RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 NOP16Q9Y3C1 178 aaKnown RBP8.42□□□□□ -1.06
HPS4-209ENST00000466781 PCDHGA10Q9Y5H3 936 aa8.42□□□□□ -1.06
HPS4-209ENST00000466781 TTLL8A6PVC2 850 aa8.42□□□□□ -1.06
HPS4-209ENST00000466781 OPN1SWP03999 348 aa8.42□□□□□ -1.06
HPS4-209ENST00000466781 EPCAMP16422 314 aa8.42□□□□□ -1.06
HPS4-209ENST00000466781 TAS2R39P59534 338 aa8.42□□□□□ -1.06
HPS4-209ENST00000466781 HMGCS1Q01581 520 aa8.42□□□□□ -1.06
HPS4-209ENST00000466781 SGCAQ16586 387 aa8.42□□□□□ -1.06
HPS4-209ENST00000466781 FAM214AQ32MH5 1076 aa8.42□□□□□ -1.06
HPS4-209ENST00000466781 NKAPLQ5M9Q1 402 aa8.42□□□□□ -1.06
HPS4-209ENST00000466781 NRROSQ86YC3 692 aa8.42□□□□□ -1.06
HPS4-209ENST00000466781 ARHGAP12Q8IWW6 846 aa8.42□□□□□ -1.06
HPS4-209ENST00000466781 CMTM8Q8IZV2 173 aa8.42□□□□□ -1.06
HPS4-209ENST00000466781 TRMT10AQ8TBZ6 339 aaKnown RBP8.42□□□□□ -1.06
HPS4-209ENST00000466781 ELP5Q8TE02 316 aa8.42□□□□□ -1.06
HPS4-209ENST00000466781 THRSPQ92748 146 aa8.42□□□□□ -1.06
HPS4-209ENST00000466781 ZC3H10Q96K80 434 aaKnown RBP8.42□□□□□ -1.06
HPS4-209ENST00000466781 GATA5Q9BWX5 397 aaPredicted RBP8.42□□□□□ -1.06
HPS4-209ENST00000466781 IL21RQ9HBE5 538 aa8.42□□□□□ -1.06
HPS4-209ENST00000466781 TAS2R9Q9NYW1 312 aa8.42□□□□□ -1.06
HPS4-209ENST00000466781 REXO2Q9Y3B8 237 aaKnown RBP8.42□□□□□ -1.06
HPS4-209ENST00000466781 ACOX3O15254 700 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 KCNJ13O60928 360 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 ARL6IP5O75915 188 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 SPARCP09486 303 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 CRISP1P54107 249 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 TAS2R43P59537 309 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 FLYWCH1Q4VC44 716 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 RBM20Q5T481 1227 aaKnown RBP8.41□□□□□ -1.06
HPS4-209ENST00000466781 CST9Q5W186 159 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 SLC36A4Q6YBV0 504 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 ASB18Q6ZVZ8 466 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 TGM7Q96PF1 710 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 OR1F2PQ96R84 312 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 RBCK1Q9BYM8 510 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 DEFB126Q9BYW3 111 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 DPAGT1Q9H3H5 408 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 C12orf65Q9H3J6 166 aaKnown RBP8.41□□□□□ -1.06
HPS4-209ENST00000466781 EHD1Q9H4M9 534 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 MRM3Q9HC36 420 aaKnown RBP8.41□□□□□ -1.06
HPS4-209ENST00000466781 MLXQ9UH92 298 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 CD207Q9UJ71 328 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 TIMM8BQ9Y5J9 83 aaPredicted RBP8.41□□□□□ -1.06
HPS4-209ENST00000466781 HS3ST4Q9Y661 456 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 A6NLC8 198 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 FOXO6A8MYZ6 492 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 FTCDNL1E5RQL4 147 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 SMAD9O15198 467 aaKnown RBP8.41□□□□□ -1.06
HPS4-209ENST00000466781 CFHP08603 1231 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 BMPR1AP36894 532 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 ACVRL1P37023 503 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 RGS19P49795 217 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 EEFSECP57772 596 aaKnown RBP8.41□□□□□ -1.06
HPS4-209ENST00000466781 RAET1LQ5VY80 246 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 EIF5AL1Q6IS14 154 aaKnown RBP8.41□□□□□ -1.06
HPS4-209ENST00000466781 ALDH16A1Q8IZ83 802 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 C7orf57Q8NEG2 295 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 PCDH19Q8TAB3 1148 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 SCGB1C1Q8TD33 95 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 RADILQ96JH8 1075 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 OR2M4Q96R27 311 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 CDCA3Q99618 268 aaPredicted RBP8.41□□□□□ -1.06
HPS4-209ENST00000466781 TREM1Q9NP99 234 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 ZNF226Q9NYT6 803 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 MANBAO00462 879 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 CH25HO95992 272 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 MT-ND5P03915 603 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 FUT4P22083 530 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 VAMP1P23763 118 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 CDK6Q00534 326 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 KCNC3Q14003 757 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 RAB12Q6IQ22 244 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 TIGD4Q8IY51 512 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 GALNT11Q8NCW6 608 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 MS4A4AQ96JQ5 239 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 ACSL5Q9ULC5 683 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 KCNIP3Q9Y2W7 256 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 TELO2Q9Y4R8 837 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 NRAPQ86VF7 1730 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 H2BFMP0C1H6 154 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 HSD3B1P14060 373 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 OR4D2P58180 307 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 ID2Q02363 134 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 GBX1Q14549 363 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 RHEBQ15382 184 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 QPCTQ16769 361 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 WSCD2Q2TBF2 565 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 DUS1LQ6P1R4 473 aaKnown RBP8.41□□□□□ -1.06
HPS4-209ENST00000466781 TMIGD1Q6UXZ0 262 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 IRF2BP1Q8IU81 584 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 AQP11Q8NBQ7 271 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 MAGEE1Q9HCI5 957 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.41□□□□□ -1.06
HPS4-209ENST00000466781 MTMR11A4FU01 709 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 PLD2O14939 933 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 VILLO15195 856 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 PEPDP12955 493 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 IFNGR1P15260 489 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 PLCXD2Q0VAA5 305 aa8.41□□□□□ -1.06
HPS4-209ENST00000466781 CHRFAM7AQ494W8 412 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms