RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 ESR1P03372 595 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 ACAA1P09110 424 aaPredicted RBP3.93□□□□□ -1.78
USP16-205ENST00000474835 CR2P20023 1033 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 CA8P35219 290 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 IGBP1P78318 339 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 HTRA3P83110 453 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 CDK5Q00535 292 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 KLHL22Q53GT1 634 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 CRB2Q5IJ48 1285 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 RSBN1Q5VWQ0 802 aaPredicted RBP3.93□□□□□ -1.78
USP16-205ENST00000474835 OLFML2AQ68BL7 652 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 ABLIM2Q6H8Q1 611 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 ARSKQ6UWY0 536 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 FAM26EQ8N5C1 309 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 AMER2Q8N7J2 671 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 POGLUT1Q8NBL1 392 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 PROKR2Q8NFJ6 384 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 NSUN6Q8TEA1 469 aaKnown RBP3.93□□□□□ -1.78
USP16-205ENST00000474835 SEPT1Q8WYJ6 367 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 ZNF354BQ96LW1 612 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 CASD1Q96PB1 797 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 WRAP53Q9BUR4 548 aaKnown RBP3.93□□□□□ -1.78
USP16-205ENST00000474835 HIPK2Q9H2X6 1198 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 TASP1Q9H6P5 420 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 ABCB10Q9NRK6 738 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 IARS2Q9NSE4 1012 aaKnown RBP3.93□□□□□ -1.78
USP16-205ENST00000474835 ABCB8Q9NUT2 735 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 TXNL4BQ9NX01 149 aaKnown RBP3.93□□□□□ -1.78
USP16-205ENST00000474835 ELOVL2Q9NXB9 296 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 MARCH4Q9P2E8 410 aaPredicted RBP3.93□□□□□ -1.78
USP16-205ENST00000474835 AASSQ9UDR5 926 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 SEC14L4Q9UDX3 406 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 RHBDD3Q9Y3P4 386 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 SCN2AQ99250 2005 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 A0A1W2PPC1 479 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 A8MX80 341 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 KDM4EB2RXH2 506 aaPredicted RBP3.93□□□□□ -1.78
USP16-205ENST00000474835 F8W036 122 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 MATN3O15232 486 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 NOS1APO75052 506 aaPredicted RBP3.93□□□□□ -1.78
USP16-205ENST00000474835 TMEM127O75204 238 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 SIX3O95343 332 aaPredicted RBP3.93□□□□□ -1.78
USP16-205ENST00000474835 IGSF6O95976 241 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 LALBAP00709 142 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 STMN1P16949 149 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 CXCL3P19876 107 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 IGFBP5P24593 272 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 ITGB8P26012 769 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 PCGF2P35227 344 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 PTGS2P35354 604 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 MTNR1BP49286 362 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 CLK1P49759 484 aaKnown RBP3.93□□□□□ -1.78
USP16-205ENST00000474835 CLCN4P51793 760 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 ABHD18Q0P651 414 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 CAMK2GQ13555 558 aaPredicted RBP3.93□□□□□ -1.78
USP16-205ENST00000474835 PTPRCAPQ14761 206 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 TRIP4Q15650 581 aaPredicted RBP3.93□□□□□ -1.78
USP16-205ENST00000474835 HECTD3Q5T447 861 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 B3GNT7Q8NFL0 401 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 NUDT8Q8WV74 236 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 TFGQ92734 400 aaPredicted RBP3.93□□□□□ -1.78
USP16-205ENST00000474835 ZC3H10Q96K80 434 aaKnown RBP3.93□□□□□ -1.78
USP16-205ENST00000474835 PPP1R2P1Q96PQ5 205 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 TMEM38AQ9H6F2 299 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 RDH14Q9HBH5 336 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 ACER3Q9NUN7 267 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 KCTD5Q9NXV2 234 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 GDE1Q9NZC3 331 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 NDRG3Q9UGV2 375 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 ATPIF1Q9UII2 106 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 TNRC6BQ9UPQ9 1833 aaKnown RBP3.93□□□□□ -1.78
USP16-205ENST00000474835 TRDV1A0A1B0GX56 115 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 A0A1W2PQ72 361 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 YDJCA8MPS7 323 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 INPP4BO15327 924 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 PRAMEF4O60810 478 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 PDE9AO76083 593 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 AQP8O94778 261 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 C22orf31O95567 290 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 EPPINO95925 133 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 VTNP04004 478 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 CYP17A1P05093 508 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 LYL1P12980 280 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 KCNE1P15382 129 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 FOSL1P15407 271 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 HLA-GP17693 338 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 CD53P19397 219 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 CDKN2CP42773 168 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 OLR1P78380 273 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 RAE1P78406 368 aaKnown RBP3.92□□□□□ -1.78
USP16-205ENST00000474835 SYT16Q17RD7 645 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 PLK5Q496M5 336 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 MARCH8Q5T0T0 291 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 CACHD1Q5VU97 1274 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 PRAMEF9Q5VWM5 478 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 HEATR6Q6AI08 1181 aaKnown RBP3.92□□□□□ -1.78
USP16-205ENST00000474835 CES3Q6UWW8 571 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 PAMR1Q6UXH9 720 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 GSG1LQ6UXU4 331 aa3.92□□□□□ -1.78
USP16-205ENST00000474835 SHFQ7M4L6 423 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms