RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 KRT38O76015 456 aa18.03■□□□□ 0.48
UBXN4-202ENST00000415164 AHRP35869 848 aa18.03■□□□□ 0.48
UBXN4-202ENST00000415164 SSR4P51571 173 aa18.03■□□□□ 0.48
UBXN4-202ENST00000415164 BBS9Q3SYG4 887 aa18.03■□□□□ 0.48
UBXN4-202ENST00000415164 CMPK2Q5EBM0 449 aa18.03■□□□□ 0.48
UBXN4-202ENST00000415164 SPANXN3Q5MJ09 141 aa18.03■□□□□ 0.48
UBXN4-202ENST00000415164 HP1BP3Q5SSJ5 553 aaPredicted RBP18.03■□□□□ 0.48
UBXN4-202ENST00000415164 THOC6Q86W42 341 aaKnown RBP18.03■□□□□ 0.48
UBXN4-202ENST00000415164 MARVELD2Q8N4S9 558 aa18.03■□□□□ 0.48
UBXN4-202ENST00000415164 B3GNT7Q8NFL0 401 aa18.03■□□□□ 0.48
UBXN4-202ENST00000415164 OR52N2Q8NGI0 321 aa18.03■□□□□ 0.48
UBXN4-202ENST00000415164 ASB5Q8WWX0 329 aa18.03■□□□□ 0.48
UBXN4-202ENST00000415164 NCLNQ969V3 563 aa18.03■□□□□ 0.48
UBXN4-202ENST00000415164 CFAP36Q96G28 342 aa18.03■□□□□ 0.48
UBXN4-202ENST00000415164 EGFL8Q99944 293 aa18.03■□□□□ 0.48
UBXN4-202ENST00000415164 SARGQ9BW04 601 aa18.03■□□□□ 0.48
UBXN4-202ENST00000415164 TRIM45Q9H8W5 580 aaPredicted RBP18.03■□□□□ 0.48
UBXN4-202ENST00000415164 PELI2Q9HAT8 420 aa18.03■□□□□ 0.48
UBXN4-202ENST00000415164 TIMMDC1Q9NPL8 285 aa18.03■□□□□ 0.48
UBXN4-202ENST00000415164 RNF6Q9Y252 685 aa18.03■□□□□ 0.48
UBXN4-202ENST00000415164 IGKV3D-11A0A0A0MRZ8 115 aa18.02■□□□□ 0.48
UBXN4-202ENST00000415164 FAM166BA8MTA8 275 aa18.02■□□□□ 0.48
UBXN4-202ENST00000415164 C4orf51C9J302 202 aa18.02■□□□□ 0.48
UBXN4-202ENST00000415164 NRDCO43847 1150 aa18.02■□□□□ 0.48
UBXN4-202ENST00000415164 PPP2R1BP30154 601 aa18.02■□□□□ 0.48
UBXN4-202ENST00000415164 NXPE4Q6UWF7 544 aa18.02■□□□□ 0.48
UBXN4-202ENST00000415164 C16orf47Q6ZP98 133 aaPredicted RBP18.02■□□□□ 0.48
UBXN4-202ENST00000415164 STRA8Q7Z7C7 330 aa18.02■□□□□ 0.48
UBXN4-202ENST00000415164 CCDC71Q8IV32 467 aaPredicted RBP18.02■□□□□ 0.48
UBXN4-202ENST00000415164 RPRMLQ8N4K4 120 aa18.02■□□□□ 0.48
UBXN4-202ENST00000415164 APCDD1LQ8NCL9 501 aa18.02■□□□□ 0.48
UBXN4-202ENST00000415164 OR5M3Q8NGP4 307 aa18.02■□□□□ 0.48
UBXN4-202ENST00000415164 GRK7Q8WTQ7 553 aa18.02■□□□□ 0.48
UBXN4-202ENST00000415164 RND1Q92730 232 aa18.02■□□□□ 0.48
UBXN4-202ENST00000415164 CERS2Q96G23 380 aa18.02■□□□□ 0.48
UBXN4-202ENST00000415164 PBKQ96KB5 322 aa18.02■□□□□ 0.48
UBXN4-202ENST00000415164 SLC6A16Q9GZN6 736 aa18.02■□□□□ 0.48
UBXN4-202ENST00000415164 TP63Q9H3D4 680 aaPredicted RBP18.02■□□□□ 0.48
UBXN4-202ENST00000415164 ASIC3Q9UHC3 531 aa18.02■□□□□ 0.48
UBXN4-202ENST00000415164 IKZF3Q9UKT9 509 aa18.02■□□□□ 0.48
UBXN4-202ENST00000415164 SLC22A14Q9Y267 594 aa18.02■□□□□ 0.48
UBXN4-202ENST00000415164 HRH3Q9Y5N1 445 aa18.02■□□□□ 0.48
UBXN4-202ENST00000415164 HIVEP1P15822 2718 aa18.01■□□□□ 0.47
UBXN4-202ENST00000415164 NPEPPSL1A6NEC2 478 aa18.01■□□□□ 0.47
UBXN4-202ENST00000415164 A8MVJ9 347 aa18.01■□□□□ 0.47
UBXN4-202ENST00000415164 PGRMC1O00264 195 aaKnown RBP18.01■□□□□ 0.47
UBXN4-202ENST00000415164 TTC4O95801 387 aa18.01■□□□□ 0.47
UBXN4-202ENST00000415164 ENO2P09104 434 aaPredicted RBP18.01■□□□□ 0.47
UBXN4-202ENST00000415164 CHRNB4P30926 498 aa18.01■□□□□ 0.47
UBXN4-202ENST00000415164 SLC13A2Q13183 592 aa18.01■□□□□ 0.47
UBXN4-202ENST00000415164 TESK1Q15569 626 aa18.01■□□□□ 0.47
UBXN4-202ENST00000415164 RNASEH2BQ5TBB1 312 aaKnown RBP18.01■□□□□ 0.47
UBXN4-202ENST00000415164 FAM45BPQ6NSW5 357 aa18.01■□□□□ 0.47
UBXN4-202ENST00000415164 ARHGAP11AQ6P4F7 1023 aa18.01■□□□□ 0.47
UBXN4-202ENST00000415164 IL20RBQ6UXL0 311 aa18.01■□□□□ 0.47
UBXN4-202ENST00000415164 ZNF662Q6ZS27 426 aa18.01■□□□□ 0.47
UBXN4-202ENST00000415164 CLNKQ7Z7G1 428 aa18.01■□□□□ 0.47
UBXN4-202ENST00000415164 RASGEF1CQ8N431 466 aa18.01■□□□□ 0.47
UBXN4-202ENST00000415164 FAM47BQ8NA70 645 aa18.01■□□□□ 0.47
UBXN4-202ENST00000415164 OR10Q1Q8NGQ4 319 aa18.01■□□□□ 0.47
UBXN4-202ENST00000415164 FAM45AQ8TCE6 357 aa18.01■□□□□ 0.47
UBXN4-202ENST00000415164 VMP1Q96GC9 406 aa18.01■□□□□ 0.47
UBXN4-202ENST00000415164 NAP1L3Q99457 506 aaPredicted RBP18.01■□□□□ 0.47
UBXN4-202ENST00000415164 KCNJ16Q9NPI9 418 aa18.01■□□□□ 0.47
UBXN4-202ENST00000415164 PRTFDC1Q9NRG1 225 aa18.01■□□□□ 0.47
UBXN4-202ENST00000415164 HPF1Q9NWY4 346 aa18.01■□□□□ 0.47
UBXN4-202ENST00000415164 KCNE2Q9Y6J6 123 aa18.01■□□□□ 0.47
UBXN4-202ENST00000415164 GOLGA6L10A0A0M3HER8 536 aa18■□□□□ 0.47
UBXN4-202ENST00000415164 MYOCOSA0A1B0GUC4 107 aa18■□□□□ 0.47
UBXN4-202ENST00000415164 NPIPA2E9PIF3 369 aa18■□□□□ 0.47
UBXN4-202ENST00000415164 NPIPA3F8WFD2 350 aa18■□□□□ 0.47
UBXN4-202ENST00000415164 G3V3Y1 287 aa18■□□□□ 0.47
UBXN4-202ENST00000415164 TUBB4AP04350 444 aa18■□□□□ 0.47
UBXN4-202ENST00000415164 IFNA16P05015 189 aa18■□□□□ 0.47
UBXN4-202ENST00000415164 NR0B1P51843 470 aaKnown RBP18■□□□□ 0.47
UBXN4-202ENST00000415164 PPIAP62937 165 aaKnown RBP18■□□□□ 0.47
UBXN4-202ENST00000415164 PMPCAQ10713 525 aa18■□□□□ 0.47
UBXN4-202ENST00000415164 MYBPHQ13203 477 aa18■□□□□ 0.47
UBXN4-202ENST00000415164 BMPR2Q13873 1038 aa18■□□□□ 0.47
UBXN4-202ENST00000415164 MSS51Q4VC12 460 aa18■□□□□ 0.47
UBXN4-202ENST00000415164 PAOXQ6QHF9 649 aa18■□□□□ 0.47
UBXN4-202ENST00000415164 KIAA0408Q6ZU52 694 aa18■□□□□ 0.47
UBXN4-202ENST00000415164 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18■□□□□ 0.47
UBXN4-202ENST00000415164 OR5M9Q8NGP3 310 aa18■□□□□ 0.47
UBXN4-202ENST00000415164 ASB15Q8WXK1 588 aa18■□□□□ 0.47
UBXN4-202ENST00000415164 ZNF559Q9BR84 538 aa18■□□□□ 0.47
UBXN4-202ENST00000415164 CLK4Q9HAZ1 481 aaKnown RBP18■□□□□ 0.47
UBXN4-202ENST00000415164 VWA7Q9Y334 891 aa18■□□□□ 0.47
UBXN4-202ENST00000415164 MMACHCQ9Y4U1 282 aa18■□□□□ 0.47
UBXN4-202ENST00000415164 FOXO6A8MYZ6 492 aa17.99■□□□□ 0.47
UBXN4-202ENST00000415164 ACOT7O00154 380 aa17.99■□□□□ 0.47
UBXN4-202ENST00000415164 CDC7O00311 574 aa17.99■□□□□ 0.47
UBXN4-202ENST00000415164 ERI3O43414 337 aaKnown RBP17.99■□□□□ 0.47
UBXN4-202ENST00000415164 PRKNO60260 465 aaPredicted RBP17.99■□□□□ 0.47
UBXN4-202ENST00000415164 OR2J2O76002 312 aa17.99■□□□□ 0.47
UBXN4-202ENST00000415164 SERPINA6P08185 405 aa17.99■□□□□ 0.47
UBXN4-202ENST00000415164 SMIM10L1P0DMW3 83 aa17.99■□□□□ 0.47
UBXN4-202ENST00000415164 ART1P52961 327 aa17.99■□□□□ 0.47
UBXN4-202ENST00000415164 STXBP1P61764 594 aaKnown RBP17.99■□□□□ 0.47
UBXN4-202ENST00000415164 CCZ1BP86790 482 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms