□□□□□ -1.27
PDPN-205ENST00000487038 LACC1Q8IV20 430 aa7.09□□□□□ -1.27
PDPN-205ENST00000487038 LRRC56Q8IYG6 542 aaPredicted RBP7.09□□□□□ -1.27
PDPN-205ENST00000487038 ULK2Q8IYT8 1036 aa7.09□□□□□ -1.27
PDPN-205ENST00000487038 CIARTQ8N365 385 aaPredicted RBP7.09□□□□□ -1.27
PDPN-205ENST00000487038 VWA5B2Q8N398 1253 aa7.09□□□□□ -1.27
PDPN-205ENST00000487038 AFAP1L2Q8N4X5 818 aa7.09□□□□□ -1.27
PDPN-205ENST00000487038 MFSD9Q8NBP5 474 aa7.09□□□□□ -1.27
PDPN-205ENST00000487038 ZNF740Q8NDX6 193 aa7.09□□□□□ -1.27
PDPN-205ENST00000487038 TMEM158Q8WZ71 300 aa7.09□□□□□ -1.27
PDPN-205ENST00000487038 NCLNQ969V3 563 aa7.09□□□□□ -1.27
PDPN-205ENST00000487038 FAM136AQ96C01 138 aa7.09□□□□□ -1.27
PDPN-205ENST00000487038 CALR3Q96L12 384 aaKnown RBP7.09□□□□□ -1.27
PDPN-205ENST00000487038 BIRC8Q96P09 236 aa7.09□□□□□ -1.27
PDPN-205ENST00000487038 IFNKQ9P0W0 207 aa7.09□□□□□ -1.27
PDPN-205ENST00000487038 TRPS1Q9UHF7 1281 aa7.09□□□□□ -1.27
PDPN-205ENST00000487038 MMACHCQ9Y4U1 282 aa7.09□□□□□ -1.27
PDPN-205ENST00000487038 MPDZO75970 2070 aa7.08□□□□□ -1.28
PDPN-205ENST00000487038 RAI1Q7Z5J4 1906 aaPredicted RBP7.08□□□□□ -1.28
PDPN-205ENST00000487038 IGKV3D-11A0A0A0MRZ8 115 aa7.08□□□□□ -1.28
PDPN-205ENST00000487038 PABPN1LA6NDY0 278 aaKnown RBP7.08□□□□□ -1.28
PDPN-205ENST00000487038 EEF1E1-BLOC1S5C9J1V9 151 aa7.08□□□□□ -1.28
PDPN-205ENST00000487038 G3V3Y1 287 aa7.08□□□□□ -1.28
PDPN-205ENST00000487038 AP3B1O00203 1094 aa7.08□□□□□ -1.28
PDPN-205ENST00000487038 CASKO14936 926 aa7.08□□□□□ -1.28
PDPN-205ENST00000487038 EEF1E1O43324 174 aaKnown RBP7.08□□□□□ -1.28
PDPN-205ENST00000487038 DNAJB6O75190 326 aa7.08□□□□□ -1.28
PDPN-205ENST00000487038 CRLF1O75462 422 aa7.08□□□□□ -1.28
PDPN-205ENST00000487038 OR6B1O95007 311 aa7.08□□□□□ -1.28
PDPN-205ENST00000487038 HRGP04196 525 aa7.08□□□□□ -1.28
PDPN-205ENST00000487038 SERPIND1P05546 499 aa7.08□□□□□ -1.28
PDPN-205ENST00000487038 ZNF888P0CJ79 500 aaPredicted RBP7.08□□□□□ -1.28
PDPN-205ENST00000487038 OGNP20774 298 aaKnown RBP7.08□□□□□ -1.28
PDPN-205ENST00000487038 FPR1P21462 350 aa7.08□□□□□ -1.28
PDPN-205ENST00000487038 TIMP3P35625 211 aa7.08□□□□□ -1.28
PDPN-205ENST00000487038 SOX3P41225 446 aa7.08□□□□□ -1.28
PDPN-205ENST00000487038 SKIV2L2P42285 1042 aaKnown RBP7.08□□□□□ -1.28
PDPN-205ENST00000487038 BTG2P78543 158 aa7.08□□□□□ -1.28
PDPN-205ENST00000487038 TBL3Q12788 808 aaKnown RBP7.08□□□□□ -1.28
PDPN-205ENST00000487038 CBLBQ13191 982 aa7.08□□□□□ -1.28
PDPN-205ENST00000487038 SIX1Q15475 284 aaPredicted RBP7.08□□□□□ -1.28
PDPN-205ENST00000487038 KIAA0930Q6ICG6 404 aaPredicted RBP7.08□□□□□ -1.28
PDPN-205ENST00000487038 LRRC8EQ6NSJ5 796 aa7.08□□□□□ -1.28
PDPN-205ENST00000487038 OPN5Q6U736 354 aa7.08□□□□□ -1.28
PDPN-205ENST00000487038 LCTLQ6UWM7 567 aa7.08□□□□□ -1.28
PDPN-205ENST00000487038 UBE2R2Q712K3 238 aaPredicted RBP7.08□□□□□ -1.28
PDPN-205ENST00000487038 REXO1L1PQ8IX06 675 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms