RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 CAMK2DQ13557 499 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 ATP6AP1LQ52LC2 224 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 CPZQ66K79 652 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 NOTUMQ6P988 496 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 CNIH2Q6PI25 160 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 POMZP3Q6PJE2 187 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 AFTPHQ6ULP2 937 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 UNQ6494/PRO21346Q6UXR6 183 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 SLC22A9Q8IVM8 553 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 KRT78Q8N1N4 520 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 DNAJC22Q8N4W6 341 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 GPR150Q8NGU9 434 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 ZDHHC1Q8WTX9 485 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 ELMOD3Q96FG2 381 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 SPATA13Q96N96 652 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 ZNF583Q96ND8 569 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 TGIF2Q9GZN2 237 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 UNKLQ9H9P5 680 aaKnown RBP9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 CDHR5Q9HBB8 845 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 OLA1Q9NTK5 396 aaKnown RBP9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 UFSP2Q9NUQ7 469 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 SLC6A5Q9Y345 797 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 RBBP6Q7Z6E9 1792 aaKnown RBP9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 LANCL1O43813 399 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 RECKO95980 971 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 F9P00740 461 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 VTNP04004 478 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 MUC1P15941 1255 aaPredicted RBP9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 LBPP18428 481 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 S100PP25815 95 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 POLR2JP52435 117 aaKnown RBP9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 ZNF143P52747 638 aaPredicted RBP9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 CTBP2P56545 445 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 RCAN2Q14206 197 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 PFKFB4Q16877 469 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 ZNF789Q5FWF6 425 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 TCTE1Q5JU00 501 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 FAM171A1Q5VUB5 890 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 KIAA1614Q5VZ46 1190 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 OR6B2Q6IFH4 312 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 NIM1KQ8IY84 436 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 KLHL36Q8N4N3 616 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 OXR1Q8N573 874 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 C12orf29Q8N999 325 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 HASPINQ8TF76 798 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 CNOT9Q92600 299 aaKnown RBP9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 SCRN2Q96FV2 425 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 GMCL1Q96IK5 515 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 TMEM43Q9BTV4 400 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 POLE3Q9NRF9 147 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 LATS2Q9NRM7 1088 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 TMPRSS4Q9NRS4 437 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 VAPAQ9P0L0 249 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 CDH10Q9Y6N8 788 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 DBX1A6NMT0 343 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 ERVV-1B6SEH8 477 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 AIPO00170 330 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 WRBO00258 174 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 MFSD11O43934 449 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 ICOSLGO75144 302 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 NCR1O76036 304 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 LALBAP00709 142 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 NUDT7P0C024 238 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 HLA-EP13747 358 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 SELENOPP49908 381 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 ATP4BP51164 291 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 ACTR1AP61163 376 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 BTG1P62324 171 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 MLLT1Q03111 559 aaPredicted RBP9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 KEAP1Q14145 624 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 ZSWIM7Q19AV6 140 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 PRAMEF18Q5VWM3 479 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 B3GLCTQ6Y288 498 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 PID1Q7Z2X4 250 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 OR5T2Q8NGG2 359 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 OR9Q1Q8NGQ5 310 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 P2RY11Q96G91 374 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 RBM18Q96H35 190 aaKnown RBP9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 H2AFJQ9BTM1 129 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 CPEB1Q9BZB8 566 aaKnown RBP9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 HDHD2Q9H0R4 259 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 KCNH6Q9H252 994 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 NLGN3Q9NZ94 848 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 LEF1Q9UJU2 399 aaPredicted RBP9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 GPR45Q9Y5Y3 372 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 CENPFP49454 3210 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 GLYATL1P3A0A0U1RQE8 302 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 E9PI62 339 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 CXCR6O00574 342 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 PROM1O43490 865 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 EEDO75530 441 aaKnown RBP9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 TGM6O95932 706 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 FBP1P09467 338 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 ENGP17813 658 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 GPD1P21695 349 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 ATP5A1P25705 553 aaKnown RBP9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 ACTR1BP42025 376 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 FOXM1Q08050 763 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 STRIP1Q5VSL9 837 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms