RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 IFNA10P01566 189 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 CREB1P16220 341 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 CHRNB2P17787 502 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 PRKXP51817 358 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 CLRN1P58418 232 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 TLE3Q04726 772 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 NFE2L1Q14494 772 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 TRAM2Q15035 370 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 PAQR3Q6TCH7 311 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 C7orf34Q96L11 122 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 FCRL5Q96RD9 977 aa16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 SAV1Q9H4B6 383 aaPredicted RBP16.33■□□□□ 0.2
SMCHD1-201ENST00000320876 RBBP9O75884 186 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 PAK4O96013 591 aaPredicted RBP16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 ATP4BP51164 291 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 SLC2A7Q6PXP3 512 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 SLA2Q9H6Q3 261 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 WNT9AO14904 365 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 RNF13O43567 381 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 PRKYO43930 277 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 OPN1SWP03999 348 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 JUNP05412 331 aaKnown RBP16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 SPATA31D3P0C874 917 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 UFM1P61960 85 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 SPATA31D4Q6ZUB0 917 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 HYLS1Q96M11 299 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 OR51I1Q9H343 314 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 GOLGA2P5Q9HBQ8 144 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 TFPTP0C1Z6 253 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 GSTM2P28161 218 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 GET4Q7L5D6 327 aaPredicted RBP16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 COMMD7Q86VX2 200 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 NRSN1Q8IZ57 195 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 OR2T33Q8NG76 320 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 OR7D4Q8NG98 312 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 C19orf12Q9NSK7 152 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 TGFB1P01137 390 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 ASPAP45381 313 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 LILRA4P59901 499 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 DNAJB13P59910 316 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 C4orf32Q8N8J7 132 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 MEPEQ9NQ76 525 aaPredicted RBP16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 IL36AQ9UHA7 158 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 ZNF536O15090 1300 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 HLA-DQB2P05538 268 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 CFL1P23528 166 aaKnown RBP16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 TMEM236Q5W0B7 351 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 C1orf127Q8N9H9 656 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 OR8J3Q8NGG0 315 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 MALSU1Q96EH3 234 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 BEX2Q9BXY8 128 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 BEX1Q9HBH7 125 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 FANCFQ9NPI8 374 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 NANSQ9NR45 359 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 KLRF1Q9NZS2 232 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 PABPC4LP0CB38 370 aaKnown RBP16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 LAG3P18627 525 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 BRAT1Q6PJG6 821 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 HERC2P3Q9BVR0 1158 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 FNIP2Q9P278 1114 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 TEX264Q9Y6I9 313 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 IRAK2O43187 625 aa16.32■□□□□ 0.2
SMCHD1-201ENST00000320876 VSTM5A8MXK1 200 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 NKX6-1P78426 367 aaPredicted RBP16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 HMGCS1Q01581 520 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 SNTA1Q13424 505 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 CARM1Q86X55 608 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 PLA2G15Q8NCC3 412 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 PEX13Q92968 403 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 NIFKQ9BYG3 293 aaKnown RBP16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 EMX2Q04743 252 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 CDNFQ49AH0 187 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 SIRPB2Q5JXA9 342 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 USP50Q70EL3 339 aaPredicted RBP16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 ZC3HC1Q86WB0 502 aaKnown RBP16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 CHPT1Q8WUD6 406 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 HERVK_113Q902F9 699 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 Q9N2J8 555 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 SALL4Q9UJQ4 1053 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 KCNS2Q9ULS6 477 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 ERI3O43414 337 aaKnown RBP16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 NIPSNAP2O75323 286 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 C14orf119Q9NWQ9 140 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 TAS2R8Q9NYW2 309 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 SLC35F4A4IF30 521 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 ALPPL2P10696 532 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 UNGP13051 313 aaPredicted RBP16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 SUN3Q8TAQ9 357 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 NSMAFQ92636 917 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 LIN37Q96GY3 246 aaPredicted RBP16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 NPLQ9BXD5 320 aaPredicted RBP16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 DHDHQ9UQ10 334 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 NKAPLQ5M9Q1 402 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 OR4F3Q6IEY1 312 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 ZNF529Q6P280 563 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 UGT2A3Q6UWM9 527 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 PROKR1Q8TCW9 393 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 A0A1W2PPW3 197 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 TMEM233B4DJY2 109 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 RFPL2O75678 378 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms