RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 TAS2R50P59544 299 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 STX1BP61266 288 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 STXBP1P61764 594 aaKnown RBP9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 OLR1P78380 273 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 INSM1Q01101 510 aaPredicted RBP9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 ZFP36L1Q07352 338 aaKnown RBP9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 MAD2L1Q13257 205 aaPredicted RBP9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 ZSCAN26Q16670 478 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 GSTA3Q16772 222 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 SMU1Q2TAY7 513 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 PRTGQ2VWP7 1150 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 TMEM35AQ53FP2 167 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 TMTC4Q5T4D3 741 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 ANKRD26P1Q6NSI1 321 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 TMEM214Q6NUQ4 689 aaKnown RBP9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 TRIM40Q6P9F5 258 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 PDSS2Q86YH6 399 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 HOMEZQ8IX15 550 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 CARFQ8N187 725 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 ARHGEF39Q8N4T4 335 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 ACOT4Q8N9L9 421 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 C16orf78Q8WTQ4 265 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 ZNF501Q96CX3 271 aaPredicted RBP9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 C10orf90Q96M02 699 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 ZNF285Q96NJ3 590 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 QRFPRQ96P65 431 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 FGF21Q9NSA1 209 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 ASIC5Q9NY37 505 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 AHSPQ9NZD4 102 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 FBXW2Q9UKT8 454 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 TMED5Q9Y3A6 229 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 KNTC1P50748 2209 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 FER1L5A0AVI2 2057 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 A0A0A6YYD5 115 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 HYKKA2RU49 373 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 PMS2P1A4D2B8 440 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 EFCAB7A8K855 629 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 SGK494L7N484 410 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 TOX3O15405 576 aaPredicted RBP9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 RFPL3O75679 317 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 SLC22A3O75751 556 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 OR2B3O76000 313 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 IL3P08700 152 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 ANKRD34CP0C6C1 535 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 PRPS2P11908 318 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 COX4I1P13073 169 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 ALOX12P18054 663 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 HIST1H1TP22492 207 aaPredicted RBP9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 MAPK1P28482 360 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 ATP4BP51164 291 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 DGKQP52824 942 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 HNRNPH2P55795 449 aaKnown RBP9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 FOXM1Q08050 763 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 SLAMF1Q13291 335 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 RUNX2Q13950 521 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 PRSS53Q2L4Q9 553 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 PDCD4Q53EL6 469 aaKnown RBP9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 FAM180BQ6P0A1 224 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 GALNT18Q6P9A2 607 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 DHRS13Q6UX07 377 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 NUDT13Q86X67 352 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 SNX32Q86XE0 403 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 KMT5CQ86Y97 462 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 OR7A2PQ8NGA2 310 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 OR5T3Q8NGG3 340 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 OR9A4Q8NGU2 314 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 GAL3ST3Q96A11 431 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 VPS33AQ96AX1 596 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 TM4SF18Q96CE8 201 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 KCTD12Q96CX2 325 aaKnown RBP9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 TMEM74Q96NL1 305 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 KCNC2Q96PR1 638 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 OR6C1Q96RD1 312 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 CTRCQ99895 268 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 DPYSL5Q9BPU6 564 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 MAPKAP1Q9BPZ7 522 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 CENPKQ9BS16 269 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 TBCDQ9BTW9 1192 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 DPY30Q9C005 99 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 CHRNA10Q9GZZ6 450 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 DDX31Q9H8H2 851 aaKnown RBP9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 APMAPQ9HDC9 416 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 SIRT5Q9NXA8 310 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 TEX10Q9NXF1 929 aaPredicted RBP9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 MCM8Q9UJA3 840 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 EXO1Q9UQ84 846 aaKnown RBP9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 NAALAD2Q9Y3Q0 740 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 A0A0A6YYC8 382 aaPredicted RBP9.23□□□□□ -0.93
SNRNP40-201ENST00000263694 GLOD5A6NK44 160 aa9.23□□□□□ -0.93
SNRNP40-201ENST00000263694 I3L1I5 382 aaPredicted RBP9.23□□□□□ -0.93
SNRNP40-201ENST00000263694 NR5A2O00482 541 aa9.23□□□□□ -0.93
SNRNP40-201ENST00000263694 ZSCAN9O15535 394 aaPredicted RBP9.23□□□□□ -0.93
SNRNP40-201ENST00000263694 FOXS1O43638 330 aa9.23□□□□□ -0.93
SNRNP40-201ENST00000263694 TIAF1O95411 115 aa9.23□□□□□ -0.93
SNRNP40-201ENST00000263694 FAM58BPP0C7Q3 252 aa9.23□□□□□ -0.93
SNRNP40-201ENST00000263694 CCL4P13236 92 aa9.23□□□□□ -0.93
SNRNP40-201ENST00000263694 CAPN3P20807 821 aa9.23□□□□□ -0.93
SNRNP40-201ENST00000263694 EFNA1P20827 205 aaPredicted RBP9.23□□□□□ -0.93
SNRNP40-201ENST00000263694 POLR2JP52435 117 aaKnown RBP9.23□□□□□ -0.93
SNRNP40-201ENST00000263694 MAPK12P53778 367 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms