RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 CENPUQ71F23 418 aa10.09□□□□□ -0.79
SMARCC1-205ENST00000483847 PIWIL4Q7Z3Z4 852 aaKnown RBP10.09□□□□□ -0.79
SMARCC1-205ENST00000483847 SDCCAG8Q86SQ7 713 aaPredicted RBP10.09□□□□□ -0.79
SMARCC1-205ENST00000483847 CTAGE6Q86UF2 777 aa10.09□□□□□ -0.79
SMARCC1-205ENST00000483847 SLC22A16Q86VW1 577 aa10.09□□□□□ -0.79
SMARCC1-205ENST00000483847 VWA5B2Q8N398 1253 aa10.09□□□□□ -0.79
SMARCC1-205ENST00000483847 NAXEQ8NCW5 288 aa10.09□□□□□ -0.79
SMARCC1-205ENST00000483847 ALKBH8Q96BT7 664 aaKnown RBP10.09□□□□□ -0.79
SMARCC1-205ENST00000483847 PANX2Q96RD6 677 aa10.09□□□□□ -0.79
SMARCC1-205ENST00000483847 RHBGQ9H310 441 aa10.09□□□□□ -0.79
SMARCC1-205ENST00000483847 NEUROD4Q9HD90 331 aa10.09□□□□□ -0.79
SMARCC1-205ENST00000483847 PRDM9Q9NQV7 894 aa10.09□□□□□ -0.79
SMARCC1-205ENST00000483847 ZFATQ9P243 1243 aa10.09□□□□□ -0.79
SMARCC1-205ENST00000483847 SPRR3Q9UBC9 169 aa10.09□□□□□ -0.79
SMARCC1-205ENST00000483847 ADAM21Q9UKJ8 722 aa10.09□□□□□ -0.79
SMARCC1-205ENST00000483847 ACAD8Q9UKU7 415 aa10.09□□□□□ -0.79
SMARCC1-205ENST00000483847 ATP6AP2A0A1C7CYW4 349 aa10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 A8MVJ9 347 aa10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 AKR1B15C9JRZ8 316 aaPredicted RBP10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 TGFBR3LH3BV60 316 aa10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 CBFA2T2O43439 604 aa10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 LIASO43766 372 aa10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 ZBTB14O43829 449 aa10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 ATP6AP2O75787 350 aa10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 SERPIND1P05546 499 aa10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 ZSCAN5DPP0CG00 497 aa10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 MPC1LP0DKB6 136 aa10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 CD53P19397 219 aa10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 ENDOUP21128 410 aaKnown RBP10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 STIP1P31948 543 aaKnown RBP10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 SOX3P41225 446 aa10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 GPR143P51810 404 aa10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 NAP1L1P55209 391 aaKnown RBP10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 WNT3P56703 355 aa10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 RAB8AP61006 207 aa10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 DCAF7P61962 342 aa10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 TBX2Q13207 712 aaPredicted RBP10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 ZNF750Q32MQ0 723 aa10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 RIPPLY2Q5TAB7 128 aa10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 FBXW10Q5XX13 1052 aa10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 ZNF549Q6P9A3 640 aa10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 RGS9BPQ6ZS82 235 aa10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 UBE2R2Q712K3 238 aaPredicted RBP10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 C17orf64Q86WR6 236 aa10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 CNGA4Q8IV77 575 aa10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 FAM109AQ8N4B1 249 aa10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 RNASE6Q93091 150 aaKnown RBP10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 NCLNQ969V3 563 aa10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 PDLIM2Q96JY6 352 aa10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 COX4I2Q96KJ9 171 aa10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 TCF12Q99081 682 aa10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 FAM129AQ9BZQ8 928 aa10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 IL22Q9GZX6 179 aa10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 SEMA4BQ9NPR2 832 aaPredicted RBP10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 HPF1Q9NWY4 346 aa10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 SYBUQ9NX95 663 aa10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 B4GALT7Q9UBV7 327 aa10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 ADAMTS6Q9UKP5 1117 aa10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 YARS2Q9Y2Z4 477 aaKnown RBP10.08□□□□□ -0.8
SMARCC1-205ENST00000483847 A0A1W2PPR1 153 aa10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 KDM4EB2RXH2 506 aaPredicted RBP10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 C4orf51C9J302 202 aa10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 OR1F1O43749 312 aa10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 ZNF354AO60765 605 aaPredicted RBP10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 NPPBP16860 134 aa10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 BMP5P22003 454 aa10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 MGAT1P26572 445 aa10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 GRK3P35626 688 aa10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 PEX19P40855 299 aa10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 HNF4AP41235 474 aa10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 DNASE1L1P49184 302 aa10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 MAN2A2P49641 1150 aa10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 ASCL1P50553 236 aa10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 FOXO1Q12778 655 aa10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 NAE1Q13564 534 aa10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 PWP1Q13610 501 aa10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 PCBP2Q15366 365 aaKnown RBP eCLIP10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 SPA17Q15506 151 aa10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 KCTD19Q17RG1 926 aaPredicted RBP10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 TTLL9Q3SXZ7 439 aa10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 WLSQ5T9L3 541 aa10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 NDUFAF5Q5TEU4 345 aa10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 POMZP3Q6PJE2 187 aa10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 AGTRAPQ6RW13 159 aa10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 CPNE9Q8IYJ1 553 aa10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 TC2NQ8N9U0 490 aa10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 UTP15Q8TED0 518 aaKnown RBP10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 ASB15Q8WXK1 588 aa10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 VMP1Q96GC9 406 aa10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 RASL10BQ96S79 203 aa10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 FAM173AQ9BQD7 235 aa10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 SARGQ9BW04 601 aa10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 KIFC1Q9BW19 673 aa10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 SGPP1Q9BX95 441 aa10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 LACRTQ9GZZ8 138 aa10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 PCBD2Q9H0N5 130 aa10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 SPNS1Q9H2V7 528 aa10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 IL1RL2Q9HB29 575 aa10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 PNO1Q9NRX1 252 aaKnown RBP10.07□□□□□ -0.8
SMARCC1-205ENST00000483847 TUBA8Q9NY65 449 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms