RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 TSGA10Q9BZW7 698 aa10.96□□□□□ -0.65
CNOT4-208ENST00000465721 DEFB127Q9H1M4 99 aa10.96□□□□□ -0.65
CNOT4-208ENST00000465721 CCDC68Q9H2F9 335 aa10.96□□□□□ -0.65
CNOT4-208ENST00000465721 PRDM9Q9NQV7 894 aa10.96□□□□□ -0.65
CNOT4-208ENST00000465721 PPIEQ9UNP9 301 aaKnown RBP10.96□□□□□ -0.65
CNOT4-208ENST00000465721 RPH3AQ9Y2J0 694 aaPredicted RBP10.96□□□□□ -0.65
CNOT4-208ENST00000465721 COL6A5A8TX70 2615 aa10.95□□□□□ -0.66
CNOT4-208ENST00000465721 TMEM200CA6NKL6 621 aa10.95□□□□□ -0.66
CNOT4-208ENST00000465721 FAM166BA8MTA8 275 aa10.95□□□□□ -0.66
CNOT4-208ENST00000465721 NPIPA2E9PIF3 369 aa10.95□□□□□ -0.66
CNOT4-208ENST00000465721 NPIPA3F8WFD2 350 aa10.95□□□□□ -0.66
CNOT4-208ENST00000465721 OR1F1O43749 312 aa10.95□□□□□ -0.66
CNOT4-208ENST00000465721 PRKNO60260 465 aaPredicted RBP10.95□□□□□ -0.66
CNOT4-208ENST00000465721 MYO1DO94832 1006 aa10.95□□□□□ -0.66
CNOT4-208ENST00000465721 C8GP07360 202 aa10.95□□□□□ -0.66
CNOT4-208ENST00000465721 RNH1P13489 461 aaKnown RBP10.95□□□□□ -0.66
CNOT4-208ENST00000465721 DRD2P14416 443 aa10.95□□□□□ -0.66
CNOT4-208ENST00000465721 ACVR2AP27037 513 aa10.95□□□□□ -0.66
CNOT4-208ENST00000465721 CCR8P51685 355 aa10.95□□□□□ -0.66
CNOT4-208ENST00000465721 CLCN2P51788 898 aa10.95□□□□□ -0.66
CNOT4-208ENST00000465721 PPP2R2AP63151 447 aa10.95□□□□□ -0.66
CNOT4-208ENST00000465721 DHX9Q08211 1270 aaKnown RBP10.95□□□□□ -0.66
CNOT4-208ENST00000465721 HYAL2Q12891 473 aa10.95□□□□□ -0.66
CNOT4-208ENST00000465721 CEBPEQ15744 281 aa10.95□□□□□ -0.66
CNOT4-208ENST00000465721 GXYLT1Q4G148 440 aa10.95□□□□□ -0.66
CNOT4-208ENST00000465721 ANKRD22Q5VYY1 191 aa10.95□□□□□ -0.66
CNOT4-208ENST00000465721 RTL6Q6ICC9 239 aa10.95□□□□□ -0.66
CNOT4-208ENST00000465721 LRRC8EQ6NSJ5 796 aa10.95□□□□□ -0.66
CNOT4-208ENST00000465721 CASC4Q6P4E1 433 aa10.95□□□□□ -0.66
CNOT4-208ENST00000465721 C16orf47Q6ZP98 133 aaPredicted RBP10.95□□□□□ -0.66
CNOT4-208ENST00000465721 ABHD13Q7L211 337 aa10.95□□□□□ -0.66
CNOT4-208ENST00000465721 CAND1Q86VP6 1230 aaKnown RBP10.95□□□□□ -0.66
CNOT4-208ENST00000465721 LIX1LQ8IVB5 337 aa10.95□□□□□ -0.66
CNOT4-208ENST00000465721 TMEM156Q8N614 296 aa10.95□□□□□ -0.66
CNOT4-208ENST00000465721 OR2M7Q8NG81 312 aa10.95□□□□□ -0.66
CNOT4-208ENST00000465721 ALKBH8Q96BT7 664 aaKnown RBP10.95□□□□□ -0.66
CNOT4-208ENST00000465721 PDLIM2Q96JY6 352 aa10.95□□□□□ -0.66
CNOT4-208ENST00000465721 GPATCH1Q9BRR8 931 aaKnown RBP10.95□□□□□ -0.66
CNOT4-208ENST00000465721 TTYH2Q9BSA4 534 aa10.95□□□□□ -0.66
CNOT4-208ENST00000465721 HAUS8Q9BT25 410 aa10.95□□□□□ -0.66
CNOT4-208ENST00000465721 AARSD1Q9BTE6 412 aaKnown RBP10.95□□□□□ -0.66
CNOT4-208ENST00000465721 SLC6A16Q9GZN6 736 aa10.95□□□□□ -0.66
CNOT4-208ENST00000465721 AICDAQ9GZX7 198 aa10.95□□□□□ -0.66
CNOT4-208ENST00000465721 PARVBQ9HBI1 364 aa10.95□□□□□ -0.66
CNOT4-208ENST00000465721 TIMMDC1Q9NPL8 285 aa10.95□□□□□ -0.66
CNOT4-208ENST00000465721 KCMF1Q9P0J7 381 aa10.95□□□□□ -0.66
CNOT4-208ENST00000465721 ZFATQ9P243 1243 aa10.95□□□□□ -0.66
CNOT4-208ENST00000465721 CLDN16Q9Y5I7 305 aa10.95□□□□□ -0.66
CNOT4-208ENST00000465721 COMMD10Q9Y6G5 202 aa10.95□□□□□ -0.66
CNOT4-208ENST00000465721 MED12Q93074 2177 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 ATRQ13535 2644 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 A0A0G2JNJ9 132 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 FIGNL2A6NMB9 653 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 TGFBR3LH3BV60 316 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 GLSO94925 669 aaPredicted RBP10.94□□□□□ -0.66
CNOT4-208ENST00000465721 IGHG3P01860 377 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 SERPIND1P05546 499 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 SMIM10L1P0DMW3 83 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 GLI4P10075 376 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 PTMSP20962 102 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 PPP2R1BP30154 601 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 AHRP35869 848 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 ADH7P40394 386 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 SCTRP47872 440 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 KCNJ1P48048 391 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 SSR4P51571 173 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 GPR143P51810 404 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 ZNF75DP51815 510 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 TERF1P54274 439 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 RAB8AP61006 207 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 PPIAP62937 165 aaKnown RBP10.94□□□□□ -0.66
CNOT4-208ENST00000465721 REEP5Q00765 189 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 RGS1Q08116 209 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 THOC5Q13769 683 aaKnown RBP10.94□□□□□ -0.66
CNOT4-208ENST00000465721 CATSPEREQ5SY80 951 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 B3GNT6Q6ZMB0 384 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 GSTA5Q7RTV2 222 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 SCUBE1Q8IWY4 988 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 ZZZ3Q8IYH5 903 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 CA13Q8N1Q1 262 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 AGGF1Q8N302 714 aaeCLIP10.94□□□□□ -0.66
CNOT4-208ENST00000465721 ANKRD53Q8N9V6 530 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 OR5M9Q8NGP3 310 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 OR56A3Q8NH54 315 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 EEF1AKMT1Q8WVE0 214 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 NCLNQ969V3 563 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 PYCR2Q96C36 320 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 VMP1Q96GC9 406 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 SNF8Q96H20 258 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 SMIM10Q96HG1 83 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 ALPK1Q96QP1 1244 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 SMC6Q96SB8 1091 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 BAG1Q99933 345 aaPredicted RBP10.94□□□□□ -0.66
CNOT4-208ENST00000465721 POLDIP3Q9BY77 421 aaKnown RBP10.94□□□□□ -0.66
CNOT4-208ENST00000465721 TTTY12Q9BZ98 90 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 CLK4Q9HAZ1 481 aaKnown RBP10.94□□□□□ -0.66
CNOT4-208ENST00000465721 SAMD15Q9P1V8 674 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 Q9UFV3 132 aa10.94□□□□□ -0.66
CNOT4-208ENST00000465721 TRMT6Q9UJA5 497 aaKnown RBP10.94□□□□□ -0.66
CNOT4-208ENST00000465721 ZFP69BQ9UJL9 534 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms