RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 SLC25A12O75746 678 aa14.51□□□□□ -0.09
SEC13-210ENST00000428626 WDR47O94967 919 aa14.51□□□□□ -0.09
SEC13-210ENST00000428626 RNH1P13489 461 aaKnown RBP14.51□□□□□ -0.09
SEC13-210ENST00000428626 NME2P22392 152 aa14.51□□□□□ -0.09
SEC13-210ENST00000428626 HTR1EP28566 365 aa14.51□□□□□ -0.09
SEC13-210ENST00000428626 GMPRP36959 345 aa14.51□□□□□ -0.09
SEC13-210ENST00000428626 TAS2R50P59544 299 aa14.51□□□□□ -0.09
SEC13-210ENST00000428626 BTN3A2P78410 334 aa14.51□□□□□ -0.09
SEC13-210ENST00000428626 SLBPQ14493 270 aaKnown RBP eCLIP14.51□□□□□ -0.09
SEC13-210ENST00000428626 MAPKAPK3Q16644 382 aa14.51□□□□□ -0.09
SEC13-210ENST00000428626 ZNF630Q2M218 657 aaPredicted RBP14.51□□□□□ -0.09
SEC13-210ENST00000428626 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.51□□□□□ -0.09
SEC13-210ENST00000428626 BNC2Q6ZN30 1099 aaPredicted RBP14.51□□□□□ -0.09
SEC13-210ENST00000428626 CAPN12Q6ZSI9 719 aa14.51□□□□□ -0.09
SEC13-210ENST00000428626 SPPL2CQ8IUH8 684 aa14.51□□□□□ -0.09
SEC13-210ENST00000428626 ARMC10Q8N2F6 343 aa14.51□□□□□ -0.09
SEC13-210ENST00000428626 TBC1D19Q8N5T2 526 aa14.51□□□□□ -0.09
SEC13-210ENST00000428626 TMEM178AQ8NBL3 297 aa14.51□□□□□ -0.09
SEC13-210ENST00000428626 ESAMQ96AP7 390 aa14.51□□□□□ -0.09
SEC13-210ENST00000428626 VPS39Q96JC1 886 aa14.51□□□□□ -0.09
SEC13-210ENST00000428626 EGFL8Q99944 293 aa14.51□□□□□ -0.09
SEC13-210ENST00000428626 TMEM79Q9BSE2 394 aa14.51□□□□□ -0.09
SEC13-210ENST00000428626 RHOJQ9H4E5 214 aa14.51□□□□□ -0.09
SEC13-210ENST00000428626 CAB39LQ9H9S4 337 aa14.51□□□□□ -0.09
SEC13-210ENST00000428626 GRPEL1Q9HAV7 217 aa14.51□□□□□ -0.09
SEC13-210ENST00000428626 PRDM9Q9NQV7 894 aa14.51□□□□□ -0.09
SEC13-210ENST00000428626 CTNNAL1Q9UBT7 734 aa14.51□□□□□ -0.09
SEC13-210ENST00000428626 ADGRG4Q8IZF6 3080 aa14.5□□□□□ -0.09
SEC13-210ENST00000428626 TACC2O95359 2948 aa14.5□□□□□ -0.09
SEC13-210ENST00000428626 NCF1BA6NI72 391 aaPredicted RBP14.5□□□□□ -0.09
SEC13-210ENST00000428626 ENO4A6NNW6 628 aa14.5□□□□□ -0.09
SEC13-210ENST00000428626 NCF1CA8MVU1 366 aaPredicted RBP14.5□□□□□ -0.09
SEC13-210ENST00000428626 C19orf84I3L1E1 186 aa14.5□□□□□ -0.09
SEC13-210ENST00000428626 ASNA1O43681 348 aa14.5□□□□□ -0.09
SEC13-210ENST00000428626 PRKNO60260 465 aaPredicted RBP14.5□□□□□ -0.09
SEC13-210ENST00000428626 SNRPB2P08579 225 aaKnown RBP14.5□□□□□ -0.09
SEC13-210ENST00000428626 C1GALT1C1LP0DN25 315 aa14.5□□□□□ -0.09
SEC13-210ENST00000428626 NCF1P14598 390 aaPredicted RBP14.5□□□□□ -0.09
SEC13-210ENST00000428626 TRHRP34981 398 aaPredicted RBP14.5□□□□□ -0.09
SEC13-210ENST00000428626 GPR143P51810 404 aa14.5□□□□□ -0.09
SEC13-210ENST00000428626 GNG11P61952 73 aa14.5□□□□□ -0.09
SEC13-210ENST00000428626 SKP1P63208 163 aa14.5□□□□□ -0.09
SEC13-210ENST00000428626 RBPJQ06330 500 aa14.5□□□□□ -0.09
SEC13-210ENST00000428626 CBLBQ13191 982 aa14.5□□□□□ -0.09
SEC13-210ENST00000428626 KRTCAP3Q53RY4 240 aa14.5□□□□□ -0.09
SEC13-210ENST00000428626 NIPAL1Q6NVV3 410 aa14.5□□□□□ -0.09
SEC13-210ENST00000428626 SCUBE1Q8IWY4 988 aa14.5□□□□□ -0.09
SEC13-210ENST00000428626 MS4A6EQ96DS6 147 aa14.5□□□□□ -0.09
SEC13-210ENST00000428626 PDLIM2Q96JY6 352 aa14.5□□□□□ -0.09
SEC13-210ENST00000428626 QRFPRQ96P65 431 aa14.5□□□□□ -0.09
SEC13-210ENST00000428626 PHF12Q96QT6 1004 aa14.5□□□□□ -0.09
SEC13-210ENST00000428626 CLK4Q9HAZ1 481 aaKnown RBP14.5□□□□□ -0.09
SEC13-210ENST00000428626 GPAMQ9HCL2 828 aa14.5□□□□□ -0.09
SEC13-210ENST00000428626 ASB1Q9Y576 335 aa14.5□□□□□ -0.09
SEC13-210ENST00000428626 LRIT2A6NDA9 550 aa14.49□□□□□ -0.09
SEC13-210ENST00000428626 EFCAB8A8MWE9 144 aa14.49□□□□□ -0.09
SEC13-210ENST00000428626 ADAM10O14672 748 aa14.49□□□□□ -0.09
SEC13-210ENST00000428626 PHGDHO43175 533 aaKnown RBP14.49□□□□□ -0.09
SEC13-210ENST00000428626 C1QAP02745 245 aa14.49□□□□□ -0.09
SEC13-210ENST00000428626 CD22P20273 847 aa14.49□□□□□ -0.09
SEC13-210ENST00000428626 SSTR1P30872 391 aa14.49□□□□□ -0.09
SEC13-210ENST00000428626 RFC3P40938 356 aa14.49□□□□□ -0.09
SEC13-210ENST00000428626 HNMTP50135 292 aa14.49□□□□□ -0.09
SEC13-210ENST00000428626 HLCSP50747 726 aa14.49□□□□□ -0.09
SEC13-210ENST00000428626 NR0B1P51843 470 aaKnown RBP14.49□□□□□ -0.09
SEC13-210ENST00000428626 TGFBIQ15582 683 aa14.49□□□□□ -0.09
SEC13-210ENST00000428626 TMIGD1Q6UXZ0 262 aa14.49□□□□□ -0.09
SEC13-210ENST00000428626 RPTNQ6XPR3 784 aa14.49□□□□□ -0.09
SEC13-210ENST00000428626 C3P1Q6ZMU1 363 aa14.49□□□□□ -0.09
SEC13-210ENST00000428626 C16orf47Q6ZP98 133 aaPredicted RBP14.49□□□□□ -0.09
SEC13-210ENST00000428626 ADAMTSL2Q86TH1 951 aa14.49□□□□□ -0.09
SEC13-210ENST00000428626 ZBED8Q8IZ13 594 aa14.49□□□□□ -0.09
SEC13-210ENST00000428626 MAGED4Q96JG8 741 aa14.49□□□□□ -0.09
SEC13-210ENST00000428626 KRT12Q99456 494 aa14.49□□□□□ -0.09
SEC13-210ENST00000428626 ZNF490Q9ULM2 529 aaPredicted RBP14.49□□□□□ -0.09
SEC13-210ENST00000428626 MEMO1Q9Y316 297 aa14.49□□□□□ -0.09
SEC13-210ENST00000428626 SAR1BQ9Y6B6 198 aa14.49□□□□□ -0.09
SEC13-210ENST00000428626 ZNF407Q9C0G0 2248 aa14.49□□□□□ -0.09
SEC13-210ENST00000428626 CCDC168Q8NDH2 2452 aa14.48□□□□□ -0.09
SEC13-210ENST00000428626 TRBV11-1A0A0K0K1C0 115 aa14.48□□□□□ -0.09
SEC13-210ENST00000428626 MYOCOSA0A1B0GUC4 107 aa14.48□□□□□ -0.09
SEC13-210ENST00000428626 URADA6NGE7 173 aa14.48□□□□□ -0.09
SEC13-210ENST00000428626 TMEM200CA6NKL6 621 aa14.48□□□□□ -0.09
SEC13-210ENST00000428626 PSMD12O00232 456 aaPredicted RBP14.48□□□□□ -0.09
SEC13-210ENST00000428626 ERI3O43414 337 aaKnown RBP14.48□□□□□ -0.09
SEC13-210ENST00000428626 MYO1DO94832 1006 aa14.48□□□□□ -0.09
SEC13-210ENST00000428626 GNAZP19086 355 aa14.48□□□□□ -0.09
SEC13-210ENST00000428626 EPORP19235 508 aa14.48□□□□□ -0.09
SEC13-210ENST00000428626 PTGER1P34995 402 aa14.48□□□□□ -0.09
SEC13-210ENST00000428626 KCNC1P48547 511 aa14.48□□□□□ -0.09
SEC13-210ENST00000428626 CYB561P49447 251 aa14.48□□□□□ -0.09
SEC13-210ENST00000428626 OR4D1Q15615 310 aa14.48□□□□□ -0.09
SEC13-210ENST00000428626 ADPRMQ3LIE5 342 aa14.48□□□□□ -0.09
SEC13-210ENST00000428626 MTFR2Q6P444 385 aa14.48□□□□□ -0.09
SEC13-210ENST00000428626 MDGA2Q7Z553 956 aa14.48□□□□□ -0.09
SEC13-210ENST00000428626 DOLPP1Q86YN1 238 aa14.48□□□□□ -0.09
SEC13-210ENST00000428626 HORMAD2Q8N7B1 307 aa14.48□□□□□ -0.09
SEC13-210ENST00000428626 FAM47BQ8NA70 645 aa14.48□□□□□ -0.09
SEC13-210ENST00000428626 B3GNT7Q8NFL0 401 aa14.48□□□□□ -0.09
SEC13-210ENST00000428626 GAL3ST3Q96A11 431 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms