RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 GALNT10Q86SR1 603 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 PTOV1Q86YD1 416 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 OR5K1Q8NHB7 308 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 WDR34Q96EX3 536 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 TXNDC15Q96J42 360 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 DPH2Q9BQC3 489 aaPredicted RBP13.41□□□□□ -0.26
MSH5-202ENST00000375740 SFXN1Q9H9B4 322 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 EXO1Q9UQ84 846 aaKnown RBP13.41□□□□□ -0.26
MSH5-202ENST00000375740 U3KQV3 271 aa13.41□□□□□ -0.26
MSH5-202ENST00000375740 C1QTNF3-AMACRE9PGA6 284 aa13.4□□□□□ -0.26
MSH5-202ENST00000375740 PCDH7O60245 1069 aa13.4□□□□□ -0.26
MSH5-202ENST00000375740 TGFB1P01137 390 aa13.4□□□□□ -0.26
MSH5-202ENST00000375740 FCARP24071 287 aa13.4□□□□□ -0.26
MSH5-202ENST00000375740 PNLIPRP1P54315 467 aa13.4□□□□□ -0.26
MSH5-202ENST00000375740 EMX1Q04741 257 aaPredicted RBP13.4□□□□□ -0.26
MSH5-202ENST00000375740 CPZQ66K79 652 aa13.4□□□□□ -0.26
MSH5-202ENST00000375740 VITQ6UXI7 678 aa13.4□□□□□ -0.26
MSH5-202ENST00000375740 ZDHHC21Q8IVQ6 265 aa13.4□□□□□ -0.26
MSH5-202ENST00000375740 C8orf59Q8N0T1 100 aaPredicted RBP13.4□□□□□ -0.26
MSH5-202ENST00000375740 C2orf73Q8N5S3 287 aaPredicted RBP13.4□□□□□ -0.26
MSH5-202ENST00000375740 POP5Q969H6 163 aaKnown RBP13.4□□□□□ -0.26
MSH5-202ENST00000375740 COQ8BQ96D53 544 aa13.4□□□□□ -0.26
MSH5-202ENST00000375740 IL17FQ96PD4 163 aa13.4□□□□□ -0.26
MSH5-202ENST00000375740 MBOAT4Q96T53 435 aa13.4□□□□□ -0.26
MSH5-202ENST00000375740 ARPC5LQ9BPX5 153 aa13.4□□□□□ -0.26
MSH5-202ENST00000375740 SPNS1Q9H2V7 528 aa13.4□□□□□ -0.26
MSH5-202ENST00000375740 DPEP2Q9H4A9 486 aa13.4□□□□□ -0.26
MSH5-202ENST00000375740 TPT1P8Q9HAU6 139 aa13.4□□□□□ -0.26
MSH5-202ENST00000375740 FBXO8Q9NRD0 319 aa13.4□□□□□ -0.26
MSH5-202ENST00000375740 FAM118AQ9NWS6 357 aa13.4□□□□□ -0.26
MSH5-202ENST00000375740 SH3BP4Q9P0V3 963 aa13.4□□□□□ -0.26
MSH5-202ENST00000375740 SAMD4AQ9UPU9 718 aaKnown RBP13.4□□□□□ -0.26
MSH5-202ENST00000375740 SAP18O00422 153 aaKnown RBP13.4□□□□□ -0.26
MSH5-202ENST00000375740 GBAP04062 536 aa13.4□□□□□ -0.26
MSH5-202ENST00000375740 MAP2K4P45985 399 aa13.4□□□□□ -0.26
MSH5-202ENST00000375740 ERVK-21P61565 698 aa13.4□□□□□ -0.26
MSH5-202ENST00000375740 RBM48Q5RL73 367 aaKnown RBP13.4□□□□□ -0.26
MSH5-202ENST00000375740 HIST2H2AA3Q6FI13 130 aa13.4□□□□□ -0.26
MSH5-202ENST00000375740 NXPE4Q6UWF7 544 aa13.4□□□□□ -0.26
MSH5-202ENST00000375740 SPATC1Q76KD6 591 aa13.4□□□□□ -0.26
MSH5-202ENST00000375740 GPR155Q7Z3F1 870 aa13.4□□□□□ -0.26
MSH5-202ENST00000375740 ADCK1Q86TW2 530 aa13.4□□□□□ -0.26
MSH5-202ENST00000375740 LYSMD2Q8IV50 215 aa13.4□□□□□ -0.26
MSH5-202ENST00000375740 LAS2Q8IYD9 372 aa13.4□□□□□ -0.26
MSH5-202ENST00000375740 EID3Q8N140 333 aa13.4□□□□□ -0.26
MSH5-202ENST00000375740 SLC5A11Q8WWX8 675 aa13.4□□□□□ -0.26
MSH5-202ENST00000375740 RPL3LQ92901 407 aaKnown RBP13.4□□□□□ -0.26
MSH5-202ENST00000375740 RBM4BQ9BQ04 359 aaKnown RBP13.4□□□□□ -0.26
MSH5-202ENST00000375740 EFCAB11Q9BUY7 163 aa13.4□□□□□ -0.26
MSH5-202ENST00000375740 RBM4Q9BWF3 364 aaKnown RBP13.4□□□□□ -0.26
MSH5-202ENST00000375740 HDAC8Q9BY41 377 aa13.4□□□□□ -0.26
MSH5-202ENST00000375740 PRDM8Q9NQV8 689 aa13.4□□□□□ -0.26
MSH5-202ENST00000375740 USE1Q9NZ43 259 aa13.4□□□□□ -0.26
MSH5-202ENST00000375740 THAP10Q9P2Z0 257 aaPredicted RBP13.4□□□□□ -0.26
MSH5-202ENST00000375740 BTNL2Q9UIR0 455 aa13.4□□□□□ -0.26
MSH5-202ENST00000375740 PLAGL1Q9UM63 463 aa13.4□□□□□ -0.26
MSH5-202ENST00000375740 PIPSLA2A3N6 862 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 FOXE1O00358 373 aaPredicted RBP13.39□□□□□ -0.27
MSH5-202ENST00000375740 RGS13O14921 159 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 TBX1O43435 398 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 DLGAP3O95886 979 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 KDELR2P33947 212 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 GJA4P35212 333 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 C9orf50Q5SZB4 431 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 IER5LQ5T953 404 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 CACUL1Q86Y37 369 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 CHPFQ8IZ52 775 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 FAM83FQ8NEG4 500 aaPredicted RBP13.39□□□□□ -0.27
MSH5-202ENST00000375740 VPS37AQ8NEZ2 397 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 PJA1Q8NG27 643 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 FAR1Q8WVX9 515 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 HDAC2Q92769 488 aaKnown RBP13.39□□□□□ -0.27
MSH5-202ENST00000375740 RDH12Q96NR8 316 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 OR52A5Q9H2C5 316 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 OR51B5Q9H339 312 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 SLC23A2Q9UGH3 650 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 ASF1AQ9Y294 204 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 BOLA1Q9Y3E2 137 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 DENND4AQ7Z401 1863 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 IGLON5A6NGN9 336 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 ASNA1O43681 348 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 GABARAPO95166 117 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 WASP42768 502 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 TPD52P55327 224 aaPredicted RBP13.39□□□□□ -0.27
MSH5-202ENST00000375740 RUNX3Q13761 415 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 DGCR6Q14129 220 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 CCDC58Q4VC31 144 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 PIP5KL1Q5T9C9 394 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 ANXA8L1Q5VT79 327 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 TTC23Q5W5X9 447 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 DESI1Q6ICB0 168 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 PNCKQ6P2M8 343 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 ERICH5Q6P6B1 374 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 CAMKMTQ7Z624 323 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 PGBD3Q8N328 593 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 POC5Q8NA72 575 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 ZNF740Q8NDX6 193 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 OR7G1Q8NGA0 311 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 OR5AR1Q8NGP9 310 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 WDR48Q8TAF3 677 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms