RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 RHAGQ02094 409 aa16.5■□□□□ 0.23
SCARNA2-201ENST00000458748 HYAL2Q12891 473 aa16.5■□□□□ 0.23
SCARNA2-201ENST00000458748 ZNF169Q14929 603 aaPredicted RBP16.5■□□□□ 0.23
SCARNA2-201ENST00000458748 BTBD16Q32M84 506 aa16.5■□□□□ 0.23
SCARNA2-201ENST00000458748 FBXO48Q5FWF7 155 aa16.5■□□□□ 0.23
SCARNA2-201ENST00000458748 ABHD17BQ5VST6 288 aa16.5■□□□□ 0.23
SCARNA2-201ENST00000458748 MED27Q6P2C8 311 aa16.5■□□□□ 0.23
SCARNA2-201ENST00000458748 QSOX2Q6ZRP7 698 aa16.5■□□□□ 0.23
SCARNA2-201ENST00000458748 M1APQ8TC57 530 aa16.5■□□□□ 0.23
SCARNA2-201ENST00000458748 SMIM10Q96HG1 83 aa16.5■□□□□ 0.23
SCARNA2-201ENST00000458748 PTCHD1Q96NR3 888 aa16.5■□□□□ 0.23
SCARNA2-201ENST00000458748 MESP1Q9BRJ9 268 aa16.5■□□□□ 0.23
SCARNA2-201ENST00000458748 CENPKQ9BS16 269 aa16.5■□□□□ 0.23
SCARNA2-201ENST00000458748 RBCK1Q9BYM8 510 aa16.5■□□□□ 0.23
SCARNA2-201ENST00000458748 KLHL31Q9H511 634 aa16.5■□□□□ 0.23
SCARNA2-201ENST00000458748 LANCL2Q9NS86 450 aa16.5■□□□□ 0.23
SCARNA2-201ENST00000458748 ABI3Q9P2A4 366 aa16.5■□□□□ 0.23
SCARNA2-201ENST00000458748 RELNP78509 3460 aa16.5■□□□□ 0.23
SCARNA2-201ENST00000458748 HMX2A2RU54 273 aa16.49■□□□□ 0.23
SCARNA2-201ENST00000458748 CLDN4O14493 209 aa16.49■□□□□ 0.23
SCARNA2-201ENST00000458748 B4GALT2O60909 372 aa16.49■□□□□ 0.23
SCARNA2-201ENST00000458748 SEC24DO94855 1032 aaPredicted RBP16.49■□□□□ 0.23
SCARNA2-201ENST00000458748 TAS2R50P59544 299 aa16.49■□□□□ 0.23
SCARNA2-201ENST00000458748 IRF9Q00978 393 aa16.49■□□□□ 0.23
SCARNA2-201ENST00000458748 PCDH1Q08174 1060 aa16.49■□□□□ 0.23
SCARNA2-201ENST00000458748 NAA30Q147X3 362 aaPredicted RBP16.49■□□□□ 0.23
SCARNA2-201ENST00000458748 SETDB1Q15047 1291 aa16.49■□□□□ 0.23
SCARNA2-201ENST00000458748 PFKFB4Q16877 469 aa16.49■□□□□ 0.23
SCARNA2-201ENST00000458748 SFT2D3Q587I9 215 aa16.49■□□□□ 0.23
SCARNA2-201ENST00000458748 LANCL3Q6ZV70 420 aa16.49■□□□□ 0.23
SCARNA2-201ENST00000458748 CHSY3Q70JA7 882 aa16.49■□□□□ 0.23
SCARNA2-201ENST00000458748 SIRT6Q8N6T7 355 aa16.49■□□□□ 0.23
SCARNA2-201ENST00000458748 C7orf57Q8NEG2 295 aa16.49■□□□□ 0.23
SCARNA2-201ENST00000458748 SUN3Q8TAQ9 357 aa16.49■□□□□ 0.23
SCARNA2-201ENST00000458748 ISL2Q96A47 359 aa16.49■□□□□ 0.23
SCARNA2-201ENST00000458748 REPS1Q96D71 796 aa16.49■□□□□ 0.23
SCARNA2-201ENST00000458748 SNRNP40Q96DI7 357 aaKnown RBP16.49■□□□□ 0.23
SCARNA2-201ENST00000458748 MS4A6EQ96DS6 147 aa16.49■□□□□ 0.23
SCARNA2-201ENST00000458748 KCNC2Q96PR1 638 aa16.49■□□□□ 0.23
SCARNA2-201ENST00000458748 SERINC2Q96SA4 455 aa16.49■□□□□ 0.23
SCARNA2-201ENST00000458748 RNF32Q9H0A6 362 aa16.49■□□□□ 0.23
SCARNA2-201ENST00000458748 PRDM9Q9NQV7 894 aa16.49■□□□□ 0.23
SCARNA2-201ENST00000458748 MMACHCQ9Y4U1 282 aa16.49■□□□□ 0.23
SCARNA2-201ENST00000458748 PCDHGA10Q9Y5H3 936 aa16.49■□□□□ 0.23
SCARNA2-201ENST00000458748 COPG1Q9Y678 874 aaKnown RBP16.49■□□□□ 0.23
SCARNA2-201ENST00000458748 SPACA6W5XKT8 324 aa16.49■□□□□ 0.23
SCARNA2-201ENST00000458748 USP9XQ93008 2570 aaPredicted RBP16.49■□□□□ 0.23
SCARNA2-201ENST00000458748 SCN2AQ99250 2005 aa16.48■□□□□ 0.23
SCARNA2-201ENST00000458748 UGDHO60701 494 aa16.48■□□□□ 0.23
SCARNA2-201ENST00000458748 SMIM24O75264 130 aa16.48■□□□□ 0.23
SCARNA2-201ENST00000458748 RHOXF2BP0C7M4 288 aa16.48■□□□□ 0.23
SCARNA2-201ENST00000458748 GNLYP22749 145 aa16.48■□□□□ 0.23
SCARNA2-201ENST00000458748 SOX11P35716 441 aa16.48■□□□□ 0.23
SCARNA2-201ENST00000458748 TSFMP43897 325 aaKnown RBP16.48■□□□□ 0.23
SCARNA2-201ENST00000458748 PLA2G16P53816 162 aa16.48■□□□□ 0.23
SCARNA2-201ENST00000458748 MTTPP55157 894 aa16.48■□□□□ 0.23
SCARNA2-201ENST00000458748 ADPRMQ3LIE5 342 aa16.48■□□□□ 0.23
SCARNA2-201ENST00000458748 TMEM35AQ53FP2 167 aa16.48■□□□□ 0.23
SCARNA2-201ENST00000458748 PRR30Q53SZ7 412 aaPredicted RBP16.48■□□□□ 0.23
SCARNA2-201ENST00000458748 PAPD4Q6PIY7 484 aaKnown RBP16.48■□□□□ 0.23
SCARNA2-201ENST00000458748 CUZD1Q86UP6 607 aa16.48■□□□□ 0.23
SCARNA2-201ENST00000458748 MYLK4Q86YV6 388 aaPredicted RBP16.48■□□□□ 0.23
SCARNA2-201ENST00000458748 TEX9Q8N6V9 391 aa16.48■□□□□ 0.23
SCARNA2-201ENST00000458748 PSMF1Q92530 271 aa16.48■□□□□ 0.23
SCARNA2-201ENST00000458748 MTBPQ96DY7 904 aa16.48■□□□□ 0.23
SCARNA2-201ENST00000458748 SCYL1Q96KG9 808 aa16.48■□□□□ 0.23
SCARNA2-201ENST00000458748 ZNF354BQ96LW1 612 aa16.48■□□□□ 0.23
SCARNA2-201ENST00000458748 BARD1Q99728 777 aaKnown RBP16.48■□□□□ 0.23
SCARNA2-201ENST00000458748 RHOXF2Q9BQY4 288 aa16.48■□□□□ 0.23
SCARNA2-201ENST00000458748 CCDC77Q9BR77 488 aa16.48■□□□□ 0.23
SCARNA2-201ENST00000458748 KCNK13Q9HB14 408 aa16.48■□□□□ 0.23
SCARNA2-201ENST00000458748 CPSF2Q9P2I0 782 aaKnown RBP16.48■□□□□ 0.23
SCARNA2-201ENST00000458748 ZNF490Q9ULM2 529 aaPredicted RBP16.48■□□□□ 0.23
SCARNA2-201ENST00000458748 CNTRLQ7Z7A1 2325 aa16.48■□□□□ 0.23
SCARNA2-201ENST00000458748 USP9YO00507 2555 aaPredicted RBP16.47■□□□□ 0.23
SCARNA2-201ENST00000458748 TRAV17A0A0B4J275 112 aa16.47■□□□□ 0.23
SCARNA2-201ENST00000458748 BLACEA4D250 179 aa16.47■□□□□ 0.23
SCARNA2-201ENST00000458748 TCP11X1B4DZS4 312 aa16.47■□□□□ 0.23
SCARNA2-201ENST00000458748 KLK8O60259 260 aa16.47■□□□□ 0.23
SCARNA2-201ENST00000458748 SNRPAP09012 282 aaKnown RBP16.47■□□□□ 0.23
SCARNA2-201ENST00000458748 ITGAMP11215 1152 aa16.47■□□□□ 0.23
SCARNA2-201ENST00000458748 PCNAP12004 261 aa16.47■□□□□ 0.23
SCARNA2-201ENST00000458748 MTHFD2P13995 350 aa16.47■□□□□ 0.23
SCARNA2-201ENST00000458748 HNRNPH1P31943 449 aaKnown RBP16.47■□□□□ 0.23
SCARNA2-201ENST00000458748 GMPRP36959 345 aa16.47■□□□□ 0.23
SCARNA2-201ENST00000458748 EFNA3P52797 238 aa16.47■□□□□ 0.23
SCARNA2-201ENST00000458748 HSD17B7P56937 341 aa16.47■□□□□ 0.23
SCARNA2-201ENST00000458748 E2F2Q14209 437 aa16.47■□□□□ 0.23
SCARNA2-201ENST00000458748 ELOAQ14241 798 aaKnown RBP16.47■□□□□ 0.23
SCARNA2-201ENST00000458748 ESPL1Q14674 2120 aa16.47■□□□□ 0.23
SCARNA2-201ENST00000458748 PCBP2Q15366 365 aaKnown RBP eCLIP16.47■□□□□ 0.23
SCARNA2-201ENST00000458748 LIPJQ5W064 366 aa16.47■□□□□ 0.23
SCARNA2-201ENST00000458748 GRHL2Q6ISB3 625 aa16.47■□□□□ 0.23
SCARNA2-201ENST00000458748 LAS2Q8IYD9 372 aa16.47■□□□□ 0.23
SCARNA2-201ENST00000458748 CYP4X1Q8N118 509 aa16.47■□□□□ 0.23
SCARNA2-201ENST00000458748 CA13Q8N1Q1 262 aa16.47■□□□□ 0.23
SCARNA2-201ENST00000458748 CISD2Q8N5K1 135 aaKnown RBP16.47■□□□□ 0.23
SCARNA2-201ENST00000458748 SLC5A8Q8N695 610 aa16.47■□□□□ 0.23
SCARNA2-201ENST00000458748 EIF1ADQ8N9N8 165 aaKnown RBP16.47■□□□□ 0.23
SCARNA2-201ENST00000458748 HAS2Q92819 552 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms