RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 EEF1DP29692 281 aaKnown RBP12.03□□□□□ -0.48
VPREB3-201ENST00000248948 PIK3CBP42338 1070 aa12.03□□□□□ -0.48
VPREB3-201ENST00000248948 TSFMP43897 325 aaKnown RBP12.03□□□□□ -0.48
VPREB3-201ENST00000248948 ARFIP1P53367 373 aa12.03□□□□□ -0.48
VPREB3-201ENST00000248948 MTTPP55157 894 aa12.03□□□□□ -0.48
VPREB3-201ENST00000248948 OLR1P78380 273 aa12.03□□□□□ -0.48
VPREB3-201ENST00000248948 PHEXP78562 749 aa12.03□□□□□ -0.48
VPREB3-201ENST00000248948 TLE1Q04724 770 aa12.03□□□□□ -0.48
VPREB3-201ENST00000248948 Q0VFX4 171 aa12.03□□□□□ -0.48
VPREB3-201ENST00000248948 ABRAXAS2Q15018 415 aa12.03□□□□□ -0.48
VPREB3-201ENST00000248948 CRB2Q5IJ48 1285 aa12.03□□□□□ -0.48
VPREB3-201ENST00000248948 C10orf62Q5T681 223 aaPredicted RBP12.03□□□□□ -0.48
VPREB3-201ENST00000248948 SLC6A19Q695T7 634 aa12.03□□□□□ -0.48
VPREB3-201ENST00000248948 FAAH2Q6GMR7 532 aa12.03□□□□□ -0.48
VPREB3-201ENST00000248948 ABHD17CQ6PCB6 329 aa12.03□□□□□ -0.48
VPREB3-201ENST00000248948 IGFL2Q6UWQ7 119 aa12.03□□□□□ -0.48
VPREB3-201ENST00000248948 LANCL3Q6ZV70 420 aa12.03□□□□□ -0.48
VPREB3-201ENST00000248948 CPEB2Q7Z5Q1 589 aaKnown RBP12.03□□□□□ -0.48
VPREB3-201ENST00000248948 ANKRD37Q7Z713 158 aa12.03□□□□□ -0.48
VPREB3-201ENST00000248948 TDRPQ86YL5 185 aa12.03□□□□□ -0.48
VPREB3-201ENST00000248948 CA13Q8N1Q1 262 aa12.03□□□□□ -0.48
VPREB3-201ENST00000248948 PLPP5Q8NEB5 264 aa12.03□□□□□ -0.48
VPREB3-201ENST00000248948 OR7G3Q8NG95 312 aa12.03□□□□□ -0.48
VPREB3-201ENST00000248948 PPP4R1Q8TF05 950 aa12.03□□□□□ -0.48
VPREB3-201ENST00000248948 ZNF473Q8WTR7 871 aaKnown RBP12.03□□□□□ -0.48
VPREB3-201ENST00000248948 MZB1Q8WU39 189 aa12.03□□□□□ -0.48
VPREB3-201ENST00000248948 UBLCP1Q8WVY7 318 aaPredicted RBP12.03□□□□□ -0.48
VPREB3-201ENST00000248948 PNPLA2Q96AD5 504 aa12.03□□□□□ -0.48
VPREB3-201ENST00000248948 THOC3Q96J01 351 aaKnown RBP12.03□□□□□ -0.48
VPREB3-201ENST00000248948 IMMP1LQ96LU5 166 aa12.03□□□□□ -0.48
VPREB3-201ENST00000248948 MAGEB10Q96LZ2 347 aaPredicted RBP12.03□□□□□ -0.48
VPREB3-201ENST00000248948 QRFPRQ96P65 431 aa12.03□□□□□ -0.48
VPREB3-201ENST00000248948 SERINC2Q96SA4 455 aa12.03□□□□□ -0.48
VPREB3-201ENST00000248948 C1QTNF3Q9BXJ4 246 aa12.03□□□□□ -0.48
VPREB3-201ENST00000248948 EPS8L2Q9H6S3 715 aa12.03□□□□□ -0.48
VPREB3-201ENST00000248948 PCTPQ9UKL6 214 aa12.03□□□□□ -0.48
VPREB3-201ENST00000248948 MMACHCQ9Y4U1 282 aa12.03□□□□□ -0.48
VPREB3-201ENST00000248948 PCDHGA11Q9Y5H2 935 aa12.03□□□□□ -0.48
VPREB3-201ENST00000248948 SHANK1Q9Y566 2161 aa12.02□□□□□ -0.48
VPREB3-201ENST00000248948 IGKV3D-11A0A0A0MRZ8 115 aa12.02□□□□□ -0.49
VPREB3-201ENST00000248948 A8MT66 165 aa12.02□□□□□ -0.49
VPREB3-201ENST00000248948 ESPNB1AK53 854 aa12.02□□□□□ -0.49
VPREB3-201ENST00000248948 MASP2O00187 686 aa12.02□□□□□ -0.49
VPREB3-201ENST00000248948 CDC123O75794 336 aaPredicted RBP12.02□□□□□ -0.49
VPREB3-201ENST00000248948 SIX3O95343 332 aaPredicted RBP12.02□□□□□ -0.49
VPREB3-201ENST00000248948 B3GALT4O96024 378 aa12.02□□□□□ -0.49
VPREB3-201ENST00000248948 PRR35P0CG20 571 aa12.02□□□□□ -0.49
VPREB3-201ENST00000248948 SOX11P35716 441 aa12.02□□□□□ -0.49
VPREB3-201ENST00000248948 RAB38P57729 211 aa12.02□□□□□ -0.49
VPREB3-201ENST00000248948 BTN3A2P78410 334 aa12.02□□□□□ -0.49
VPREB3-201ENST00000248948 MFAP5Q13361 173 aa12.02□□□□□ -0.49
VPREB3-201ENST00000248948 RCN2Q14257 317 aa12.02□□□□□ -0.49
VPREB3-201ENST00000248948 NSDHLQ15738 373 aa12.02□□□□□ -0.49
VPREB3-201ENST00000248948 EXT1Q16394 746 aa12.02□□□□□ -0.49
VPREB3-201ENST00000248948 GGTA1PQ4G0N0 100 aa12.02□□□□□ -0.49
VPREB3-201ENST00000248948 NADK2Q4G0N4 442 aa12.02□□□□□ -0.49
VPREB3-201ENST00000248948 PLAG1Q6DJT9 500 aa12.02□□□□□ -0.49
VPREB3-201ENST00000248948 WDR93Q6P2C0 686 aa12.02□□□□□ -0.49
VPREB3-201ENST00000248948 PARP9Q8IXQ6 854 aa12.02□□□□□ -0.49
VPREB3-201ENST00000248948 RBMXL3Q8N7X1 1067 aaKnown RBP12.02□□□□□ -0.49
VPREB3-201ENST00000248948 L3MBTL4Q8NA19 623 aa12.02□□□□□ -0.49
VPREB3-201ENST00000248948 CMTM7Q96FZ5 175 aa12.02□□□□□ -0.49
VPREB3-201ENST00000248948 WDR77Q9BQA1 342 aaPredicted RBP12.02□□□□□ -0.49
VPREB3-201ENST00000248948 CENPKQ9BS16 269 aa12.02□□□□□ -0.49
VPREB3-201ENST00000248948 IPPKQ9H8X2 491 aa12.02□□□□□ -0.49
VPREB3-201ENST00000248948 DMRT3Q9NQL9 472 aa12.02□□□□□ -0.49
VPREB3-201ENST00000248948 PRDM9Q9NQV7 894 aa12.02□□□□□ -0.49
VPREB3-201ENST00000248948 PPT2Q9UMR5 302 aa12.02□□□□□ -0.49
VPREB3-201ENST00000248948 MRPS33Q9Y291 106 aaKnown RBP12.02□□□□□ -0.49
VPREB3-201ENST00000248948 B3GNT3Q9Y2A9 372 aa12.02□□□□□ -0.49
VPREB3-201ENST00000248948 TCRBV16S1A1N1A0A5B0 115 aa12.01□□□□□ -0.49
VPREB3-201ENST00000248948 LRRC14BA6NHZ5 514 aa12.01□□□□□ -0.49
VPREB3-201ENST00000248948 CDH16O75309 829 aa12.01□□□□□ -0.49
VPREB3-201ENST00000248948 GLRA3O75311 464 aa12.01□□□□□ -0.49
VPREB3-201ENST00000248948 CLDN9O95484 217 aa12.01□□□□□ -0.49
VPREB3-201ENST00000248948 NUDT17P0C025 328 aa12.01□□□□□ -0.49
VPREB3-201ENST00000248948 SBK3P0C264 359 aa12.01□□□□□ -0.49
VPREB3-201ENST00000248948 PCNAP12004 261 aa12.01□□□□□ -0.49
VPREB3-201ENST00000248948 TAC1P20366 129 aa12.01□□□□□ -0.49
VPREB3-201ENST00000248948 CERS1P27544 350 aa12.01□□□□□ -0.49
VPREB3-201ENST00000248948 PLA2G16P53816 162 aa12.01□□□□□ -0.49
VPREB3-201ENST00000248948 VSNL1P62760 191 aa12.01□□□□□ -0.49
VPREB3-201ENST00000248948 KHDRBS2Q5VWX1 349 aaKnown RBP12.01□□□□□ -0.49
VPREB3-201ENST00000248948 EMBQ6PCB8 327 aa12.01□□□□□ -0.49
VPREB3-201ENST00000248948 ISLR2Q6UXK2 745 aa12.01□□□□□ -0.49
VPREB3-201ENST00000248948 Q6ZS92 163 aa12.01□□□□□ -0.49
VPREB3-201ENST00000248948 CHSY3Q70JA7 882 aa12.01□□□□□ -0.49
VPREB3-201ENST00000248948 MYLK4Q86YV6 388 aaPredicted RBP12.01□□□□□ -0.49
VPREB3-201ENST00000248948 SHISA5Q8N114 240 aa12.01□□□□□ -0.49
VPREB3-201ENST00000248948 TMEM151AQ8N4L1 468 aa12.01□□□□□ -0.49
VPREB3-201ENST00000248948 ZADH2Q8N4Q0 377 aa12.01□□□□□ -0.49
VPREB3-201ENST00000248948 ARMC2Q8NEN0 867 aa12.01□□□□□ -0.49
VPREB3-201ENST00000248948 HUS1BQ8NHY5 278 aa12.01□□□□□ -0.49
VPREB3-201ENST00000248948 ZNF483Q8TF39 744 aaPredicted RBP12.01□□□□□ -0.49
VPREB3-201ENST00000248948 TSLPQ969D9 159 aa12.01□□□□□ -0.49
VPREB3-201ENST00000248948 PHF21BQ96EK2 531 aa12.01□□□□□ -0.49
VPREB3-201ENST00000248948 LPAR4Q99677 370 aa12.01□□□□□ -0.49
VPREB3-201ENST00000248948 TBCDQ9BTW9 1192 aa12.01□□□□□ -0.49
VPREB3-201ENST00000248948 NTMT1Q9BV86 223 aa12.01□□□□□ -0.49
VPREB3-201ENST00000248948 LYRM4Q9HD34 91 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms