RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 KLHL31Q9H511 634 aa12.19□□□□□ -0.46
PTPN7-207ENST00000468385 CLK4Q9HAZ1 481 aaKnown RBP12.19□□□□□ -0.46
PTPN7-207ENST00000468385 XAB2Q9HCS7 855 aaKnown RBP12.19□□□□□ -0.46
PTPN7-207ENST00000468385 HOMER3Q9NSC5 361 aa12.19□□□□□ -0.46
PTPN7-207ENST00000468385 DEPPQ9NTK1 212 aa12.19□□□□□ -0.46
PTPN7-207ENST00000468385 FBXW2Q9UKT8 454 aa12.19□□□□□ -0.46
PTPN7-207ENST00000468385 PINLYPA6NC86 204 aa12.18□□□□□ -0.46
PTPN7-207ENST00000468385 KLK8O60259 260 aa12.18□□□□□ -0.46
PTPN7-207ENST00000468385 PRKNO60260 465 aaPredicted RBP12.18□□□□□ -0.46
PTPN7-207ENST00000468385 MYO1DO94832 1006 aa12.18□□□□□ -0.46
PTPN7-207ENST00000468385 NADKO95544 446 aaPredicted RBP12.18□□□□□ -0.46
PTPN7-207ENST00000468385 RNH1P13489 461 aaKnown RBP12.18□□□□□ -0.46
PTPN7-207ENST00000468385 CD99P14209 185 aa12.18□□□□□ -0.46
PTPN7-207ENST00000468385 AHRP35869 848 aa12.18□□□□□ -0.46
PTPN7-207ENST00000468385 HNF4AP41235 474 aa12.18□□□□□ -0.46
PTPN7-207ENST00000468385 GPR143P51810 404 aa12.18□□□□□ -0.46
PTPN7-207ENST00000468385 IST1P53990 364 aa12.18□□□□□ -0.46
PTPN7-207ENST00000468385 CDKN2DP55273 166 aa12.18□□□□□ -0.46
PTPN7-207ENST00000468385 REEP5Q00765 189 aa12.18□□□□□ -0.46
PTPN7-207ENST00000468385 TERF2Q15554 542 aa12.18□□□□□ -0.46
PTPN7-207ENST00000468385 RBM20Q5T481 1227 aaKnown RBP12.18□□□□□ -0.46
PTPN7-207ENST00000468385 CES4AQ5XG92 561 aa12.18□□□□□ -0.46
PTPN7-207ENST00000468385 TTC27Q6P3X3 843 aa12.18□□□□□ -0.46
PTPN7-207ENST00000468385 ANKRD53Q8N9V6 530 aa12.18□□□□□ -0.46
PTPN7-207ENST00000468385 NEIL2Q969S2 332 aa12.18□□□□□ -0.46
PTPN7-207ENST00000468385 PDLIM2Q96JY6 352 aa12.18□□□□□ -0.46
PTPN7-207ENST00000468385 FAM167BQ9BTA0 163 aa12.18□□□□□ -0.46
PTPN7-207ENST00000468385 DEFB127Q9H1M4 99 aa12.18□□□□□ -0.46
PTPN7-207ENST00000468385 RHBGQ9H310 441 aa12.18□□□□□ -0.46
PTPN7-207ENST00000468385 TIMMDC1Q9NPL8 285 aa12.18□□□□□ -0.46
PTPN7-207ENST00000468385 ARL15Q9NXU5 204 aa12.18□□□□□ -0.46
PTPN7-207ENST00000468385 TAS2R13Q9NYV9 303 aa12.18□□□□□ -0.46
PTPN7-207ENST00000468385 PPIEQ9UNP9 301 aaKnown RBP12.18□□□□□ -0.46
PTPN7-207ENST00000468385 CLDN16Q9Y5I7 305 aa12.18□□□□□ -0.46
PTPN7-207ENST00000468385 MAD1L1Q9Y6D9 718 aa12.18□□□□□ -0.46
PTPN7-207ENST00000468385 INTS1Q8N201 2190 aaKnown RBP12.18□□□□□ -0.46
PTPN7-207ENST00000468385 TMEM200CA6NKL6 621 aa12.17□□□□□ -0.46
PTPN7-207ENST00000468385 TGFBR3LH3BV60 316 aa12.17□□□□□ -0.46
PTPN7-207ENST00000468385 PSMD12O00232 456 aaPredicted RBP12.17□□□□□ -0.46
PTPN7-207ENST00000468385 HOXB4P17483 251 aaPredicted RBP12.17□□□□□ -0.46
PTPN7-207ENST00000468385 CXCR5P32302 372 aa12.17□□□□□ -0.46
PTPN7-207ENST00000468385 DEKP35659 375 aaKnown RBP12.17□□□□□ -0.46
PTPN7-207ENST00000468385 SSR4P51571 173 aa12.17□□□□□ -0.46
PTPN7-207ENST00000468385 AP1S2P56377 157 aa12.17□□□□□ -0.46
PTPN7-207ENST00000468385 CSHL1Q14406 222 aa12.17□□□□□ -0.46
PTPN7-207ENST00000468385 GXYLT1Q4G148 440 aa12.17□□□□□ -0.46
PTPN7-207ENST00000468385 C16orf47Q6ZP98 133 aaPredicted RBP12.17□□□□□ -0.46
PTPN7-207ENST00000468385 ACAD11Q709F0 780 aa12.17□□□□□ -0.46
PTPN7-207ENST00000468385 SCUBE1Q8IWY4 988 aa12.17□□□□□ -0.46
PTPN7-207ENST00000468385 TBC1D19Q8N5T2 526 aa12.17□□□□□ -0.46
PTPN7-207ENST00000468385 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.17□□□□□ -0.46
PTPN7-207ENST00000468385 PSD4Q8NDX1 1056 aa12.17□□□□□ -0.46
PTPN7-207ENST00000468385 ARMC2Q8NEN0 867 aa12.17□□□□□ -0.46
PTPN7-207ENST00000468385 NCLNQ969V3 563 aa12.17□□□□□ -0.46
PTPN7-207ENST00000468385 FBXL8Q96CD0 374 aa12.17□□□□□ -0.46
PTPN7-207ENST00000468385 VMP1Q96GC9 406 aa12.17□□□□□ -0.46
PTPN7-207ENST00000468385 TSNARE1Q96NA8 513 aa12.17□□□□□ -0.46
PTPN7-207ENST00000468385 CXXC4Q9H2H0 198 aa12.17□□□□□ -0.46
PTPN7-207ENST00000468385 ZDHHC11Q9H8X9 412 aa12.17□□□□□ -0.46
PTPN7-207ENST00000468385 PNPLA3Q9NST1 481 aa12.17□□□□□ -0.46
PTPN7-207ENST00000468385 KCMF1Q9P0J7 381 aa12.17□□□□□ -0.46
PTPN7-207ENST00000468385 MMACHCQ9Y4U1 282 aa12.17□□□□□ -0.46
PTPN7-207ENST00000468385 SPG11Q96JI7 2443 aa12.17□□□□□ -0.46
PTPN7-207ENST00000468385 FAM221AA4D161 298 aa12.16□□□□□ -0.46
PTPN7-207ENST00000468385 URADA6NGE7 173 aa12.16□□□□□ -0.46
PTPN7-207ENST00000468385 FAM166BA8MTA8 275 aa12.16□□□□□ -0.46
PTPN7-207ENST00000468385 NPIPA2E9PIF3 369 aa12.16□□□□□ -0.46
PTPN7-207ENST00000468385 NPIPA3F8WFD2 350 aa12.16□□□□□ -0.46
PTPN7-207ENST00000468385 AHSGP02765 367 aa12.16□□□□□ -0.46
PTPN7-207ENST00000468385 TUBB4AP04350 444 aa12.16□□□□□ -0.46
PTPN7-207ENST00000468385 PPP2R1BP30154 601 aa12.16□□□□□ -0.46
PTPN7-207ENST00000468385 PGGT1BP53609 377 aa12.16□□□□□ -0.46
PTPN7-207ENST00000468385 PPIAP62937 165 aaKnown RBP12.16□□□□□ -0.46
PTPN7-207ENST00000468385 MYBPHQ13203 477 aa12.16□□□□□ -0.46
PTPN7-207ENST00000468385 XKR6Q5GH73 641 aa12.16□□□□□ -0.46
PTPN7-207ENST00000468385 PAOXQ6QHF9 649 aa12.16□□□□□ -0.46
PTPN7-207ENST00000468385 NAT8LQ8N9F0 302 aa12.16□□□□□ -0.46
PTPN7-207ENST00000468385 SPC24Q8NBT2 197 aa12.16□□□□□ -0.46
PTPN7-207ENST00000468385 TRPV3Q8NET8 790 aa12.16□□□□□ -0.46
PTPN7-207ENST00000468385 OR2M7Q8NG81 312 aa12.16□□□□□ -0.46
PTPN7-207ENST00000468385 OR5M3Q8NGP4 307 aa12.16□□□□□ -0.46
PTPN7-207ENST00000468385 CREB3L4Q8TEY5 395 aa12.16□□□□□ -0.46
PTPN7-207ENST00000468385 FOXC2Q99958 501 aa12.16□□□□□ -0.46
PTPN7-207ENST00000468385 LIN28AQ9H9Z2 209 aaKnown RBP12.16□□□□□ -0.46
PTPN7-207ENST00000468385 PELI2Q9HAT8 420 aa12.16□□□□□ -0.46
PTPN7-207ENST00000468385 PNO1Q9NRX1 252 aaKnown RBP12.16□□□□□ -0.46
PTPN7-207ENST00000468385 IKZF3Q9UKT9 509 aa12.16□□□□□ -0.46
PTPN7-207ENST00000468385 YARS2Q9Y2Z4 477 aaKnown RBP12.16□□□□□ -0.46
PTPN7-207ENST00000468385 LIPGQ9Y5X9 500 aa12.16□□□□□ -0.46
PTPN7-207ENST00000468385 PHF3Q92576 2039 aaKnown RBP12.16□□□□□ -0.46
PTPN7-207ENST00000468385 ITPR3Q14573 2671 aa12.15□□□□□ -0.46
PTPN7-207ENST00000468385 A0A0G2JMM0 328 aa12.15□□□□□ -0.46
PTPN7-207ENST00000468385 A0A1W2PPB8 328 aa12.15□□□□□ -0.46
PTPN7-207ENST00000468385 A0A1W2PRS3 328 aa12.15□□□□□ -0.46
PTPN7-207ENST00000468385 A8MVJ9 347 aa12.15□□□□□ -0.46
PTPN7-207ENST00000468385 KIR3DP1A8MWS1 328 aa12.15□□□□□ -0.46
PTPN7-207ENST00000468385 OR2J2O76002 312 aa12.15□□□□□ -0.46
PTPN7-207ENST00000468385 ZFAND5O76080 213 aa12.15□□□□□ -0.46
PTPN7-207ENST00000468385 GLSO94925 669 aaPredicted RBP12.15□□□□□ -0.46
PTPN7-207ENST00000468385 OR6B1O95007 311 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms