RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 SPESP1Q6UW49 350 aa19.75■□□□□ 0.75
USP39-203ENST00000409470 EIF3MQ7L2H7 374 aaKnown RBP19.75■□□□□ 0.75
USP39-203ENST00000409470 OR2L3Q8NG85 312 aa19.75■□□□□ 0.75
USP39-203ENST00000409470 OR5AK3PQ8NH89 298 aa19.75■□□□□ 0.75
USP39-203ENST00000409470 LCN9Q8WX39 176 aa19.75■□□□□ 0.75
USP39-203ENST00000409470 ASPSCR1Q9BZE9 553 aa19.75■□□□□ 0.75
USP39-203ENST00000409470 YIPF3Q9GZM5 350 aa19.75■□□□□ 0.75
USP39-203ENST00000409470 SOX17Q9H6I2 414 aaPredicted RBP19.75■□□□□ 0.75
USP39-203ENST00000409470 SLC6A20Q9NP91 592 aa19.75■□□□□ 0.75
USP39-203ENST00000409470 LHX9Q9NQ69 397 aa19.75■□□□□ 0.75
USP39-203ENST00000409470 TMEM184CQ9NVA4 438 aa19.75■□□□□ 0.75
USP39-203ENST00000409470 SPHK1Q9NYA1 384 aa19.75■□□□□ 0.75
USP39-203ENST00000409470 ACSL6Q9UKU0 697 aa19.75■□□□□ 0.75
USP39-203ENST00000409470 ISM1B1AKI9 464 aa19.75■□□□□ 0.75
USP39-203ENST00000409470 H3BNH8 94 aa19.75■□□□□ 0.75
USP39-203ENST00000409470 PRICKLE3O43900 615 aaPredicted RBP19.75■□□□□ 0.75
USP39-203ENST00000409470 CLIC3O95833 236 aa19.75■□□□□ 0.75
USP39-203ENST00000409470 HPRP00739 348 aa19.75■□□□□ 0.75
USP39-203ENST00000409470 ETFAP13804 333 aa19.75■□□□□ 0.75
USP39-203ENST00000409470 NDUFS1P28331 727 aa19.75■□□□□ 0.75
USP39-203ENST00000409470 PCGF2P35227 344 aa19.75■□□□□ 0.75
USP39-203ENST00000409470 BCL6P41182 706 aa19.75■□□□□ 0.75
USP39-203ENST00000409470 PLA2G16P53816 162 aa19.75■□□□□ 0.75
USP39-203ENST00000409470 PPP1R8Q12972 351 aaKnown RBP19.75■□□□□ 0.75
USP39-203ENST00000409470 ZIK1Q3SY52 487 aaPredicted RBP19.75■□□□□ 0.75
USP39-203ENST00000409470 FAM180BQ6P0A1 224 aa19.75■□□□□ 0.75
USP39-203ENST00000409470 CBLL1Q75N03 491 aa19.75■□□□□ 0.75
USP39-203ENST00000409470 OR4E2Q8NGC2 313 aa19.75■□□□□ 0.75
USP39-203ENST00000409470 OR52N2Q8NGI0 321 aa19.75■□□□□ 0.75
USP39-203ENST00000409470 OR5K1Q8NHB7 308 aa19.75■□□□□ 0.75
USP39-203ENST00000409470 CCL4L1Q8NHW4 92 aa19.75■□□□□ 0.75
USP39-203ENST00000409470 CREB3L4Q8TEY5 395 aa19.75■□□□□ 0.75
USP39-203ENST00000409470 DPH7Q9BTV6 452 aa19.75■□□□□ 0.75
USP39-203ENST00000409470 TMEM168Q9H0V1 697 aa19.75■□□□□ 0.75
USP39-203ENST00000409470 IL1RAPQ9NPH3 570 aa19.75■□□□□ 0.75
USP39-203ENST00000409470 A0A0G2JN53 185 aa19.74■□□□□ 0.75
USP39-203ENST00000409470 A0A1B0GTW7 788 aa19.74■□□□□ 0.75
USP39-203ENST00000409470 SEC24DO94855 1032 aaPredicted RBP19.74■□□□□ 0.75
USP39-203ENST00000409470 THRBP10828 461 aa19.74■□□□□ 0.75
USP39-203ENST00000409470 DDX5P17844 614 aaKnown RBP19.74■□□□□ 0.75
USP39-203ENST00000409470 AQP1P29972 269 aa19.74■□□□□ 0.75
USP39-203ENST00000409470 CMPK1P30085 196 aa19.74■□□□□ 0.75
USP39-203ENST00000409470 PEBP1P30086 187 aaKnown RBP19.74■□□□□ 0.75
USP39-203ENST00000409470 SHMT2P34897 504 aa19.74■□□□□ 0.75
USP39-203ENST00000409470 MAGEA2P43356 314 aa19.74■□□□□ 0.75
USP39-203ENST00000409470 RPL5P46777 297 aaKnown RBP19.74■□□□□ 0.75
USP39-203ENST00000409470 MYBPC3Q14896 1274 aa19.74■□□□□ 0.75
USP39-203ENST00000409470 TEAD4Q15561 434 aa19.74■□□□□ 0.75
USP39-203ENST00000409470 OR4C11Q6IEV9 310 aa19.74■□□□□ 0.75
USP39-203ENST00000409470 TTC33Q6PID6 262 aaPredicted RBP19.74■□□□□ 0.75
USP39-203ENST00000409470 UBE3DQ7Z6J8 389 aa19.74■□□□□ 0.75
USP39-203ENST00000409470 VTCN1Q7Z7D3 282 aa19.74■□□□□ 0.75
USP39-203ENST00000409470 AMIGO1Q86WK6 493 aa19.74■□□□□ 0.75
USP39-203ENST00000409470 HS3ST5Q8IZT8 346 aa19.74■□□□□ 0.75
USP39-203ENST00000409470 FBXL6Q8N531 539 aa19.74■□□□□ 0.75
USP39-203ENST00000409470 TBC1D19Q8N5T2 526 aa19.74■□□□□ 0.75
USP39-203ENST00000409470 TSPAN14Q8NG11 270 aa19.74■□□□□ 0.75
USP39-203ENST00000409470 HSH2DQ96JZ2 352 aa19.74■□□□□ 0.75
USP39-203ENST00000409470 SMURF2Q9HAU4 748 aa19.74■□□□□ 0.75
USP39-203ENST00000409470 GPATCH2Q9NW75 528 aa19.74■□□□□ 0.75
USP39-203ENST00000409470 ADAM29Q9UKF5 820 aa19.74■□□□□ 0.75
USP39-203ENST00000409470 BAG5Q9UL15 447 aa19.74■□□□□ 0.75
USP39-203ENST00000409470 PADI4Q9UM07 663 aa19.74■□□□□ 0.75
USP39-203ENST00000409470 MAP4K5Q9Y4K4 846 aa19.74■□□□□ 0.75
USP39-203ENST00000409470 U3KQV3 271 aa19.74■□□□□ 0.75
USP39-203ENST00000409470 TRBV23OR9-2A0A075B6M9 112 aa19.73■□□□□ 0.75
USP39-203ENST00000409470 LRIT2A6NDA9 550 aa19.73■□□□□ 0.75
USP39-203ENST00000409470 SHISA7A6NL88 538 aa19.73■□□□□ 0.75
USP39-203ENST00000409470 TNFRSF10CO14798 259 aa19.73■□□□□ 0.75
USP39-203ENST00000409470 HAT1O14929 419 aa19.73■□□□□ 0.75
USP39-203ENST00000409470 STATHP02808 62 aa19.73■□□□□ 0.75
USP39-203ENST00000409470 SSR2P43308 183 aa19.73■□□□□ 0.75
USP39-203ENST00000409470 PRIM2P49643 509 aa19.73■□□□□ 0.75
USP39-203ENST00000409470 MVDP53602 400 aa19.73■□□□□ 0.75
USP39-203ENST00000409470 SRP54P61011 504 aaKnown RBP19.73■□□□□ 0.75
USP39-203ENST00000409470 GCNT6Q5T4J0 391 aa19.73■□□□□ 0.75
USP39-203ENST00000409470 TRIM40Q6P9F5 258 aa19.73■□□□□ 0.75
USP39-203ENST00000409470 WASH2PQ6VEQ5 465 aa19.73■□□□□ 0.75
USP39-203ENST00000409470 CHRDL2Q6WN34 429 aa19.73■□□□□ 0.75
USP39-203ENST00000409470 SATL1Q86VE3 508 aa19.73■□□□□ 0.75
USP39-203ENST00000409470 OFCC1Q8IZS5 231 aa19.73■□□□□ 0.75
USP39-203ENST00000409470 ZNF786Q8N393 782 aa19.73■□□□□ 0.75
USP39-203ENST00000409470 TPD52L3Q96J77 140 aa19.73■□□□□ 0.75
USP39-203ENST00000409470 RBM4BQ9BQ04 359 aaKnown RBP19.73■□□□□ 0.75
USP39-203ENST00000409470 C17orf62Q9BQA9 187 aa19.73■□□□□ 0.75
USP39-203ENST00000409470 RBM4Q9BWF3 364 aaKnown RBP19.73■□□□□ 0.75
USP39-203ENST00000409470 RAD21L1Q9H4I0 556 aa19.73■□□□□ 0.75
USP39-203ENST00000409470 CLK4Q9HAZ1 481 aaKnown RBP19.73■□□□□ 0.75
USP39-203ENST00000409470 EBF1Q9UH73 591 aa19.73■□□□□ 0.75
USP39-203ENST00000409470 SNX8Q9Y5X2 465 aa19.73■□□□□ 0.75
USP39-203ENST00000409470 MYO10Q9HD67 2058 aa19.73■□□□□ 0.75
USP39-203ENST00000409470 MBTPS2O43462 519 aa19.73■□□□□ 0.75
USP39-203ENST00000409470 TMPRSS11DO60235 418 aa19.73■□□□□ 0.75
USP39-203ENST00000409470 KRT75O95678 551 aa19.73■□□□□ 0.75
USP39-203ENST00000409470 FABP3P05413 133 aa19.73■□□□□ 0.75
USP39-203ENST00000409470 TFAP2AP05549 437 aa19.73■□□□□ 0.75
USP39-203ENST00000409470 POU3F3P20264 500 aaPredicted RBP19.73■□□□□ 0.75
USP39-203ENST00000409470 DCTP40126 519 aa19.73■□□□□ 0.75
USP39-203ENST00000409470 YPEL5P62699 121 aa19.73■□□□□ 0.75
USP39-203ENST00000409470 ADARB1P78563 741 aaKnown RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms