RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 CATP04040 527 aaKnown RBP9.55□□□□□ -0.88
ATG4B-212ENST00000430617 CHRNGP07510 517 aa9.55□□□□□ -0.88
ATG4B-212ENST00000430617 SLC35G4P0C7Q5 338 aa9.55□□□□□ -0.88
ATG4B-212ENST00000430617 NCF1P14598 390 aaPredicted RBP9.55□□□□□ -0.88
ATG4B-212ENST00000430617 IMPDH1P20839 514 aa9.55□□□□□ -0.88
ATG4B-212ENST00000430617 IDSP22304 550 aa9.55□□□□□ -0.88
ATG4B-212ENST00000430617 SERPINB5P36952 375 aa9.55□□□□□ -0.88
ATG4B-212ENST00000430617 SLC6A12P48065 614 aa9.55□□□□□ -0.88
ATG4B-212ENST00000430617 AGTR2P50052 363 aa9.55□□□□□ -0.88
ATG4B-212ENST00000430617 TNFSF10P50591 281 aa9.55□□□□□ -0.88
ATG4B-212ENST00000430617 NAGLUP54802 743 aa9.55□□□□□ -0.88
ATG4B-212ENST00000430617 AP1S2P56377 157 aa9.55□□□□□ -0.88
ATG4B-212ENST00000430617 ABCE1P61221 599 aaKnown RBP9.55□□□□□ -0.88
ATG4B-212ENST00000430617 ASPHQ12797 758 aa9.55□□□□□ -0.88
ATG4B-212ENST00000430617 STX3Q13277 289 aa9.55□□□□□ -0.88
ATG4B-212ENST00000430617 MFAP5Q13361 173 aa9.55□□□□□ -0.88
ATG4B-212ENST00000430617 GRB7Q14451 532 aa9.55□□□□□ -0.88
ATG4B-212ENST00000430617 PCBP2Q15366 365 aaKnown RBP eCLIP9.55□□□□□ -0.882e-6■■■■□ 21.9
ATG4B-212ENST00000430617 RPE65Q16518 533 aa9.55□□□□□ -0.88
ATG4B-212ENST00000430617 CCSMST1Q4G0I0 132 aa9.55□□□□□ -0.88
ATG4B-212ENST00000430617 UNC50Q53HI1 259 aa9.55□□□□□ -0.88
ATG4B-212ENST00000430617 MRPL14Q6P1L8 145 aaKnown RBP9.55□□□□□ -0.88
ATG4B-212ENST00000430617 KLHL35Q6PF15 583 aa9.55□□□□□ -0.88
ATG4B-212ENST00000430617 ISLR2Q6UXK2 745 aa9.55□□□□□ -0.88
ATG4B-212ENST00000430617 KLHDC8AQ8IYD2 350 aa9.55□□□□□ -0.88
ATG4B-212ENST00000430617 SPDYE1Q8NFV5 336 aaPredicted RBP9.55□□□□□ -0.88
ATG4B-212ENST00000430617 DNAJB8Q8NHS0 232 aa9.55□□□□□ -0.88
ATG4B-212ENST00000430617 NUDT8Q8WV74 236 aa9.55□□□□□ -0.88
ATG4B-212ENST00000430617 SREK1Q8WXA9 508 aaKnown RBP9.55□□□□□ -0.88
ATG4B-212ENST00000430617 RHBDF1Q96CC6 855 aa9.55□□□□□ -0.88
ATG4B-212ENST00000430617 PHF21BQ96EK2 531 aa9.55□□□□□ -0.88
ATG4B-212ENST00000430617 THOC3Q96J01 351 aaKnown RBP9.55□□□□□ -0.88
ATG4B-212ENST00000430617 MESP1Q9BRJ9 268 aa9.55□□□□□ -0.88
ATG4B-212ENST00000430617 PITPNM3Q9BZ71 974 aa9.55□□□□□ -0.88
ATG4B-212ENST00000430617 LHPPQ9H008 270 aa9.55□□□□□ -0.88
ATG4B-212ENST00000430617 WWP1Q9H0M0 922 aa9.55□□□□□ -0.88
ATG4B-212ENST00000430617 PARVBQ9HBI1 364 aa9.55□□□□□ -0.88
ATG4B-212ENST00000430617 NPDC1Q9NQX5 325 aaPredicted RBP9.55□□□□□ -0.88
ATG4B-212ENST00000430617 CD274Q9NZQ7 290 aa9.55□□□□□ -0.88
ATG4B-212ENST00000430617 ABI3Q9P2A4 366 aa9.55□□□□□ -0.88
ATG4B-212ENST00000430617 GPN3Q9UHW5 284 aaPredicted RBP9.55□□□□□ -0.88
ATG4B-212ENST00000430617 PTBP2Q9UKA9 531 aaKnown RBP9.55□□□□□ -0.88
ATG4B-212ENST00000430617 PCTPQ9UKL6 214 aa9.55□□□□□ -0.88
ATG4B-212ENST00000430617 ACSL5Q9ULC5 683 aa9.55□□□□□ -0.88
ATG4B-212ENST00000430617 PSMD13Q9UNM6 376 aa9.55□□□□□ -0.88
ATG4B-212ENST00000430617 MPDZO75970 2070 aa9.54□□□□□ -0.88
ATG4B-212ENST00000430617 OR6C74A6NCV1 312 aa9.54□□□□□ -0.88
ATG4B-212ENST00000430617 E7EQ34 232 aa9.54□□□□□ -0.88
ATG4B-212ENST00000430617 HCRTR1O43613 425 aa9.54□□□□□ -0.88
ATG4B-212ENST00000430617 FAM107AO95990 144 aa9.54□□□□□ -0.88
ATG4B-212ENST00000430617 F10P00742 488 aa9.54□□□□□ -0.88
ATG4B-212ENST00000430617 S100BP04271 92 aaPredicted RBP9.54□□□□□ -0.88
ATG4B-212ENST00000430617 VIMP08670 466 aaKnown RBP9.54□□□□□ -0.88
ATG4B-212ENST00000430617 ERGP11308 486 aa9.54□□□□□ -0.88
ATG4B-212ENST00000430617 NEFHP12036 1026 aa9.54□□□□□ -0.88
ATG4B-212ENST00000430617 ST6GAL1P15907 406 aa9.54□□□□□ -0.88
ATG4B-212ENST00000430617 EEF1DP29692 281 aaKnown RBP9.54□□□□□ -0.88
ATG4B-212ENST00000430617 GGT5P36269 586 aa9.54□□□□□ -0.88
ATG4B-212ENST00000430617 SLC1A6P48664 564 aa9.54□□□□□ -0.88
ATG4B-212ENST00000430617 MEOX1P50221 254 aa9.54□□□□□ -0.88
ATG4B-212ENST00000430617 CASP6P55212 293 aa9.54□□□□□ -0.88
ATG4B-212ENST00000430617 PMP22Q01453 160 aa9.54□□□□□ -0.88
ATG4B-212ENST00000430617 FOLH1Q04609 750 aa9.54□□□□□ -0.88
ATG4B-212ENST00000430617 GALNT1Q10472 559 aaPredicted RBP9.54□□□□□ -0.88
ATG4B-212ENST00000430617 TERF2Q15554 542 aa9.54□□□□□ -0.88
ATG4B-212ENST00000430617 INAQ16352 499 aa9.54□□□□□ -0.88
ATG4B-212ENST00000430617 C18orf21Q32NC0 220 aaPredicted RBP9.54□□□□□ -0.88
ATG4B-212ENST00000430617 SULT1C3Q6IMI6 304 aa9.54□□□□□ -0.88
ATG4B-212ENST00000430617 METTL2BQ6P1Q9 378 aaKnown RBP9.54□□□□□ -0.88
ATG4B-212ENST00000430617 KIRREL2Q6UWL6 708 aa9.54□□□□□ -0.88
ATG4B-212ENST00000430617 CLEC9AQ6UXN8 241 aa9.54□□□□□ -0.88
ATG4B-212ENST00000430617 RPS27LQ71UM5 84 aaKnown RBP9.54□□□□□ -0.88
ATG4B-212ENST00000430617 DCUN1D3Q8IWE4 304 aa9.54□□□□□ -0.88
ATG4B-212ENST00000430617 TCAIMQ8N3R3 496 aa9.54□□□□□ -0.88
ATG4B-212ENST00000430617 WFDC11Q8NEX6 87 aa9.54□□□□□ -0.88
ATG4B-212ENST00000430617 PPP1R14CQ8TAE6 165 aa9.54□□□□□ -0.88
ATG4B-212ENST00000430617 SKA2Q8WVK7 121 aaPredicted RBP9.54□□□□□ -0.88
ATG4B-212ENST00000430617 NINJ1Q92982 152 aa9.54□□□□□ -0.88
ATG4B-212ENST00000430617 FBXL8Q96CD0 374 aa9.54□□□□□ -0.88
ATG4B-212ENST00000430617 NSUN5Q96P11 429 aaKnown RBP9.54□□□□□ -0.88
ATG4B-212ENST00000430617 LMF1Q96S06 567 aa9.54□□□□□ -0.88
ATG4B-212ENST00000430617 TRMOQ9BU70 441 aa9.54□□□□□ -0.88
ATG4B-212ENST00000430617 MENTQ9BUN1 341 aa9.54□□□□□ -0.88
ATG4B-212ENST00000430617 NSRP1Q9H0G5 558 aaKnown RBP9.54□□□□□ -0.88
ATG4B-212ENST00000430617 KLHL25Q9H0H3 589 aa9.54□□□□□ -0.88
ATG4B-212ENST00000430617 THAP1Q9NVV9 213 aa9.54□□□□□ -0.88
ATG4B-212ENST00000430617 ARL15Q9NXU5 204 aa9.54□□□□□ -0.88
ATG4B-212ENST00000430617 IFT80Q9P2H3 777 aaPredicted RBP9.54□□□□□ -0.88
ATG4B-212ENST00000430617 ST6GALNAC2Q9UJ37 374 aa9.54□□□□□ -0.88
ATG4B-212ENST00000430617 SERTAD3Q9UJW9 196 aa9.54□□□□□ -0.88
ATG4B-212ENST00000430617 ZNF835Q9Y2P0 537 aa9.54□□□□□ -0.88
ATG4B-212ENST00000430617 CFAP20Q9Y6A4 193 aaKnown RBP9.54□□□□□ -0.88
ATG4B-212ENST00000430617 DNAJC13O75165 2243 aa9.54□□□□□ -0.88
ATG4B-212ENST00000430617 H3BMH7 237 aa9.53□□□□□ -0.88
ATG4B-212ENST00000430617 UBFD1O14562 309 aaKnown RBP9.53□□□□□ -0.88
ATG4B-212ENST00000430617 SNUPNO95149 360 aaKnown RBP9.53□□□□□ -0.88
ATG4B-212ENST00000430617 HSPA4LO95757 839 aa9.53□□□□□ -0.88
ATG4B-212ENST00000430617 GUCA1CO95843 209 aa9.53□□□□□ -0.88
ATG4B-212ENST00000430617 CTSBP07858 339 aa9.53□□□□□ -0.88
ATG4B-212ENST00000430617 ANXA5P08758 320 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms