RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 MFAP5Q13361 173 aa22.61■■□□□ 1.21
CPNE1-217ENST00000439669 BTBD16Q32M84 506 aa22.61■■□□□ 1.21
CPNE1-217ENST00000439669 PLEKHN1Q494U1 663 aaPredicted RBP22.61■■□□□ 1.21
CPNE1-217ENST00000439669 PRR30Q53SZ7 412 aaPredicted RBP22.61■■□□□ 1.21
CPNE1-217ENST00000439669 SFT2D3Q587I9 215 aa22.61■■□□□ 1.21
CPNE1-217ENST00000439669 PTGR2Q8N8N7 351 aaPredicted RBP22.61■■□□□ 1.21
CPNE1-217ENST00000439669 OR2L5Q8NG80 312 aa22.61■■□□□ 1.21
CPNE1-217ENST00000439669 PPP4R1Q8TF05 950 aa22.61■■□□□ 1.21
CPNE1-217ENST00000439669 CNDP1Q96KN2 507 aa22.61■■□□□ 1.21
CPNE1-217ENST00000439669 TXLNGYQ9BZA5 131 aa22.61■■□□□ 1.21
CPNE1-217ENST00000439669 COPS7BQ9H9Q2 264 aaPredicted RBP22.61■■□□□ 1.21
CPNE1-217ENST00000439669 TNPO3Q9Y5L0 923 aaKnown RBP22.61■■□□□ 1.21
CPNE1-217ENST00000439669 CSAG2Q9Y5P2 127 aa22.61■■□□□ 1.21
CPNE1-217ENST00000439669 B3GALT2O43825 422 aa22.6■■□□□ 1.21
CPNE1-217ENST00000439669 SIX3O95343 332 aaPredicted RBP22.6■■□□□ 1.21
CPNE1-217ENST00000439669 COL6A2P12110 1019 aa22.6■■□□□ 1.21
CPNE1-217ENST00000439669 OR4D2P58180 307 aa22.6■■□□□ 1.21
CPNE1-217ENST00000439669 E2F2Q14209 437 aa22.6■■□□□ 1.21
CPNE1-217ENST00000439669 SLC29A2Q14542 456 aa22.6■■□□□ 1.21
CPNE1-217ENST00000439669 PCBP2Q15366 365 aaKnown RBP eCLIP22.6■■□□□ 1.212e-7■■□□□ 12.7
CPNE1-217ENST00000439669 INPP5JQ15735 1006 aaPredicted RBP22.6■■□□□ 1.21
CPNE1-217ENST00000439669 ADPRMQ3LIE5 342 aa22.6■■□□□ 1.21
CPNE1-217ENST00000439669 GRHL2Q6ISB3 625 aa22.6■■□□□ 1.21
CPNE1-217ENST00000439669 PAPD4Q6PIY7 484 aaKnown RBP22.6■■□□□ 1.21
CPNE1-217ENST00000439669 IGFL2Q6UWQ7 119 aa22.6■■□□□ 1.21
CPNE1-217ENST00000439669 Q6ZS92 163 aa22.6■■□□□ 1.21
CPNE1-217ENST00000439669 ATCAYQ86WG3 371 aa22.6■■□□□ 1.21
CPNE1-217ENST00000439669 IQCKQ8N0W5 287 aa22.6■■□□□ 1.21
CPNE1-217ENST00000439669 AMER2Q8N7J2 671 aa22.6■■□□□ 1.21
CPNE1-217ENST00000439669 PSMF1Q92530 271 aa22.6■■□□□ 1.21
CPNE1-217ENST00000439669 MAGEB10Q96LZ2 347 aaPredicted RBP22.6■■□□□ 1.21
CPNE1-217ENST00000439669 PTCHD1Q96NR3 888 aa22.6■■□□□ 1.21
CPNE1-217ENST00000439669 F2RL3Q96RI0 385 aa22.6■■□□□ 1.21
CPNE1-217ENST00000439669 ACTR8Q9H981 624 aa22.6■■□□□ 1.21
CPNE1-217ENST00000439669 FAM227AF5H4B4 570 aa22.59■■□□□ 1.21
CPNE1-217ENST00000439669 PRMT3O60678 531 aa22.59■■□□□ 1.21
CPNE1-217ENST00000439669 SMIM24O75264 130 aa22.59■■□□□ 1.21
CPNE1-217ENST00000439669 TBX6O95947 436 aaPredicted RBP22.59■■□□□ 1.21
CPNE1-217ENST00000439669 GCAP28676 217 aa22.59■■□□□ 1.21
CPNE1-217ENST00000439669 PIK3CGP48736 1102 aa22.59■■□□□ 1.21
CPNE1-217ENST00000439669 BTG2P78543 158 aa22.59■■□□□ 1.21
CPNE1-217ENST00000439669 DDX39BQ13838 428 aaKnown RBP22.59■■□□□ 1.21
CPNE1-217ENST00000439669 GTF2H2Q13888 395 aa22.59■■□□□ 1.21
CPNE1-217ENST00000439669 GTF2H2CQ6P1K8 395 aa22.59■■□□□ 1.21
CPNE1-217ENST00000439669 ABHD17CQ6PCB6 329 aa22.59■■□□□ 1.21
CPNE1-217ENST00000439669 ADGRD1Q6QNK2 874 aa22.59■■□□□ 1.21
CPNE1-217ENST00000439669 QSOX2Q6ZRP7 698 aa22.59■■□□□ 1.21
CPNE1-217ENST00000439669 GOLGA7Q7Z5G4 137 aa22.59■■□□□ 1.21
CPNE1-217ENST00000439669 LAS2Q8IYD9 372 aa22.59■■□□□ 1.21
CPNE1-217ENST00000439669 DNAJB14Q8TBM8 379 aa22.59■■□□□ 1.21
CPNE1-217ENST00000439669 ZNF473Q8WTR7 871 aaKnown RBP22.59■■□□□ 1.21
CPNE1-217ENST00000439669 MTBPQ96DY7 904 aa22.59■■□□□ 1.21
CPNE1-217ENST00000439669 PHF21BQ96EK2 531 aa22.59■■□□□ 1.21
CPNE1-217ENST00000439669 QRFPRQ96P65 431 aa22.59■■□□□ 1.21
CPNE1-217ENST00000439669 LMF1Q96S06 567 aa22.59■■□□□ 1.21
CPNE1-217ENST00000439669 LPAR4Q99677 370 aa22.59■■□□□ 1.21
CPNE1-217ENST00000439669 NPLQ9BXD5 320 aaPredicted RBP22.59■■□□□ 1.21
CPNE1-217ENST00000439669 MS4A8Q9BY19 250 aa22.59■■□□□ 1.21
CPNE1-217ENST00000439669 TMCO1Q9UM00 188 aa22.59■■□□□ 1.21
CPNE1-217ENST00000439669 SH3BGRLO75368 114 aa22.58■■□□□ 1.21
CPNE1-217ENST00000439669 MYBL2P10244 700 aa22.58■■□□□ 1.21
CPNE1-217ENST00000439669 MAOAP21397 527 aa22.58■■□□□ 1.21
CPNE1-217ENST00000439669 CERS1P27544 350 aa22.58■■□□□ 1.21
CPNE1-217ENST00000439669 EEF1DP29692 281 aaKnown RBP22.58■■□□□ 1.21
CPNE1-217ENST00000439669 SOX11P35716 441 aa22.58■■□□□ 1.21
CPNE1-217ENST00000439669 ARL1P40616 181 aaPredicted RBP22.58■■□□□ 1.21
CPNE1-217ENST00000439669 MTTPP55157 894 aa22.58■■□□□ 1.21
CPNE1-217ENST00000439669 ARG2P78540 354 aa22.58■■□□□ 1.21
CPNE1-217ENST00000439669 PCDH1Q08174 1060 aa22.58■■□□□ 1.21
CPNE1-217ENST00000439669 RUNX2Q13950 521 aa22.58■■□□□ 1.21
CPNE1-217ENST00000439669 EXT1Q16394 746 aa22.58■■□□□ 1.21
CPNE1-217ENST00000439669 B3GNTL1Q67FW5 361 aaPredicted RBP22.58■■□□□ 1.21
CPNE1-217ENST00000439669 PLAG1Q6DJT9 500 aa22.58■■□□□ 1.21
CPNE1-217ENST00000439669 CUZD1Q86UP6 607 aa22.58■■□□□ 1.21
CPNE1-217ENST00000439669 CYP4X1Q8N118 509 aa22.58■■□□□ 1.21
CPNE1-217ENST00000439669 EIF1ADQ8N9N8 165 aaKnown RBP22.58■■□□□ 1.21
CPNE1-217ENST00000439669 OR7G3Q8NG95 312 aa22.58■■□□□ 1.21
CPNE1-217ENST00000439669 SERINC2Q96SA4 455 aa22.58■■□□□ 1.21
CPNE1-217ENST00000439669 PRDM9Q9NQV7 894 aa22.58■■□□□ 1.21
CPNE1-217ENST00000439669 SCN2AQ99250 2005 aa22.58■■□□□ 1.2
CPNE1-217ENST00000439669 DYTNA2CJ06 578 aa22.57■■□□□ 1.2
CPNE1-217ENST00000439669 E2F3O00716 465 aa22.57■■□□□ 1.2
CPNE1-217ENST00000439669 VPS4BO75351 444 aa22.57■■□□□ 1.2
CPNE1-217ENST00000439669 SERPINB1P30740 379 aa22.57■■□□□ 1.2
CPNE1-217ENST00000439669 RAB38P57729 211 aa22.57■■□□□ 1.2
CPNE1-217ENST00000439669 SRFBP1Q8NEF9 429 aaKnown RBP22.57■■□□□ 1.2
CPNE1-217ENST00000439669 ARMC2Q8NEN0 867 aa22.57■■□□□ 1.2
CPNE1-217ENST00000439669 KCNC2Q96PR1 638 aa22.57■■□□□ 1.2
CPNE1-217ENST00000439669 MRPL57Q9BQC6 102 aaKnown RBP22.57■■□□□ 1.2
CPNE1-217ENST00000439669 MRPL46Q9H2W6 279 aaKnown RBP22.57■■□□□ 1.2
CPNE1-217ENST00000439669 EPB41L4BQ9H329 900 aa22.57■■□□□ 1.2
CPNE1-217ENST00000439669 IPPKQ9H8X2 491 aa22.57■■□□□ 1.2
CPNE1-217ENST00000439669 PSMC3IPQ9P2W1 217 aaPredicted RBP22.57■■□□□ 1.2
CPNE1-217ENST00000439669 VPS4AQ9UN37 437 aa22.57■■□□□ 1.2
CPNE1-217ENST00000439669 IQANK1A0A1B0GTG1 560 aa22.56■■□□□ 1.2
CPNE1-217ENST00000439669 A8MUI8 341 aa22.56■■□□□ 1.2
CPNE1-217ENST00000439669 TGFB1P01137 390 aa22.56■■□□□ 1.2
CPNE1-217ENST00000439669 TMEM35AQ53FP2 167 aa22.56■■□□□ 1.2
CPNE1-217ENST00000439669 ABHD17BQ5VST6 288 aa22.56■■□□□ 1.2
CPNE1-217ENST00000439669 LIPJQ5W064 366 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms