RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 PIK3CBP42338 1070 aa14.4□□□□□ -0.1
UBE3B-201ENST00000340074 NEK2P51955 445 aa14.4□□□□□ -0.1
UBE3B-201ENST00000340074 RPS13P62277 151 aaKnown RBP14.4□□□□□ -0.1
UBE3B-201ENST00000340074 KCNAB2Q13303 367 aa14.4□□□□□ -0.1
UBE3B-201ENST00000340074 MINDY4Q4G0A6 757 aa14.4□□□□□ -0.1
UBE3B-201ENST00000340074 DCAF10Q5QP82 559 aa14.4□□□□□ -0.1
UBE3B-201ENST00000340074 CEP85LQ5SZL2 805 aa14.4□□□□□ -0.1
UBE3B-201ENST00000340074 FAAH2Q6GMR7 532 aa14.4□□□□□ -0.1
UBE3B-201ENST00000340074 LETMD1Q6P1Q0 360 aa14.4□□□□□ -0.1
UBE3B-201ENST00000340074 ABHD17CQ6PCB6 329 aa14.4□□□□□ -0.1
UBE3B-201ENST00000340074 MILR1Q7Z6M3 343 aa14.4□□□□□ -0.1
UBE3B-201ENST00000340074 TMEM102Q8N9M5 508 aaPredicted RBP14.4□□□□□ -0.1
UBE3B-201ENST00000340074 WDR20Q8TBZ3 569 aa14.4□□□□□ -0.1
UBE3B-201ENST00000340074 RDH11Q8TC12 318 aa14.4□□□□□ -0.1
UBE3B-201ENST00000340074 C8orf44Q96CB5 159 aa14.4□□□□□ -0.1
UBE3B-201ENST00000340074 REPS1Q96D71 796 aa14.4□□□□□ -0.1
UBE3B-201ENST00000340074 MTFMTQ96DP5 389 aaKnown RBP14.4□□□□□ -0.1
UBE3B-201ENST00000340074 CMTM7Q96FZ5 175 aa14.4□□□□□ -0.1
UBE3B-201ENST00000340074 FER1L6-AS2Q96M78 137 aa14.4□□□□□ -0.1
UBE3B-201ENST00000340074 QRFPRQ96P65 431 aa14.4□□□□□ -0.1
UBE3B-201ENST00000340074 VN1R1Q9GZP7 353 aa14.4□□□□□ -0.1
UBE3B-201ENST00000340074 IQCGQ9H095 443 aaKnown RBP14.4□□□□□ -0.1
UBE3B-201ENST00000340074 OR51B5Q9H339 312 aa14.4□□□□□ -0.1
UBE3B-201ENST00000340074 FBXL4Q9UKA2 621 aa14.4□□□□□ -0.1
UBE3B-201ENST00000340074 PLLPQ9Y342 182 aa14.4□□□□□ -0.1
UBE3B-201ENST00000340074 A0A088AWK7 358 aa14.39□□□□□ -0.11
UBE3B-201ENST00000340074 MAGEB17A8MXT2 336 aa14.39□□□□□ -0.11
UBE3B-201ENST00000340074 SAP18O00422 153 aaKnown RBP14.39□□□□□ -0.11
UBE3B-201ENST00000340074 RGS16O15492 202 aaPredicted RBP14.39□□□□□ -0.11
UBE3B-201ENST00000340074 FHP07954 510 aa14.39□□□□□ -0.11
UBE3B-201ENST00000340074 CPA3P15088 417 aa14.39□□□□□ -0.11
UBE3B-201ENST00000340074 CREB1P16220 341 aa14.39□□□□□ -0.11
UBE3B-201ENST00000340074 ZNF10P21506 573 aaPredicted RBP14.39□□□□□ -0.11
UBE3B-201ENST00000340074 CERS1P27544 350 aa14.39□□□□□ -0.11
UBE3B-201ENST00000340074 CCL11P51671 97 aa14.39□□□□□ -0.11
UBE3B-201ENST00000340074 RRADP55042 308 aa14.39□□□□□ -0.11
UBE3B-201ENST00000340074 PHEXP78562 749 aa14.39□□□□□ -0.11
UBE3B-201ENST00000340074 TGM3Q08188 693 aa14.39□□□□□ -0.11
UBE3B-201ENST00000340074 GGTA1PQ4G0N0 100 aa14.39□□□□□ -0.11
UBE3B-201ENST00000340074 BEND6Q5SZJ8 279 aaPredicted RBP14.39□□□□□ -0.11
UBE3B-201ENST00000340074 DEPDC1Q5TB30 811 aa14.39□□□□□ -0.11
UBE3B-201ENST00000340074 KHDRBS2Q5VWX1 349 aaKnown RBP14.39□□□□□ -0.11
UBE3B-201ENST00000340074 FAM219BQ5XKK7 198 aa14.39□□□□□ -0.11
UBE3B-201ENST00000340074 CHSY3Q70JA7 882 aa14.39□□□□□ -0.11
UBE3B-201ENST00000340074 UBE3DQ7Z6J8 389 aa14.39□□□□□ -0.11
UBE3B-201ENST00000340074 CA13Q8N1Q1 262 aa14.39□□□□□ -0.11
UBE3B-201ENST00000340074 ARMC2Q8NEN0 867 aa14.39□□□□□ -0.11
UBE3B-201ENST00000340074 OR11G2Q8NGC1 345 aa14.39□□□□□ -0.11
UBE3B-201ENST00000340074 TBC1D20Q96BZ9 403 aa14.39□□□□□ -0.11
UBE3B-201ENST00000340074 KCNC2Q96PR1 638 aa14.39□□□□□ -0.11
UBE3B-201ENST00000340074 OR1F2PQ96R84 312 aa14.39□□□□□ -0.11
UBE3B-201ENST00000340074 SMC6Q96SB8 1091 aa14.39□□□□□ -0.11
UBE3B-201ENST00000340074 ADNPQ9H2P0 1102 aa14.39□□□□□ -0.11
UBE3B-201ENST00000340074 CLK4Q9HAZ1 481 aaKnown RBP14.39□□□□□ -0.11
UBE3B-201ENST00000340074 PRDM7Q9NQW5 492 aa14.39□□□□□ -0.11
UBE3B-201ENST00000340074 LANCL2Q9NS86 450 aa14.39□□□□□ -0.11
UBE3B-201ENST00000340074 ZNF225Q9UK10 706 aa14.39□□□□□ -0.11
UBE3B-201ENST00000340074 RTCAO00442 366 aaKnown RBP14.38□□□□□ -0.11
UBE3B-201ENST00000340074 B3GALT2O43825 422 aa14.38□□□□□ -0.11
UBE3B-201ENST00000340074 ALOX12BO75342 701 aa14.38□□□□□ -0.11
UBE3B-201ENST00000340074 OR4F21O95013 312 aa14.38□□□□□ -0.11
UBE3B-201ENST00000340074 ACPPP15309 386 aa14.38□□□□□ -0.11
UBE3B-201ENST00000340074 IL10P22301 178 aa14.38□□□□□ -0.11
UBE3B-201ENST00000340074 MTTPP55157 894 aa14.38□□□□□ -0.11
UBE3B-201ENST00000340074 RUNX2Q13950 521 aa14.38□□□□□ -0.11
UBE3B-201ENST00000340074 TUBB8Q3ZCM7 444 aa14.38□□□□□ -0.11
UBE3B-201ENST00000340074 TMEM35AQ53FP2 167 aa14.38□□□□□ -0.11
UBE3B-201ENST00000340074 FRG2Q64ET8 278 aa14.38□□□□□ -0.11
UBE3B-201ENST00000340074 TTC19Q6DKK2 380 aaPredicted RBP14.38□□□□□ -0.11
UBE3B-201ENST00000340074 ZNF793Q6ZN11 406 aa14.38□□□□□ -0.11
UBE3B-201ENST00000340074 CCNYL1Q8N7R7 359 aa14.38□□□□□ -0.11
UBE3B-201ENST00000340074 SRFBP1Q8NEF9 429 aaKnown RBP14.38□□□□□ -0.11
UBE3B-201ENST00000340074 ABHD17AQ96GS6 310 aa14.38□□□□□ -0.11
UBE3B-201ENST00000340074 MAGEB10Q96LZ2 347 aaPredicted RBP14.38□□□□□ -0.11
UBE3B-201ENST00000340074 FRG2BQ96QU4 278 aa14.38□□□□□ -0.11
UBE3B-201ENST00000340074 SERINC2Q96SA4 455 aa14.38□□□□□ -0.11
UBE3B-201ENST00000340074 ZNF382Q96SR6 550 aa14.38□□□□□ -0.11
UBE3B-201ENST00000340074 NPLQ9BXD5 320 aaPredicted RBP14.38□□□□□ -0.11
UBE3B-201ENST00000340074 CENPHQ9H3R5 247 aa14.38□□□□□ -0.11
UBE3B-201ENST00000340074 GSTO2Q9H4Y5 243 aa14.38□□□□□ -0.11
UBE3B-201ENST00000340074 COPS7BQ9H9Q2 264 aaPredicted RBP14.38□□□□□ -0.11
UBE3B-201ENST00000340074 OXSMQ9NWU1 459 aa14.38□□□□□ -0.11
UBE3B-201ENST00000340074 SLC17A7Q9P2U7 560 aa14.38□□□□□ -0.11
UBE3B-201ENST00000340074 TUBD1Q9UJT1 453 aa14.38□□□□□ -0.11
UBE3B-201ENST00000340074 A6NL46 340 aa14.37□□□□□ -0.11
UBE3B-201ENST00000340074 FAM227AF5H4B4 570 aa14.37□□□□□ -0.11
UBE3B-201ENST00000340074 PSMD12O00232 456 aaPredicted RBP14.37□□□□□ -0.11
UBE3B-201ENST00000340074 FOXE1O00358 373 aaPredicted RBP14.37□□□□□ -0.11
UBE3B-201ENST00000340074 B4GALT2O60909 372 aa14.37□□□□□ -0.11
UBE3B-201ENST00000340074 ETHE1O95571 254 aa14.37□□□□□ -0.11
UBE3B-201ENST00000340074 MLYCDO95822 493 aa14.37□□□□□ -0.11
UBE3B-201ENST00000340074 PRB1P04280 392 aa14.37□□□□□ -0.11
UBE3B-201ENST00000340074 C8orf89P0DMQ9 161 aa14.37□□□□□ -0.11
UBE3B-201ENST00000340074 RNH1P13489 461 aaKnown RBP14.37□□□□□ -0.11
UBE3B-201ENST00000340074 PTX3P26022 381 aaPredicted RBP14.37□□□□□ -0.11
UBE3B-201ENST00000340074 NAGLUP54802 743 aa14.37□□□□□ -0.11
UBE3B-201ENST00000340074 DNAJB13P59910 316 aa14.37□□□□□ -0.11
UBE3B-201ENST00000340074 RHAGQ02094 409 aa14.37□□□□□ -0.11
UBE3B-201ENST00000340074 EEF1A2Q05639 463 aaKnown RBP14.37□□□□□ -0.11
UBE3B-201ENST00000340074 LCP2Q13094 533 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms