RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 C10orf62Q5T681 223 aaPredicted RBP15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 ASTLQ6HA08 431 aaPredicted RBP15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 LINC00299Q6ZSB3 139 aa15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 METTL4Q8N3J2 472 aa15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 ZNF366Q8N895 744 aa15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 TRMT2BQ96GJ1 504 aaKnown RBP15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 LYSMD1Q96S90 227 aa15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 TSEN34Q9BSV6 310 aaKnown RBP15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 MRPL17Q9NRX2 175 aaKnown RBP15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 SH2B3Q9UQQ2 575 aa15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 GNRH1P01148 92 aa15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 RGS6P49758 472 aa15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 CDKL4Q5MAI5 379 aa15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 RNF130Q86XS8 419 aa15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 FAM217AQ8IXS0 508 aa15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 POP5Q969H6 163 aaKnown RBP15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 RNF208Q9H0X6 261 aa15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 FAM83DQ9H4H8 585 aa15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 ZNF232Q9UNY5 417 aa15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 PADI2Q9Y2J8 665 aa15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 PRAMEF33A0A0G2JMD5 474 aa15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 A6NL46 340 aa15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 ADAMDEC1O15204 470 aa15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 PRAMEF10O60809 474 aa15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 WEE1P30291 646 aa15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 RPS26P62854 115 aaKnown RBP15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 TUBA1BP68363 451 aa15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 IFI44LQ53G44 452 aa15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 PLEKHS1Q5SXH7 462 aa15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 TUBA1AQ71U36 451 aa15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 KIAA1958Q8N8K9 716 aa15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 ATL1Q8WXF7 558 aa15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 STARD8Q92502 1023 aa15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 TMEM159Q96B96 161 aa15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 FAM129BQ96TA1 746 aa15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 CORO1BQ9BR76 489 aa15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 SORBS1Q9BX66 1292 aaKnown RBP15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 RERGLQ9H628 205 aa15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 IFT52Q9Y366 437 aa15.88■□□□□ 0.13
HNRNPU-228ENST00000640306 CDH23Q9H251 3354 aa15.87■□□□□ 0.13
HNRNPU-228ENST00000640306 FADS2P1A8MWK0 482 aa15.87■□□□□ 0.13
HNRNPU-228ENST00000640306 KIAA0513O60268 411 aa15.87■□□□□ 0.13
HNRNPU-228ENST00000640306 IGFBP1P08833 259 aaPredicted RBP15.87■□□□□ 0.13
HNRNPU-228ENST00000640306 MPC1LP0DKB6 136 aa15.87■□□□□ 0.13
HNRNPU-228ENST00000640306 PCGF2P35227 344 aa15.87■□□□□ 0.13
HNRNPU-228ENST00000640306 MVDP53602 400 aa15.87■□□□□ 0.13
HNRNPU-228ENST00000640306 STARD3Q14849 445 aa15.87■□□□□ 0.13
HNRNPU-228ENST00000640306 C6orf183Q5T699 404 aa15.87■□□□□ 0.13
HNRNPU-228ENST00000640306 CCBE1Q6UXH8 406 aaPredicted RBP15.87■□□□□ 0.13
HNRNPU-228ENST00000640306 CRIPAKQ8N1N5 446 aa15.87■□□□□ 0.13
HNRNPU-228ENST00000640306 SCAIQ8N9R8 606 aa15.87■□□□□ 0.13
HNRNPU-228ENST00000640306 WDR48Q8TAF3 677 aa15.87■□□□□ 0.13
HNRNPU-228ENST00000640306 FCGR1BQ92637 280 aa15.87■□□□□ 0.13
HNRNPU-228ENST00000640306 TMEM169Q96HH4 297 aa15.87■□□□□ 0.13
HNRNPU-228ENST00000640306 FCRL1Q96LA6 429 aa15.87■□□□□ 0.13
HNRNPU-228ENST00000640306 PKP4Q99569 1192 aa15.87■□□□□ 0.13
HNRNPU-228ENST00000640306 C11orf16Q9NQ32 467 aa15.87■□□□□ 0.13
HNRNPU-228ENST00000640306 CCL26Q9Y258 94 aa15.87■□□□□ 0.13
HNRNPU-228ENST00000640306 CFAP20Q9Y6A4 193 aaKnown RBP15.87■□□□□ 0.13
HNRNPU-228ENST00000640306 PLXNB3Q9ULL4 1909 aa15.87■□□□□ 0.13
HNRNPU-228ENST00000640306 H3BM21 787 aa15.87■□□□□ 0.13
HNRNPU-228ENST00000640306 RGS5O15539 181 aa15.87■□□□□ 0.13
HNRNPU-228ENST00000640306 PRMT3O60678 531 aa15.87■□□□□ 0.13
HNRNPU-228ENST00000640306 SOX14O95416 240 aa15.87■□□□□ 0.13
HNRNPU-228ENST00000640306 CKMT1AP12532 417 aa15.87■□□□□ 0.13
HNRNPU-228ENST00000640306 IMPA1P29218 277 aa15.87■□□□□ 0.13
HNRNPU-228ENST00000640306 CHI3L1P36222 383 aaPredicted RBP15.87■□□□□ 0.13
HNRNPU-228ENST00000640306 MPPE1Q53F39 396 aa15.87■□□□□ 0.13
HNRNPU-228ENST00000640306 TMEM25Q86YD3 366 aa15.87■□□□□ 0.13
HNRNPU-228ENST00000640306 RAVER1Q8IY67 606 aaKnown RBP15.87■□□□□ 0.13
HNRNPU-228ENST00000640306 FIBINQ8TAL6 211 aa15.87■□□□□ 0.13
HNRNPU-228ENST00000640306 ECHDC3Q96DC8 303 aa15.87■□□□□ 0.13
HNRNPU-228ENST00000640306 YIPF2Q9BWQ6 316 aa15.87■□□□□ 0.13
HNRNPU-228ENST00000640306 ZNF556Q9HAH1 456 aa15.87■□□□□ 0.13
HNRNPU-228ENST00000640306 WDR70Q9NW82 654 aa15.87■□□□□ 0.13
HNRNPU-228ENST00000640306 MYO7AQ13402 2215 aa15.86■□□□□ 0.13
HNRNPU-228ENST00000640306 NEDD8-MDP1E9PL57 170 aa15.86■□□□□ 0.13
HNRNPU-228ENST00000640306 HOXA2O43364 376 aa15.86■□□□□ 0.13
HNRNPU-228ENST00000640306 CHRM5P08912 532 aaPredicted RBP15.86■□□□□ 0.13
HNRNPU-228ENST00000640306 ZNF8P17098 575 aaPredicted RBP15.86■□□□□ 0.13
HNRNPU-228ENST00000640306 LRRC74AQ0VAA2 488 aa15.86■□□□□ 0.13
HNRNPU-228ENST00000640306 PTGES3Q15185 160 aaKnown RBP15.86■□□□□ 0.13
HNRNPU-228ENST00000640306 SLC5A12Q1EHB4 618 aa15.86■□□□□ 0.13
HNRNPU-228ENST00000640306 MICAQ29983 383 aa15.86■□□□□ 0.13
HNRNPU-228ENST00000640306 KLHL17Q6TDP4 642 aa15.86■□□□□ 0.13
HNRNPU-228ENST00000640306 AQP11Q8NBQ7 271 aa15.86■□□□□ 0.13
HNRNPU-228ENST00000640306 VANGL1Q8TAA9 524 aaPredicted RBP15.86■□□□□ 0.13
HNRNPU-228ENST00000640306 COL21A1Q96P44 957 aa15.86■□□□□ 0.13
HNRNPU-228ENST00000640306 MCCC1Q96RQ3 725 aaPredicted RBP15.86■□□□□ 0.13
HNRNPU-228ENST00000640306 SCN5AQ14524 2016 aa15.86■□□□□ 0.13
HNRNPU-228ENST00000640306 UNC80Q8N2C7 3258 aa15.86■□□□□ 0.13
HNRNPU-228ENST00000640306 ASNA1O43681 348 aa15.86■□□□□ 0.13
HNRNPU-228ENST00000640306 TIA1P31483 386 aaKnown RBP eCLIP15.86■□□□□ 0.132e-6■■■□□ 15.8
HNRNPU-228ENST00000640306 CSNK1DP48730 415 aa15.86■□□□□ 0.13
HNRNPU-228ENST00000640306 TGM4P49221 684 aa15.86■□□□□ 0.13
HNRNPU-228ENST00000640306 SP140Q13342 867 aa15.86■□□□□ 0.13
HNRNPU-228ENST00000640306 LRIT3Q3SXY7 679 aa15.86■□□□□ 0.13
HNRNPU-228ENST00000640306 GCNT6Q5T4J0 391 aa15.86■□□□□ 0.13
HNRNPU-228ENST00000640306 GDPD3Q7L5L3 318 aa15.86■□□□□ 0.13
HNRNPU-228ENST00000640306 BCDIN3DQ7Z5W3 292 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms