RNA–Protein interactions for RNA: ENST00000336328.10

CMTM1-204, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-204ENST00000336328 NCF1P14598 390 aaPredicted RBP16.63■□□□□ 0.25
CMTM1-204ENST00000336328 COL8A1P27658 744 aa16.63■□□□□ 0.25
CMTM1-204ENST00000336328 GDF5P43026 501 aa16.63■□□□□ 0.25
CMTM1-204ENST00000336328 CYB561P49447 251 aa16.63■□□□□ 0.25
CMTM1-204ENST00000336328 HSD17B7P56937 341 aa16.63■□□□□ 0.25
CMTM1-204ENST00000336328 ALDH6A1Q02252 535 aaKnown RBP16.63■□□□□ 0.25
CMTM1-204ENST00000336328 SLBPQ14493 270 aaKnown RBP eCLIP16.63■□□□□ 0.25
CMTM1-204ENST00000336328 TERF2Q15554 542 aa16.63■□□□□ 0.25
CMTM1-204ENST00000336328 C1QL3Q5VWW1 255 aa16.63■□□□□ 0.25
CMTM1-204ENST00000336328 SPINK14Q6IE38 97 aa16.63■□□□□ 0.25
CMTM1-204ENST00000336328 TRIM40Q6P9F5 258 aa16.63■□□□□ 0.25
CMTM1-204ENST00000336328 SHISA5Q8N114 240 aa16.63■□□□□ 0.25
CMTM1-204ENST00000336328 CA13Q8N1Q1 262 aa16.63■□□□□ 0.25
CMTM1-204ENST00000336328 STAG3L4Q8TBR4 150 aa16.63■□□□□ 0.25
CMTM1-204ENST00000336328 THAP3Q8WTV1 239 aaPredicted RBP16.63■□□□□ 0.25
CMTM1-204ENST00000336328 TMEM125Q96AQ2 219 aa16.63■□□□□ 0.25
CMTM1-204ENST00000336328 SCMH1Q96GD3 660 aa16.63■□□□□ 0.25
CMTM1-204ENST00000336328 SIGLEC12Q96PQ1 595 aa16.63■□□□□ 0.25
CMTM1-204ENST00000336328 GPR22Q99680 433 aa16.63■□□□□ 0.25
CMTM1-204ENST00000336328 EFCAB11Q9BUY7 163 aa16.63■□□□□ 0.25
CMTM1-204ENST00000336328 KLHL1Q9NR64 748 aa16.63■□□□□ 0.25
CMTM1-204ENST00000336328 SMYD2Q9NRG4 433 aa16.63■□□□□ 0.25
CMTM1-204ENST00000336328 CD274Q9NZQ7 290 aa16.63■□□□□ 0.25
CMTM1-204ENST00000336328 TCRBV9S1A1TA0A576 114 aa16.62■□□□□ 0.25
CMTM1-204ENST00000336328 FAM159BA6NKW6 160 aa16.62■□□□□ 0.25
CMTM1-204ENST00000336328 CCL21O00585 134 aa16.62■□□□□ 0.25
CMTM1-204ENST00000336328 ZG16O60844 167 aa16.62■□□□□ 0.25
CMTM1-204ENST00000336328 CD1DP15813 335 aa16.62■□□□□ 0.25
CMTM1-204ENST00000336328 MST1P26927 711 aa16.62■□□□□ 0.25
CMTM1-204ENST00000336328 CLCN2P51788 898 aa16.62■□□□□ 0.25
CMTM1-204ENST00000336328 PLTPP55058 493 aa16.62■□□□□ 0.25
CMTM1-204ENST00000336328 RAB10P61026 200 aa16.62■□□□□ 0.25
CMTM1-204ENST00000336328 XKR6Q5GH73 641 aa16.62■□□□□ 0.25
CMTM1-204ENST00000336328 CTAGE3PQ8IX95 158 aa16.62■□□□□ 0.25
CMTM1-204ENST00000336328 ZNF595Q8IYB9 648 aa16.62■□□□□ 0.25
CMTM1-204ENST00000336328 UBE2E3Q969T4 207 aa16.62■□□□□ 0.25
CMTM1-204ENST00000336328 KIAA1191Q96A73 305 aa16.62■□□□□ 0.25
CMTM1-204ENST00000336328 MS4A6EQ96DS6 147 aa16.62■□□□□ 0.25
CMTM1-204ENST00000336328 PTCD3Q96EY7 689 aaKnown RBP16.62■□□□□ 0.25
CMTM1-204ENST00000336328 ROGDIQ9GZN7 287 aa16.62■□□□□ 0.25
CMTM1-204ENST00000336328 REXO4Q9GZR2 422 aaKnown RBP16.62■□□□□ 0.25
CMTM1-204ENST00000336328 NMRAL1Q9HBL8 299 aa16.62■□□□□ 0.25
CMTM1-204ENST00000336328 TEX15Q9BXT5 2789 aa16.61■□□□□ 0.25
CMTM1-204ENST00000336328 IGKV3D-11A0A0A0MRZ8 115 aa16.61■□□□□ 0.25
CMTM1-204ENST00000336328 ASPDHA6ND91 283 aa16.61■□□□□ 0.25
CMTM1-204ENST00000336328 CXorf49A8MYA2 514 aaPredicted RBP16.61■□□□□ 0.25
CMTM1-204ENST00000336328 FAM227AF5H4B4 570 aa16.61■□□□□ 0.25
CMTM1-204ENST00000336328 TAPBPO15533 448 aa16.61■□□□□ 0.25
CMTM1-204ENST00000336328 ERI3O43414 337 aaKnown RBP16.61■□□□□ 0.25
CMTM1-204ENST00000336328 RAD51CO43502 376 aa16.61■□□□□ 0.25
CMTM1-204ENST00000336328 WISP3O95389 354 aaPredicted RBP16.61■□□□□ 0.25
CMTM1-204ENST00000336328 MAOAP21397 527 aa16.61■□□□□ 0.25
CMTM1-204ENST00000336328 CRABP2P29373 138 aa16.61■□□□□ 0.25
CMTM1-204ENST00000336328 CA7P43166 264 aa16.61■□□□□ 0.25
CMTM1-204ENST00000336328 RAB38P57729 211 aa16.61■□□□□ 0.25
CMTM1-204ENST00000336328 MLF1P58340 268 aa16.61■□□□□ 0.25
CMTM1-204ENST00000336328 NAB1Q13506 487 aa16.61■□□□□ 0.25
CMTM1-204ENST00000336328 ART3Q13508 389 aa16.61■□□□□ 0.25
CMTM1-204ENST00000336328 EFTUD2Q15029 972 aaKnown RBP eCLIP16.61■□□□□ 0.25
CMTM1-204ENST00000336328 MAPKAPK3Q16644 382 aa16.61■□□□□ 0.25
CMTM1-204ENST00000336328 SP5Q6BEB4 398 aaPredicted RBP16.61■□□□□ 0.25
CMTM1-204ENST00000336328 ZNF787Q6DD87 383 aa16.61■□□□□ 0.25
CMTM1-204ENST00000336328 RPTNQ6XPR3 784 aa16.61■□□□□ 0.25
CMTM1-204ENST00000336328 RAPH1Q70E73 1250 aa16.61■□□□□ 0.25
CMTM1-204ENST00000336328 CCDC91Q7Z6B0 441 aa16.61■□□□□ 0.25
CMTM1-204ENST00000336328 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.61■□□□□ 0.25
CMTM1-204ENST00000336328 AMER2Q8N7J2 671 aa16.61■□□□□ 0.25
CMTM1-204ENST00000336328 SNX31Q8N9S9 440 aa16.61■□□□□ 0.25
CMTM1-204ENST00000336328 B3GNT7Q8NFL0 401 aa16.61■□□□□ 0.25
CMTM1-204ENST00000336328 OR2L5Q8NG80 312 aa16.61■□□□□ 0.25
CMTM1-204ENST00000336328 WDR34Q96EX3 536 aa16.61■□□□□ 0.25
CMTM1-204ENST00000336328 UBXN10Q96LJ8 280 aa16.61■□□□□ 0.25
CMTM1-204ENST00000336328 SERINC2Q96SA4 455 aa16.61■□□□□ 0.25
CMTM1-204ENST00000336328 NPAS2Q99743 824 aa16.61■□□□□ 0.25
CMTM1-204ENST00000336328 CCDC77Q9BR77 488 aa16.61■□□□□ 0.25
CMTM1-204ENST00000336328 TRIM45Q9H8W5 580 aaPredicted RBP16.61■□□□□ 0.25
CMTM1-204ENST00000336328 COPS7BQ9H9Q2 264 aaPredicted RBP16.61■□□□□ 0.25
CMTM1-204ENST00000336328 CAB39LQ9H9S4 337 aa16.61■□□□□ 0.25
CMTM1-204ENST00000336328 PRTFDC1Q9NRG1 225 aa16.61■□□□□ 0.25
CMTM1-204ENST00000336328 ANKRD10Q9NXR5 420 aa16.61■□□□□ 0.25
CMTM1-204ENST00000336328 RNF112Q9ULX5 631 aa16.61■□□□□ 0.25
CMTM1-204ENST00000336328 ENTPD4Q9Y227 616 aa16.61■□□□□ 0.25
CMTM1-204ENST00000336328 GTF3C1Q12789 2109 aa16.6■□□□□ 0.25
CMTM1-204ENST00000336328 PHGDHO43175 533 aaKnown RBP16.6■□□□□ 0.25
CMTM1-204ENST00000336328 HNRNPRO43390 633 aaKnown RBP16.6■□□□□ 0.25
CMTM1-204ENST00000336328 ESRRAP11474 423 aaPredicted RBP16.6■□□□□ 0.25
CMTM1-204ENST00000336328 STX2P32856 288 aa16.6■□□□□ 0.25
CMTM1-204ENST00000336328 TRHRP34981 398 aaPredicted RBP16.6■□□□□ 0.25
CMTM1-204ENST00000336328 HSPA7P48741 367 aa16.6■□□□□ 0.25
CMTM1-204ENST00000336328 HLCSP50747 726 aa16.6■□□□□ 0.25
CMTM1-204ENST00000336328 MTTPP55157 894 aa16.6■□□□□ 0.25
CMTM1-204ENST00000336328 ETF1P62495 437 aaKnown RBP16.6■□□□□ 0.25
CMTM1-204ENST00000336328 MRPS25P82663 173 aaKnown RBP16.6■□□□□ 0.25
CMTM1-204ENST00000336328 IRF8Q02556 426 aa16.6■□□□□ 0.25
CMTM1-204ENST00000336328 SLC13A2Q13183 592 aa16.6■□□□□ 0.25
CMTM1-204ENST00000336328 ZKSCAN8Q15776 578 aaPredicted RBP16.6■□□□□ 0.25
CMTM1-204ENST00000336328 TBCCQ15814 346 aa16.6■□□□□ 0.25
CMTM1-204ENST00000336328 PDK4Q16654 411 aa16.6■□□□□ 0.25
CMTM1-204ENST00000336328 C18orf21Q32NC0 220 aaPredicted RBP16.6■□□□□ 0.25
CMTM1-204ENST00000336328 ADPRMQ3LIE5 342 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms