RNA–Protein interactions for RNA: ENST00000447696.5

MRPL28-205, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 3

Gene MRPL28, Length 722 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-205ENST00000447696 SIRT6Q8N6T7 355 aa22.57■■□□□ 1.2
MRPL28-205ENST00000447696 CCT6BQ92526 530 aa22.57■■□□□ 1.2
MRPL28-205ENST00000447696 FAR2Q96K12 515 aa22.57■■□□□ 1.2
MRPL28-205ENST00000447696 NPLQ9BXD5 320 aaPredicted RBP22.57■■□□□ 1.2
MRPL28-205ENST00000447696 RNF32Q9H0A6 362 aa22.57■■□□□ 1.2
MRPL28-205ENST00000447696 OPTCQ9UBM4 332 aa22.57■■□□□ 1.2
MRPL28-205ENST00000447696 ZNF490Q9ULM2 529 aaPredicted RBP22.57■■□□□ 1.2
MRPL28-205ENST00000447696 IKBKGQ9Y6K9 419 aa22.57■■□□□ 1.2
MRPL28-205ENST00000447696 SHANK1Q9Y566 2161 aa22.57■■□□□ 1.2
MRPL28-205ENST00000447696 IGHV3-20A0A0C4DH32 117 aa22.56■■□□□ 1.2
MRPL28-205ENST00000447696 DYTNA2CJ06 578 aa22.56■■□□□ 1.2
MRPL28-205ENST00000447696 PSMD12O00232 456 aaPredicted RBP22.56■■□□□ 1.2
MRPL28-205ENST00000447696 UQCRHP07919 91 aa22.56■■□□□ 1.2
MRPL28-205ENST00000447696 CD22P20273 847 aa22.56■■□□□ 1.2
MRPL28-205ENST00000447696 MAGEA12P43365 314 aa22.56■■□□□ 1.2
MRPL28-205ENST00000447696 CHIT1Q13231 466 aa22.56■■□□□ 1.2
MRPL28-205ENST00000447696 BTBD16Q32M84 506 aa22.56■■□□□ 1.2
MRPL28-205ENST00000447696 SFT2D3Q587I9 215 aa22.56■■□□□ 1.2
MRPL28-205ENST00000447696 VN1R5Q7Z5H4 357 aa22.56■■□□□ 1.2
MRPL28-205ENST00000447696 IFT20Q8IY31 132 aa22.56■■□□□ 1.2
MRPL28-205ENST00000447696 CISD2Q8N5K1 135 aaKnown RBP22.56■■□□□ 1.2
MRPL28-205ENST00000447696 OR2L5Q8NG80 312 aa22.56■■□□□ 1.2
MRPL28-205ENST00000447696 M1APQ8TC57 530 aa22.56■■□□□ 1.2
MRPL28-205ENST00000447696 TSLPQ969D9 159 aa22.56■■□□□ 1.2
MRPL28-205ENST00000447696 UBE2E3Q969T4 207 aa22.56■■□□□ 1.2
MRPL28-205ENST00000447696 CNDP1Q96KN2 507 aa22.56■■□□□ 1.2
MRPL28-205ENST00000447696 PAFAH2Q99487 392 aa22.56■■□□□ 1.2
MRPL28-205ENST00000447696 LPAR4Q99677 370 aa22.56■■□□□ 1.2
MRPL28-205ENST00000447696 BARD1Q99728 777 aaKnown RBP22.56■■□□□ 1.2
MRPL28-205ENST00000447696 MAP10Q9P2G4 905 aa22.56■■□□□ 1.2
MRPL28-205ENST00000447696 TEKT2Q9UIF3 430 aa22.56■■□□□ 1.2
MRPL28-205ENST00000447696 ZNF180Q9UJW8 692 aa22.56■■□□□ 1.2
MRPL28-205ENST00000447696 A0A087WUV0 522 aaPredicted RBP22.55■■□□□ 1.2
MRPL28-205ENST00000447696 ERI3O43414 337 aaKnown RBP22.55■■□□□ 1.2
MRPL28-205ENST00000447696 KLK8O60259 260 aa22.55■■□□□ 1.2
MRPL28-205ENST00000447696 KRT38O76015 456 aa22.55■■□□□ 1.2
MRPL28-205ENST00000447696 TBX6O95947 436 aaPredicted RBP22.55■■□□□ 1.2
MRPL28-205ENST00000447696 GNLYP22749 145 aa22.55■■□□□ 1.2
MRPL28-205ENST00000447696 CNTFP26441 200 aa22.55■■□□□ 1.2
MRPL28-205ENST00000447696 SERPINB1P30740 379 aa22.55■■□□□ 1.2
MRPL28-205ENST00000447696 BTN3A2P78410 334 aa22.55■■□□□ 1.2
MRPL28-205ENST00000447696 ARG2P78540 354 aa22.55■■□□□ 1.2
MRPL28-205ENST00000447696 NAA30Q147X3 362 aaPredicted RBP22.55■■□□□ 1.2
MRPL28-205ENST00000447696 SETDB1Q15047 1291 aa22.55■■□□□ 1.2
MRPL28-205ENST00000447696 PAPD4Q6PIY7 484 aaKnown RBP22.55■■□□□ 1.2
MRPL28-205ENST00000447696 CA13Q8N1Q1 262 aa22.55■■□□□ 1.2
MRPL28-205ENST00000447696 ADAMTS18Q8TE60 1221 aa22.55■■□□□ 1.2
MRPL28-205ENST00000447696 SSC4DQ8WTU2 575 aa22.55■■□□□ 1.2
MRPL28-205ENST00000447696 HAS2Q92819 552 aa22.55■■□□□ 1.2
MRPL28-205ENST00000447696 GPR78Q96P69 363 aa22.55■■□□□ 1.2
MRPL28-205ENST00000447696 REXO4Q9GZR2 422 aaKnown RBP22.55■■□□□ 1.2
MRPL28-205ENST00000447696 MMP25Q9NPA2 562 aa22.55■■□□□ 1.2
MRPL28-205ENST00000447696 ASF1BQ9NVP2 202 aa22.55■■□□□ 1.2
MRPL28-205ENST00000447696 COPG1Q9Y678 874 aaKnown RBP22.55■■□□□ 1.2
MRPL28-205ENST00000447696 PRMT3O60678 531 aa22.54■■□□□ 1.2
MRPL28-205ENST00000447696 B4GALT2O60909 372 aa22.54■■□□□ 1.2
MRPL28-205ENST00000447696 EPB42P16452 691 aa22.54■■□□□ 1.2
MRPL28-205ENST00000447696 UQCRFS1P47985 274 aa22.54■■□□□ 1.2
MRPL28-205ENST00000447696 GLRBP48167 497 aa22.54■■□□□ 1.2
MRPL28-205ENST00000447696 ALDH18A1P54886 795 aaKnown RBP22.54■■□□□ 1.2
MRPL28-205ENST00000447696 OR4D2P58180 307 aa22.54■■□□□ 1.2
MRPL28-205ENST00000447696 ACTN3Q08043 901 aaPredicted RBP22.54■■□□□ 1.2
MRPL28-205ENST00000447696 TGM3Q08188 693 aa22.54■■□□□ 1.2
MRPL28-205ENST00000447696 ABHD17BQ5VST6 288 aa22.54■■□□□ 1.2
MRPL28-205ENST00000447696 H3F3CQ6NXT2 135 aa22.54■■□□□ 1.2
MRPL28-205ENST00000447696 METTL2BQ6P1Q9 378 aaKnown RBP22.54■■□□□ 1.2
MRPL28-205ENST00000447696 TRIM40Q6P9F5 258 aa22.54■■□□□ 1.2
MRPL28-205ENST00000447696 C19orf60Q96EN9 201 aa22.54■■□□□ 1.2
MRPL28-205ENST00000447696 QRFPRQ96P65 431 aa22.54■■□□□ 1.2
MRPL28-205ENST00000447696 VPS11Q9H270 941 aa22.54■■□□□ 1.2
MRPL28-205ENST00000447696 PRDM9Q9NQV7 894 aa22.54■■□□□ 1.2
MRPL28-205ENST00000447696 MMACHCQ9Y4U1 282 aa22.54■■□□□ 1.2
MRPL28-205ENST00000447696 CNTRLQ7Z7A1 2325 aa22.54■■□□□ 1.2
MRPL28-205ENST00000447696 ITPR2Q14571 2701 aa22.54■■□□□ 1.2
MRPL28-205ENST00000447696 IGKV3D-11A0A0A0MRZ8 115 aa22.53■■□□□ 1.2
MRPL28-205ENST00000447696 TCP11X1B4DZS4 312 aa22.53■■□□□ 1.2
MRPL28-205ENST00000447696 B3GALT2O43825 422 aa22.53■■□□□ 1.2
MRPL28-205ENST00000447696 ABHD2P08910 425 aa22.53■■□□□ 1.2
MRPL28-205ENST00000447696 GFAPP14136 432 aa22.53■■□□□ 1.2
MRPL28-205ENST00000447696 MSH2P43246 934 aa22.53■■□□□ 1.2
MRPL28-205ENST00000447696 TNFSF10P50591 281 aa22.53■■□□□ 1.2
MRPL28-205ENST00000447696 RPUSD3Q6P087 351 aaKnown RBP22.53■■□□□ 1.2
MRPL28-205ENST00000447696 ABHD17CQ6PCB6 329 aa22.53■■□□□ 1.2
MRPL28-205ENST00000447696 LAS2Q8IYD9 372 aa22.53■■□□□ 1.2
MRPL28-205ENST00000447696 ARMC2Q8NEN0 867 aa22.53■■□□□ 1.2
MRPL28-205ENST00000447696 PTCHD1Q96NR3 888 aa22.53■■□□□ 1.2
MRPL28-205ENST00000447696 AGPAT4Q9NRZ5 378 aa22.53■■□□□ 1.2
MRPL28-205ENST00000447696 NFU1Q9UMS0 254 aa22.53■■□□□ 1.2
MRPL28-205ENST00000447696 TNPO3Q9Y5L0 923 aaKnown RBP22.53■■□□□ 1.2
MRPL28-205ENST00000447696 CENPEQ02224 2701 aa22.52■■□□□ 1.2
MRPL28-205ENST00000447696 TRAV17A0A0B4J275 112 aa22.52■■□□□ 1.2
MRPL28-205ENST00000447696 TCRBV16S1A1N1A0A5B0 115 aa22.52■■□□□ 1.2
MRPL28-205ENST00000447696 PCBP2Q15366 365 aaKnown RBP eCLIP22.52■■□□□ 1.2
MRPL28-205ENST00000447696 PFKFB4Q16877 469 aa22.52■■□□□ 1.2
MRPL28-205ENST00000447696 TECRLQ5HYJ1 363 aa22.52■■□□□ 1.2
MRPL28-205ENST00000447696 ADNP2Q6IQ32 1131 aa22.52■■□□□ 1.2
MRPL28-205ENST00000447696 MED27Q6P2C8 311 aa22.52■■□□□ 1.2
MRPL28-205ENST00000447696 TRMT10CQ7L0Y3 403 aaKnown RBP22.52■■□□□ 1.2
MRPL28-205ENST00000447696 SRFBP1Q8NEF9 429 aaKnown RBP22.52■■□□□ 1.2
MRPL28-205ENST00000447696 DCAKDQ8WVC6 231 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms