RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 DNAJB5O75953 348 aa16.09■□□□□ 0.17
PHRF1-201ENST00000264555 ADRB3P13945 408 aa16.09■□□□□ 0.17
PHRF1-201ENST00000264555 WDR5P61964 334 aaKnown RBP16.09■□□□□ 0.17
PHRF1-201ENST00000264555 RCAN2Q14206 197 aa16.09■□□□□ 0.17
PHRF1-201ENST00000264555 MINDY2Q8NBR6 621 aa16.09■□□□□ 0.17
PHRF1-201ENST00000264555 EZH1Q92800 747 aaPredicted RBP16.09■□□□□ 0.17
PHRF1-201ENST00000264555 TMEM125Q96AQ2 219 aa16.09■□□□□ 0.17
PHRF1-201ENST00000264555 DGAT2Q96PD7 388 aa16.09■□□□□ 0.17
PHRF1-201ENST00000264555 STOX2Q9P2F5 926 aaPredicted RBP16.09■□□□□ 0.17
PHRF1-201ENST00000264555 GMFGO60234 142 aa16.09■□□□□ 0.17
PHRF1-201ENST00000264555 RCBTB2O95199 551 aa16.09■□□□□ 0.17
PHRF1-201ENST00000264555 CHRM5P08912 532 aaPredicted RBP16.09■□□□□ 0.17
PHRF1-201ENST00000264555 AZGP1P25311 298 aaKnown RBP16.09■□□□□ 0.17
PHRF1-201ENST00000264555 ACVR2AP27037 513 aa16.09■□□□□ 0.17
PHRF1-201ENST00000264555 TMBIM6P55061 237 aa16.09■□□□□ 0.17
PHRF1-201ENST00000264555 C5orf22Q49AR2 442 aa16.09■□□□□ 0.17
PHRF1-201ENST00000264555 TOX2Q96NM4 488 aa16.09■□□□□ 0.17
PHRF1-201ENST00000264555 RHCGQ9UBD6 479 aa16.09■□□□□ 0.17
PHRF1-201ENST00000264555 HCSTQ9UBK5 93 aa16.09■□□□□ 0.17
PHRF1-201ENST00000264555 CDC14AQ9UNH5 594 aa16.09■□□□□ 0.17
PHRF1-201ENST00000264555 ECM29Q5VYK3 1845 aa16.09■□□□□ 0.17
PHRF1-201ENST00000264555 GLOD5A6NK44 160 aa16.09■□□□□ 0.17
PHRF1-201ENST00000264555 SLC16A8O95907 504 aa16.09■□□□□ 0.17
PHRF1-201ENST00000264555 HOXD9P28356 352 aaPredicted RBP16.09■□□□□ 0.17
PHRF1-201ENST00000264555 PRDX3P30048 256 aaKnown RBP16.09■□□□□ 0.17
PHRF1-201ENST00000264555 CTSOP43234 321 aaPredicted RBP16.09■□□□□ 0.17
PHRF1-201ENST00000264555 DGKEP52429 567 aa16.09■□□□□ 0.17
PHRF1-201ENST00000264555 MOGQ16653 247 aa16.09■□□□□ 0.17
PHRF1-201ENST00000264555 NCSTNQ92542 709 aa16.09■□□□□ 0.17
PHRF1-201ENST00000264555 C11orf24Q96F05 449 aaPredicted RBP16.09■□□□□ 0.17
PHRF1-201ENST00000264555 PDLIM5Q96HC4 596 aaKnown RBP16.09■□□□□ 0.17
PHRF1-201ENST00000264555 PIP5K1AQ99755 562 aa16.09■□□□□ 0.17
PHRF1-201ENST00000264555 LIN28AQ9H9Z2 209 aaKnown RBP16.09■□□□□ 0.17
PHRF1-201ENST00000264555 ZNF222Q9UK12 451 aa16.09■□□□□ 0.17
PHRF1-201ENST00000264555 PCDHGB1Q9Y5G3 927 aa16.09■□□□□ 0.17
PHRF1-201ENST00000264555 FABP12A6NFH5 140 aa16.08■□□□□ 0.17
PHRF1-201ENST00000264555 KCNC1P48547 511 aa16.08■□□□□ 0.17
PHRF1-201ENST00000264555 BNC1Q01954 994 aa16.08■□□□□ 0.17
PHRF1-201ENST00000264555 ENPP6Q6UWR7 440 aa16.08■□□□□ 0.17
PHRF1-201ENST00000264555 SLC9B2Q86UD5 537 aa16.08■□□□□ 0.17
PHRF1-201ENST00000264555 NRG4Q8WWG1 115 aa16.08■□□□□ 0.17
PHRF1-201ENST00000264555 KCTD7Q96MP8 289 aa16.08■□□□□ 0.17
PHRF1-201ENST00000264555 MCUBQ9NWR8 336 aa16.08■□□□□ 0.17
PHRF1-201ENST00000264555 GJB3O75712 270 aa16.08■□□□□ 0.17
PHRF1-201ENST00000264555 RUNX3Q13761 415 aa16.08■□□□□ 0.17
PHRF1-201ENST00000264555 SHQ1Q6PI26 577 aaKnown RBP16.08■□□□□ 0.17
PHRF1-201ENST00000264555 RPTNQ6XPR3 784 aa16.08■□□□□ 0.17
PHRF1-201ENST00000264555 PGBD5Q8N414 524 aa16.08■□□□□ 0.17
PHRF1-201ENST00000264555 APIPQ96GX9 242 aa16.08■□□□□ 0.17
PHRF1-201ENST00000264555 KATNBL1Q9H079 304 aa16.08■□□□□ 0.17
PHRF1-201ENST00000264555 PDE4DIPQ5VU43 2346 aa16.08■□□□□ 0.16
PHRF1-201ENST00000264555 E7EQ34 232 aa16.08■□□□□ 0.16
PHRF1-201ENST00000264555 TLX2O43763 284 aaPredicted RBP16.08■□□□□ 0.16
PHRF1-201ENST00000264555 NTHL1P78549 312 aa16.08■□□□□ 0.16
PHRF1-201ENST00000264555 HDDC2Q7Z4H3 204 aa16.08■□□□□ 0.16
PHRF1-201ENST00000264555 NRROSQ86YC3 692 aa16.08■□□□□ 0.16
PHRF1-201ENST00000264555 WDR83Q9BRX9 315 aaKnown RBP16.08■□□□□ 0.16
PHRF1-201ENST00000264555 NTMT1Q9BV86 223 aa16.08■□□□□ 0.16
PHRF1-201ENST00000264555 ZDHHC7Q9NXF8 308 aa16.08■□□□□ 0.16
PHRF1-201ENST00000264555 LHX3Q9UBR4 397 aa16.08■□□□□ 0.16
PHRF1-201ENST00000264555 GPR45Q9Y5Y3 372 aa16.08■□□□□ 0.16
PHRF1-201ENST00000264555 MYOCOSA0A1B0GUC4 107 aa16.08■□□□□ 0.16
PHRF1-201ENST00000264555 A0A1W2PPW3 197 aa16.08■□□□□ 0.16
PHRF1-201ENST00000264555 CLPXO76031 633 aa16.08■□□□□ 0.16
PHRF1-201ENST00000264555 ATP5A1P25705 553 aaKnown RBP16.08■□□□□ 0.16
PHRF1-201ENST00000264555 DEFB103AP81534 67 aa16.08■□□□□ 0.16
PHRF1-201ENST00000264555 RAB39AQ14964 217 aa16.08■□□□□ 0.16
PHRF1-201ENST00000264555 PRRT3Q5FWE3 981 aa16.08■□□□□ 0.16
PHRF1-201ENST00000264555 C3orf30Q96M34 536 aa16.08■□□□□ 0.16
PHRF1-201ENST00000264555 F2RL3Q96RI0 385 aa16.08■□□□□ 0.16
PHRF1-201ENST00000264555 FAM129BQ96TA1 746 aa16.08■□□□□ 0.16
PHRF1-201ENST00000264555 DPH2Q9BQC3 489 aaPredicted RBP16.08■□□□□ 0.16
PHRF1-201ENST00000264555 FAM118AQ9NWS6 357 aa16.08■□□□□ 0.16
PHRF1-201ENST00000264555 MS4A12Q9NXJ0 267 aa16.08■□□□□ 0.16
PHRF1-201ENST00000264555 TBX1O43435 398 aa16.08■□□□□ 0.16
PHRF1-201ENST00000264555 AKAP8O43823 692 aaKnown RBP16.08■□□□□ 0.16
PHRF1-201ENST00000264555 ECDO95905 644 aaPredicted RBP16.08■□□□□ 0.16
PHRF1-201ENST00000264555 ASGR2P07307 311 aa16.08■□□□□ 0.16
PHRF1-201ENST00000264555 MYF6P23409 242 aa16.08■□□□□ 0.16
PHRF1-201ENST00000264555 FAUP35544 74 aaKnown RBP16.08■□□□□ 0.16
PHRF1-201ENST00000264555 MLLT3P42568 568 aaPredicted RBP16.08■□□□□ 0.16
PHRF1-201ENST00000264555 HLCSP50747 726 aa16.08■□□□□ 0.16
PHRF1-201ENST00000264555 ARFIP1P53367 373 aa16.08■□□□□ 0.16
PHRF1-201ENST00000264555 FAM189BP81408 668 aa16.08■□□□□ 0.16
PHRF1-201ENST00000264555 CYP4V2Q6ZWL3 525 aaPredicted RBP16.08■□□□□ 0.16
PHRF1-201ENST00000264555 ZNF527Q8NB42 609 aa16.08■□□□□ 0.16
PHRF1-201ENST00000264555 ISL2Q96A47 359 aa16.08■□□□□ 0.16
PHRF1-201ENST00000264555 TP53INP1Q96A56 240 aa16.08■□□□□ 0.16
PHRF1-201ENST00000264555 SLC46A2Q9BY10 475 aa16.08■□□□□ 0.16
PHRF1-201ENST00000264555 MAP10Q9P2G4 905 aa16.08■□□□□ 0.16
PHRF1-201ENST00000264555 CLEC4AQ9UMR7 237 aa16.08■□□□□ 0.16
PHRF1-201ENST00000264555 PCDHB14Q9Y5E9 798 aa16.08■□□□□ 0.16
PHRF1-201ENST00000264555 A0A1W2PQU0 124 aa16.07■□□□□ 0.16
PHRF1-201ENST00000264555 ELOA3DA6NLF2 546 aaPredicted RBP16.07■□□□□ 0.16
PHRF1-201ENST00000264555 PPP6CO00743 305 aa16.07■□□□□ 0.16
PHRF1-201ENST00000264555 AREL1O15033 823 aa16.07■□□□□ 0.16
PHRF1-201ENST00000264555 SOX14O95416 240 aa16.07■□□□□ 0.16
PHRF1-201ENST00000264555 KLF8O95600 359 aaPredicted RBP16.07■□□□□ 0.16
PHRF1-201ENST00000264555 CLCN7P51798 805 aa16.07■□□□□ 0.16
PHRF1-201ENST00000264555 FCHO2Q0JRZ9 810 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms