RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 PCBP2Q15366 365 aaKnown RBP eCLIP23.61■■□□□ 1.37
HTATSF1-203ENST00000448450 EIF2S3LQ2VIR3 472 aaKnown RBP23.61■■□□□ 1.37
HTATSF1-203ENST00000448450 MYLK4Q86YV6 388 aaPredicted RBP23.61■■□□□ 1.37
HTATSF1-203ENST00000448450 METTL21AQ8WXB1 218 aa23.61■■□□□ 1.37
HTATSF1-203ENST00000448450 PNPLA2Q96AD5 504 aa23.61■■□□□ 1.37
HTATSF1-203ENST00000448450 MFRPQ9BY79 579 aa23.61■■□□□ 1.37
HTATSF1-203ENST00000448450 RHBGQ9H310 441 aa23.61■■□□□ 1.37
HTATSF1-203ENST00000448450 FETUBQ9UGM5 382 aa23.61■■□□□ 1.37
HTATSF1-203ENST00000448450 TNPO3Q9Y5L0 923 aaKnown RBP23.61■■□□□ 1.37
HTATSF1-203ENST00000448450 CACNA1DQ01668 2161 aa23.6■■□□□ 1.37
HTATSF1-203ENST00000448450 ERI3O43414 337 aaKnown RBP23.6■■□□□ 1.37
HTATSF1-203ENST00000448450 SMIM24O75264 130 aa23.6■■□□□ 1.37
HTATSF1-203ENST00000448450 C8orf89P0DMQ9 161 aa23.6■■□□□ 1.37
HTATSF1-203ENST00000448450 EEF1DP29692 281 aaKnown RBP23.6■■□□□ 1.37
HTATSF1-203ENST00000448450 SLCO1A2P46721 670 aa23.6■■□□□ 1.37
HTATSF1-203ENST00000448450 GTF2H2Q13888 395 aa23.6■■□□□ 1.37
HTATSF1-203ENST00000448450 MYBPC3Q14896 1274 aa23.6■■□□□ 1.37
HTATSF1-203ENST00000448450 SLC6A19Q695T7 634 aa23.6■■□□□ 1.37
HTATSF1-203ENST00000448450 GTF2H2CQ6P1K8 395 aa23.6■■□□□ 1.37
HTATSF1-203ENST00000448450 MED27Q6P2C8 311 aa23.6■■□□□ 1.37
HTATSF1-203ENST00000448450 GOLGA7Q7Z5G4 137 aa23.6■■□□□ 1.37
HTATSF1-203ENST00000448450 AMER2Q8N7J2 671 aa23.6■■□□□ 1.37
HTATSF1-203ENST00000448450 Q8NA96 180 aa23.6■■□□□ 1.37
HTATSF1-203ENST00000448450 PRR7Q8TB68 274 aa23.6■■□□□ 1.37
HTATSF1-203ENST00000448450 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.6■■□□□ 1.37
HTATSF1-203ENST00000448450 GAL3ST3Q96A11 431 aa23.6■■□□□ 1.37
HTATSF1-203ENST00000448450 MS4A6EQ96DS6 147 aa23.6■■□□□ 1.37
HTATSF1-203ENST00000448450 FAR2Q96K12 515 aa23.6■■□□□ 1.37
HTATSF1-203ENST00000448450 MRPL57Q9BQC6 102 aaKnown RBP23.6■■□□□ 1.37
HTATSF1-203ENST00000448450 NSG1A0A0A6YYJ2 146 aa23.59■■□□□ 1.37
HTATSF1-203ENST00000448450 SMIM23A6NLE4 172 aa23.59■■□□□ 1.37
HTATSF1-203ENST00000448450 FOXO6A8MYZ6 492 aa23.59■■□□□ 1.37
HTATSF1-203ENST00000448450 B4GALT2O60909 372 aa23.59■■□□□ 1.37
HTATSF1-203ENST00000448450 SH3BGRLO75368 114 aa23.59■■□□□ 1.37
HTATSF1-203ENST00000448450 TBX6O95947 436 aaPredicted RBP23.59■■□□□ 1.37
HTATSF1-203ENST00000448450 HPP00738 406 aa23.59■■□□□ 1.37
HTATSF1-203ENST00000448450 COX6A1P12074 109 aa23.59■■□□□ 1.37
HTATSF1-203ENST00000448450 GSTM2P28161 218 aa23.59■■□□□ 1.37
HTATSF1-203ENST00000448450 PLA2G16P53816 162 aa23.59■■□□□ 1.37
HTATSF1-203ENST00000448450 Q0VFX4 171 aa23.59■■□□□ 1.37
HTATSF1-203ENST00000448450 NIPAL1Q6NVV3 410 aa23.59■■□□□ 1.37
HTATSF1-203ENST00000448450 TMEM205Q6UW68 189 aa23.59■■□□□ 1.37
HTATSF1-203ENST00000448450 LANCL3Q6ZV70 420 aa23.59■■□□□ 1.37
HTATSF1-203ENST00000448450 NDUFAF7Q7L592 441 aa23.59■■□□□ 1.37
HTATSF1-203ENST00000448450 TBC1D20Q96BZ9 403 aa23.59■■□□□ 1.37
HTATSF1-203ENST00000448450 SEC16BQ96JE7 1060 aa23.59■■□□□ 1.37
HTATSF1-203ENST00000448450 F2RL3Q96RI0 385 aa23.59■■□□□ 1.37
HTATSF1-203ENST00000448450 REXO4Q9GZR2 422 aaKnown RBP23.59■■□□□ 1.37
HTATSF1-203ENST00000448450 MRPL46Q9H2W6 279 aaKnown RBP23.59■■□□□ 1.37
HTATSF1-203ENST00000448450 IPPKQ9H8X2 491 aa23.59■■□□□ 1.37
HTATSF1-203ENST00000448450 ACTR8Q9H981 624 aa23.59■■□□□ 1.37
HTATSF1-203ENST00000448450 TMEM216Q9P0N5 145 aa23.59■■□□□ 1.37
HTATSF1-203ENST00000448450 IGHV3-20A0A0C4DH32 117 aa23.58■■□□□ 1.37
HTATSF1-203ENST00000448450 ENO4A6NNW6 628 aa23.58■■□□□ 1.37
HTATSF1-203ENST00000448450 FHP07954 510 aa23.58■■□□□ 1.37
HTATSF1-203ENST00000448450 PYGBP11216 843 aa23.58■■□□□ 1.37
HTATSF1-203ENST00000448450 SOX8P57073 446 aa23.58■■□□□ 1.37
HTATSF1-203ENST00000448450 MAMDC2Q7Z304 686 aaPredicted RBP23.58■■□□□ 1.37
HTATSF1-203ENST00000448450 UBE2E3Q969T4 207 aa23.58■■□□□ 1.37
HTATSF1-203ENST00000448450 THOC3Q96J01 351 aaKnown RBP23.58■■□□□ 1.37
HTATSF1-203ENST00000448450 SMAD5Q99717 465 aaKnown RBP23.58■■□□□ 1.37
HTATSF1-203ENST00000448450 ZNF552Q9H707 407 aaPredicted RBP23.58■■□□□ 1.37
HTATSF1-203ENST00000448450 LANCL2Q9NS86 450 aa23.58■■□□□ 1.37
HTATSF1-203ENST00000448450 TMCO1Q9UM00 188 aa23.58■■□□□ 1.37
HTATSF1-203ENST00000448450 IGHV1-45A0A0A0MS14 117 aa23.57■■□□□ 1.36
HTATSF1-203ENST00000448450 A0A1W2PPM1 405 aa23.57■■□□□ 1.36
HTATSF1-203ENST00000448450 FAM227AF5H4B4 570 aa23.57■■□□□ 1.36
HTATSF1-203ENST00000448450 E2F3O00716 465 aa23.57■■□□□ 1.36
HTATSF1-203ENST00000448450 SBK3P0C264 359 aa23.57■■□□□ 1.36
HTATSF1-203ENST00000448450 IL10P22301 178 aa23.57■■□□□ 1.36
HTATSF1-203ENST00000448450 ARL1P40616 181 aaPredicted RBP23.57■■□□□ 1.36
HTATSF1-203ENST00000448450 PCDH1Q08174 1060 aa23.57■■□□□ 1.36
HTATSF1-203ENST00000448450 DDX39BQ13838 428 aaKnown RBP23.57■■□□□ 1.36
HTATSF1-203ENST00000448450 E2F2Q14209 437 aa23.57■■□□□ 1.36
HTATSF1-203ENST00000448450 VWA5B1Q5TIE3 1220 aa23.57■■□□□ 1.36
HTATSF1-203ENST00000448450 IRAK1BP1Q5VVH5 260 aa23.57■■□□□ 1.36
HTATSF1-203ENST00000448450 GRHL2Q6ISB3 625 aa23.57■■□□□ 1.36
HTATSF1-203ENST00000448450 LAS2Q8IYD9 372 aa23.57■■□□□ 1.36
HTATSF1-203ENST00000448450 RNF175Q8N4F7 328 aa23.57■■□□□ 1.36
HTATSF1-203ENST00000448450 TMEM151AQ8N4L1 468 aa23.57■■□□□ 1.36
HTATSF1-203ENST00000448450 RBMXL3Q8N7X1 1067 aaKnown RBP23.57■■□□□ 1.36
HTATSF1-203ENST00000448450 OR2L5Q8NG80 312 aa23.57■■□□□ 1.36
HTATSF1-203ENST00000448450 OR7G3Q8NG95 312 aa23.57■■□□□ 1.36
HTATSF1-203ENST00000448450 ZNF473Q8WTR7 871 aaKnown RBP23.57■■□□□ 1.36
HTATSF1-203ENST00000448450 ATP6V1E2Q96A05 226 aa23.57■■□□□ 1.36
HTATSF1-203ENST00000448450 OR1F2PQ96R84 312 aa23.57■■□□□ 1.36
HTATSF1-203ENST00000448450 NOL11Q9H8H0 719 aaKnown RBP23.57■■□□□ 1.36
HTATSF1-203ENST00000448450 LOC102723996A0A087X1L8 192 aa23.56■■□□□ 1.36
HTATSF1-203ENST00000448450 STX16-NPEPL1H3BU86 382 aa23.56■■□□□ 1.36
HTATSF1-203ENST00000448450 STX16O14662 325 aa23.56■■□□□ 1.36
HTATSF1-203ENST00000448450 TGFB1P01137 390 aa23.56■■□□□ 1.36
HTATSF1-203ENST00000448450 RNH1P13489 461 aaKnown RBP23.56■■□□□ 1.36
HTATSF1-203ENST00000448450 HSD17B3P37058 310 aa23.56■■□□□ 1.36
HTATSF1-203ENST00000448450 PIK3CGP48736 1102 aa23.56■■□□□ 1.36
HTATSF1-203ENST00000448450 RHAGQ02094 409 aa23.56■■□□□ 1.36
HTATSF1-203ENST00000448450 RUNX2Q13950 521 aa23.56■■□□□ 1.36
HTATSF1-203ENST00000448450 PCOLCEQ15113 449 aa23.56■■□□□ 1.36
HTATSF1-203ENST00000448450 TRIM40Q6P9F5 258 aa23.56■■□□□ 1.36
HTATSF1-203ENST00000448450 RPS27LQ71UM5 84 aaKnown RBP23.56■■□□□ 1.36
HTATSF1-203ENST00000448450 CPEB2Q7Z5Q1 589 aaKnown RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms