RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 RDH11Q8TC12 318 aa16.65■□□□□ 0.26
PTPN7-209ENST00000477554 THOC3Q96J01 351 aaKnown RBP16.65■□□□□ 0.26
PTPN7-209ENST00000477554 IP6K3Q96PC2 410 aa16.65■□□□□ 0.26
PTPN7-209ENST00000477554 CD244Q9BZW8 370 aa16.65■□□□□ 0.26
PTPN7-209ENST00000477554 ATP13A2Q9NQ11 1180 aa16.65■□□□□ 0.26
PTPN7-209ENST00000477554 SLC17A7Q9P2U7 560 aa16.65■□□□□ 0.26
PTPN7-209ENST00000477554 XPR1Q9UBH6 696 aa16.65■□□□□ 0.26
PTPN7-209ENST00000477554 ANAPC2Q9UJX6 822 aa16.65■□□□□ 0.26
PTPN7-209ENST00000477554 EMCNQ9ULC0 261 aa16.65■□□□□ 0.26
PTPN7-209ENST00000477554 SLC22A7Q9Y694 548 aa16.65■□□□□ 0.26
PTPN7-209ENST00000477554 CHST10O43529 356 aa16.64■□□□□ 0.25
PTPN7-209ENST00000477554 SH3BGRLO75368 114 aa16.64■□□□□ 0.25
PTPN7-209ENST00000477554 SIX3O95343 332 aaPredicted RBP16.64■□□□□ 0.25
PTPN7-209ENST00000477554 ALOX12P18054 663 aa16.64■□□□□ 0.25
PTPN7-209ENST00000477554 TAC1P20366 129 aa16.64■□□□□ 0.25
PTPN7-209ENST00000477554 AHRP35869 848 aa16.64■□□□□ 0.25
PTPN7-209ENST00000477554 SOX8P57073 446 aa16.64■□□□□ 0.25
PTPN7-209ENST00000477554 AIMP2Q13155 320 aaKnown RBP16.64■□□□□ 0.25
PTPN7-209ENST00000477554 MPP2Q14168 576 aa16.64■□□□□ 0.25
PTPN7-209ENST00000477554 PDK4Q16654 411 aa16.64■□□□□ 0.25
PTPN7-209ENST00000477554 PLEKHN1Q494U1 663 aaPredicted RBP16.64■□□□□ 0.25
PTPN7-209ENST00000477554 VWA5B1Q5TIE3 1220 aa16.64■□□□□ 0.25
PTPN7-209ENST00000477554 SLC6A19Q695T7 634 aa16.64■□□□□ 0.25
PTPN7-209ENST00000477554 JMJD6Q6NYC1 403 aaPredicted RBP16.64■□□□□ 0.25
PTPN7-209ENST00000477554 RPS27LQ71UM5 84 aaKnown RBP16.64■□□□□ 0.25
PTPN7-209ENST00000477554 ARMC2Q8NEN0 867 aa16.64■□□□□ 0.25
PTPN7-209ENST00000477554 PSMF1Q92530 271 aa16.64■□□□□ 0.25
PTPN7-209ENST00000477554 C14orf105Q9NVL8 296 aa16.64■□□□□ 0.25
PTPN7-209ENST00000477554 NUDT4Q9NZJ9 180 aa16.64■□□□□ 0.25
PTPN7-209ENST00000477554 TMCO1Q9UM00 188 aa16.64■□□□□ 0.25
PTPN7-209ENST00000477554 SHANK1Q9Y566 2161 aa16.64■□□□□ 0.25
PTPN7-209ENST00000477554 SMIM24O75264 130 aa16.63■□□□□ 0.25
PTPN7-209ENST00000477554 SEC24DO94855 1032 aaPredicted RBP16.63■□□□□ 0.25
PTPN7-209ENST00000477554 SORBS2O94875 1100 aaKnown RBP16.63■□□□□ 0.25
PTPN7-209ENST00000477554 ETV4P43268 484 aa16.63■□□□□ 0.25
PTPN7-209ENST00000477554 BTG2P78543 158 aa16.63■□□□□ 0.25
PTPN7-209ENST00000477554 RHAGQ02094 409 aa16.63■□□□□ 0.25
PTPN7-209ENST00000477554 CHIT1Q13231 466 aa16.63■□□□□ 0.25
PTPN7-209ENST00000477554 XKR6Q5GH73 641 aa16.63■□□□□ 0.25
PTPN7-209ENST00000477554 HHATQ5VTY9 493 aa16.63■□□□□ 0.25
PTPN7-209ENST00000477554 B3GNTL1Q67FW5 361 aaPredicted RBP16.63■□□□□ 0.25
PTPN7-209ENST00000477554 TMIGD1Q6UXZ0 262 aa16.63■□□□□ 0.25
PTPN7-209ENST00000477554 UBTD2Q8WUN7 234 aa16.63■□□□□ 0.25
PTPN7-209ENST00000477554 CCT6BQ92526 530 aa16.63■□□□□ 0.25
PTPN7-209ENST00000477554 C19orf60Q96EN9 201 aa16.63■□□□□ 0.25
PTPN7-209ENST00000477554 WDR77Q9BQA1 342 aaPredicted RBP16.63■□□□□ 0.25
PTPN7-209ENST00000477554 C12orf65Q9H3J6 166 aaKnown RBP16.63■□□□□ 0.25
PTPN7-209ENST00000477554 CPSF2Q9P2I0 782 aaKnown RBP16.63■□□□□ 0.25
PTPN7-209ENST00000477554 ZNF451Q9Y4E5 1061 aa16.63■□□□□ 0.25
PTPN7-209ENST00000477554 MYO18BQ8IUG5 2567 aa16.63■□□□□ 0.25
PTPN7-209ENST00000477554 LOC102723996A0A087X1L8 192 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 HPP00738 406 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 F10P00742 488 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 SBK3P0C264 359 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 PRR35P0CG20 571 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 MYL2P10916 166 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 ITGAMP11215 1152 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 CPA3P15088 417 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 HNRNPFP52597 415 aaKnown RBP16.62■□□□□ 0.25
PTPN7-209ENST00000477554 RGS1Q08116 209 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 RUNX2Q13950 521 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 PFKFB4Q16877 469 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 CDKL4Q5MAI5 379 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 ANKRD37Q7Z713 158 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 TCAIMQ8N3R3 496 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 TMEM151AQ8N4L1 468 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 SIRT6Q8N6T7 355 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 TMEM52Q8NDY8 209 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 BRIX1Q8TDN6 353 aaKnown RBP16.62■□□□□ 0.25
PTPN7-209ENST00000477554 SREK1Q8WXA9 508 aaKnown RBP16.62■□□□□ 0.25
PTPN7-209ENST00000477554 MS4A6EQ96DS6 147 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 CCDC126Q96EE4 140 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 RHBGQ9H310 441 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 INTS9Q9NV88 658 aaKnown RBP16.62■□□□□ 0.25
PTPN7-209ENST00000477554 GPRC5BQ9NZH0 403 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 COPG2Q9UBF2 871 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 FLNCQ14315 2725 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 NSG1A0A0A6YYJ2 146 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 A0A1W2PQ72 361 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 LRIT2A6NDA9 550 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 CLGNO14967 610 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 B4GALT2O60909 372 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 WFS1O76024 890 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 IPO13O94829 963 aaKnown RBP16.62■□□□□ 0.25
PTPN7-209ENST00000477554 WISP1O95388 367 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 IGHEP01854 428 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 S100BP04271 92 aaPredicted RBP16.62■□□□□ 0.25
PTPN7-209ENST00000477554 SERPINA6P08185 405 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 C8orf89P0DMQ9 161 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 CHN1P15882 459 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 BTN3A2P78410 334 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 FOXK1P85037 733 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 HERC3Q15034 1050 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 LINC00696Q6ZRV3 163 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 NDUFAF7Q7L592 441 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 UBE3DQ7Z6J8 389 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 SLC22A9Q8IVM8 553 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 CA13Q8N1Q1 262 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 TEX9Q8N6V9 391 aa16.62■□□□□ 0.25
PTPN7-209ENST00000477554 CATSPER1Q8NEC5 780 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms