RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 MLYCDO95822 493 aa15.8■□□□□ 0.12
SMN2-216ENST00000638794 SP1P08047 785 aa15.8■□□□□ 0.12
SMN2-216ENST00000638794 ESRRAP11474 423 aaPredicted RBP15.8■□□□□ 0.12
SMN2-216ENST00000638794 MAOAP21397 527 aa15.8■□□□□ 0.12
SMN2-216ENST00000638794 SAT1P21673 171 aa15.8■□□□□ 0.12
SMN2-216ENST00000638794 TPP2P29144 1249 aaPredicted RBP15.8■□□□□ 0.12
SMN2-216ENST00000638794 ZNF630Q2M218 657 aaPredicted RBP15.8■□□□□ 0.12
SMN2-216ENST00000638794 KRTCAP3Q53RY4 240 aa15.8■□□□□ 0.12
SMN2-216ENST00000638794 SLC25A25Q6KCM7 469 aa15.8■□□□□ 0.12
SMN2-216ENST00000638794 NXPE4Q6UWF7 544 aa15.8■□□□□ 0.12
SMN2-216ENST00000638794 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.8■□□□□ 0.12
SMN2-216ENST00000638794 SPPL2CQ8IUH8 684 aa15.8■□□□□ 0.12
SMN2-216ENST00000638794 SIAH3Q8IW03 269 aa15.8■□□□□ 0.12
SMN2-216ENST00000638794 AIF1LQ9BQI0 150 aa15.8■□□□□ 0.12
SMN2-216ENST00000638794 KLHL31Q9H511 634 aa15.8■□□□□ 0.12
SMN2-216ENST00000638794 SLC22A14Q9Y267 594 aa15.8■□□□□ 0.12
SMN2-216ENST00000638794 PSAT1Q9Y617 370 aa15.8■□□□□ 0.12
SMN2-216ENST00000638794 TEP1Q99973 2627 aaKnown RBP15.8■□□□□ 0.12
SMN2-216ENST00000638794 IGKV3D-11A0A0A0MRZ8 115 aa15.79■□□□□ 0.12
SMN2-216ENST00000638794 TCRBV16S1A1N1A0A5B0 115 aa15.79■□□□□ 0.12
SMN2-216ENST00000638794 URADA6NGE7 173 aa15.79■□□□□ 0.12
SMN2-216ENST00000638794 SAGE2PA6NJ88 616 aa15.79■□□□□ 0.12
SMN2-216ENST00000638794 C4orf51C9J302 202 aa15.79■□□□□ 0.12
SMN2-216ENST00000638794 ZSCAN12O43309 604 aa15.79■□□□□ 0.12
SMN2-216ENST00000638794 SLC25A12O75746 678 aa15.79■□□□□ 0.12
SMN2-216ENST00000638794 SMIM10L1P0DMW3 83 aa15.79■□□□□ 0.12
SMN2-216ENST00000638794 ZNF460Q14592 562 aa15.79■□□□□ 0.12
SMN2-216ENST00000638794 RBBP5Q15291 538 aaKnown RBP15.79■□□□□ 0.12
SMN2-216ENST00000638794 MAPKAPK3Q16644 382 aa15.79■□□□□ 0.12
SMN2-216ENST00000638794 XKRXQ6PP77 449 aa15.79■□□□□ 0.12
SMN2-216ENST00000638794 Q6ZPB1 254 aaPredicted RBP15.79■□□□□ 0.12
SMN2-216ENST00000638794 ZNF227Q86WZ6 799 aa15.79■□□□□ 0.12
SMN2-216ENST00000638794 ANKMY2Q8IV38 441 aa15.79■□□□□ 0.12
SMN2-216ENST00000638794 FAM98AQ8NCA5 519 aaKnown RBP15.79■□□□□ 0.12
SMN2-216ENST00000638794 TRPV3Q8NET8 790 aa15.79■□□□□ 0.12
SMN2-216ENST00000638794 LRRC39Q96DD0 335 aa15.79■□□□□ 0.12
SMN2-216ENST00000638794 SMIM10Q96HG1 83 aa15.79■□□□□ 0.12
SMN2-216ENST00000638794 AICDAQ9GZX7 198 aa15.79■□□□□ 0.12
SMN2-216ENST00000638794 RHBGQ9H310 441 aa15.79■□□□□ 0.12
SMN2-216ENST00000638794 CLK4Q9HAZ1 481 aaKnown RBP15.79■□□□□ 0.12
SMN2-216ENST00000638794 CHST11Q9NPF2 352 aa15.79■□□□□ 0.12
SMN2-216ENST00000638794 ZFATQ9P243 1243 aa15.79■□□□□ 0.12
SMN2-216ENST00000638794 PSMD12O00232 456 aaPredicted RBP15.78■□□□□ 0.12
SMN2-216ENST00000638794 CDK2AP1O14519 115 aa15.78■□□□□ 0.12
SMN2-216ENST00000638794 ZNHIT1O43257 154 aa15.78■□□□□ 0.12
SMN2-216ENST00000638794 NME2P1O60361 137 aa15.78■□□□□ 0.12
SMN2-216ENST00000638794 SERPINA6P08185 405 aa15.78■□□□□ 0.12
SMN2-216ENST00000638794 SNRPB2P08579 225 aaKnown RBP15.78■□□□□ 0.12
SMN2-216ENST00000638794 RNH1P13489 461 aaKnown RBP15.78■□□□□ 0.12
SMN2-216ENST00000638794 TCP1P17987 556 aaKnown RBP15.78■□□□□ 0.12
SMN2-216ENST00000638794 NME2P22392 152 aa15.78■□□□□ 0.12
SMN2-216ENST00000638794 CYB561P49447 251 aa15.78■□□□□ 0.12
SMN2-216ENST00000638794 ITGA8P53708 1063 aa15.78■□□□□ 0.12
SMN2-216ENST00000638794 MLF1P58340 268 aa15.78■□□□□ 0.12
SMN2-216ENST00000638794 FRG1Q14331 258 aaKnown RBP15.78■□□□□ 0.12
SMN2-216ENST00000638794 TOR1AIP1Q5JTV8 583 aa15.78■□□□□ 0.12
SMN2-216ENST00000638794 RNFT1Q5M7Z0 435 aa15.78■□□□□ 0.12
SMN2-216ENST00000638794 ZC3HC1Q86WB0 502 aaKnown RBP15.78■□□□□ 0.12
SMN2-216ENST00000638794 KLHL7Q8IXQ5 586 aa15.78■□□□□ 0.12
SMN2-216ENST00000638794 CA13Q8N1Q1 262 aa15.78■□□□□ 0.12
SMN2-216ENST00000638794 CPSF7Q8N684 471 aaKnown RBP15.78■□□□□ 0.12
SMN2-216ENST00000638794 NFAM1Q8NET5 270 aaPredicted RBP15.78■□□□□ 0.12
SMN2-216ENST00000638794 ADAMTS18Q8TE60 1221 aa15.78■□□□□ 0.12
SMN2-216ENST00000638794 CREB3L4Q8TEY5 395 aa15.78■□□□□ 0.12
SMN2-216ENST00000638794 EGFL8Q99944 293 aa15.78■□□□□ 0.12
SMN2-216ENST00000638794 TRIM51Q9BSJ1 452 aa15.78■□□□□ 0.12
SMN2-216ENST00000638794 NECTIN3Q9NQS3 549 aa15.78■□□□□ 0.12
SMN2-216ENST00000638794 PRDM9Q9NQV7 894 aa15.78■□□□□ 0.12
SMN2-216ENST00000638794 TRMT1Q9NXH9 659 aaKnown RBP15.78■□□□□ 0.12
SMN2-216ENST00000638794 KCNE2Q9Y6J6 123 aa15.78■□□□□ 0.12
SMN2-216ENST00000638794 FAM95CA0A1B0GW59 222 aa15.77■□□□□ 0.12
SMN2-216ENST00000638794 A8MUA0 341 aa15.77■□□□□ 0.12
SMN2-216ENST00000638794 ASNA1O43681 348 aa15.77■□□□□ 0.12
SMN2-216ENST00000638794 ZNF24P17028 368 aa15.77■□□□□ 0.12
SMN2-216ENST00000638794 AGAP20933 346 aa15.77■□□□□ 0.12
SMN2-216ENST00000638794 PTGER4P35408 488 aa15.77■□□□□ 0.12
SMN2-216ENST00000638794 SMSP52788 366 aa15.77■□□□□ 0.12
SMN2-216ENST00000638794 ARL4CP56559 192 aa15.77■□□□□ 0.12
SMN2-216ENST00000638794 TAS2R39P59534 338 aa15.77■□□□□ 0.12
SMN2-216ENST00000638794 CDKL1Q00532 357 aa15.77■□□□□ 0.12
SMN2-216ENST00000638794 HSF1Q00613 529 aa15.77■□□□□ 0.12
SMN2-216ENST00000638794 DR1Q01658 176 aa15.77■□□□□ 0.12
SMN2-216ENST00000638794 FASTKD3Q14CZ7 662 aaKnown RBP15.77■□□□□ 0.12
SMN2-216ENST00000638794 CDSNQ15517 529 aa15.77■□□□□ 0.12
SMN2-216ENST00000638794 SYDE1Q6ZW31 735 aaPredicted RBP15.77■□□□□ 0.12
SMN2-216ENST00000638794 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.77■□□□□ 0.12
SMN2-216ENST00000638794 NKAPQ8N5F7 415 aaKnown RBP15.77■□□□□ 0.12
SMN2-216ENST00000638794 ANKRD49Q8WVL7 239 aa15.77■□□□□ 0.12
SMN2-216ENST00000638794 ANKRD7Q92527 254 aa15.77■□□□□ 0.12
SMN2-216ENST00000638794 CAPZA3Q96KX2 299 aa15.77■□□□□ 0.12
SMN2-216ENST00000638794 TRIM45Q9H8W5 580 aaPredicted RBP15.77■□□□□ 0.12
SMN2-216ENST00000638794 MEMO1Q9Y316 297 aa15.77■□□□□ 0.12
SMN2-216ENST00000638794 OARD1Q9Y530 152 aa15.77■□□□□ 0.12
SMN2-216ENST00000638794 AKAP9Q99996 3911 aa15.77■□□□□ 0.11
SMN2-216ENST00000638794 TP73O15350 636 aa15.76■□□□□ 0.11
SMN2-216ENST00000638794 SEC31AO94979 1220 aaKnown RBP15.76■□□□□ 0.11
SMN2-216ENST00000638794 COX6B1P14854 86 aa15.76■□□□□ 0.11
SMN2-216ENST00000638794 ABOP16442 354 aa15.76■□□□□ 0.11
SMN2-216ENST00000638794 ELAVL4P26378 380 aaKnown RBP15.76■□□□□ 0.11
SMN2-216ENST00000638794 TRHRP34981 398 aaPredicted RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms