RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 AIF1LQ9BQI0 150 aa17.31■□□□□ 0.36
CLN6-220ENST00000637450 KLHL31Q9H511 634 aa17.31■□□□□ 0.36
CLN6-220ENST00000637450 CHST11Q9NPF2 352 aa17.31■□□□□ 0.36
CLN6-220ENST00000637450 LRFN1Q9P244 771 aa17.31■□□□□ 0.36
CLN6-220ENST00000637450 NPIPA1Q9UND3 350 aa17.31■□□□□ 0.36
CLN6-220ENST00000637450 SLC22A14Q9Y267 594 aa17.31■□□□□ 0.36
CLN6-220ENST00000637450 PSAT1Q9Y617 370 aa17.31■□□□□ 0.36
CLN6-220ENST00000637450 KCNE2Q9Y6J6 123 aa17.31■□□□□ 0.36
CLN6-220ENST00000637450 FBN2P35556 2912 aa17.3■□□□□ 0.36
CLN6-220ENST00000637450 IGKV3D-11A0A0A0MRZ8 115 aa17.3■□□□□ 0.36
CLN6-220ENST00000637450 TCRBV16S1A1N1A0A5B0 115 aa17.3■□□□□ 0.36
CLN6-220ENST00000637450 CDC7O00311 574 aa17.3■□□□□ 0.36
CLN6-220ENST00000637450 SERPINA6P08185 405 aa17.3■□□□□ 0.36
CLN6-220ENST00000637450 ZNF37AP17032 561 aaPredicted RBP17.3■□□□□ 0.36
CLN6-220ENST00000637450 HNF4AP41235 474 aa17.3■□□□□ 0.36
CLN6-220ENST00000637450 ADORA2A-AS1P86434 159 aa17.3■□□□□ 0.36
CLN6-220ENST00000637450 CDKL1Q00532 357 aa17.3■□□□□ 0.36
CLN6-220ENST00000637450 RBBP5Q15291 538 aaKnown RBP17.3■□□□□ 0.36
CLN6-220ENST00000637450 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.3■□□□□ 0.36
CLN6-220ENST00000637450 CYP4X1Q8N118 509 aa17.3■□□□□ 0.36
CLN6-220ENST00000637450 FAM98AQ8NCA5 519 aaKnown RBP17.3■□□□□ 0.36
CLN6-220ENST00000637450 NFAM1Q8NET5 270 aaPredicted RBP17.3■□□□□ 0.36
CLN6-220ENST00000637450 ADAMTS18Q8TE60 1221 aa17.3■□□□□ 0.36
CLN6-220ENST00000637450 CREB3L4Q8TEY5 395 aa17.3■□□□□ 0.36
CLN6-220ENST00000637450 MAGED4Q96JG8 741 aa17.3■□□□□ 0.36
CLN6-220ENST00000637450 TSPAN10Q9H1Z9 355 aaPredicted RBP17.3■□□□□ 0.36
CLN6-220ENST00000637450 TRIM45Q9H8W5 580 aaPredicted RBP17.3■□□□□ 0.36
CLN6-220ENST00000637450 TRMT1Q9NXH9 659 aaKnown RBP17.3■□□□□ 0.36
CLN6-220ENST00000637450 TINAGQ9UJW2 476 aa17.3■□□□□ 0.36
CLN6-220ENST00000637450 SAGE2PA6NJ88 616 aa17.29■□□□□ 0.36
CLN6-220ENST00000637450 ASNA1O43681 348 aa17.29■□□□□ 0.36
CLN6-220ENST00000637450 SLC25A12O75746 678 aa17.29■□□□□ 0.36
CLN6-220ENST00000637450 ESRRAP11474 423 aaPredicted RBP17.29■□□□□ 0.36
CLN6-220ENST00000637450 RNH1P13489 461 aaKnown RBP17.29■□□□□ 0.36
CLN6-220ENST00000637450 AGAP20933 346 aa17.29■□□□□ 0.36
CLN6-220ENST00000637450 MAOAP21397 527 aa17.29■□□□□ 0.36
CLN6-220ENST00000637450 SAT1P21673 171 aa17.29■□□□□ 0.36
CLN6-220ENST00000637450 TPP2P29144 1249 aaPredicted RBP17.29■□□□□ 0.36
CLN6-220ENST00000637450 ARL4CP56559 192 aa17.29■□□□□ 0.36
CLN6-220ENST00000637450 MLF1P58340 268 aa17.29■□□□□ 0.36
CLN6-220ENST00000637450 TMPRSS11BQ86T26 416 aa17.29■□□□□ 0.36
CLN6-220ENST00000637450 ZC3HC1Q86WB0 502 aaKnown RBP17.29■□□□□ 0.36
CLN6-220ENST00000637450 KLHL7Q8IXQ5 586 aa17.29■□□□□ 0.36
CLN6-220ENST00000637450 AICDAQ9GZX7 198 aa17.29■□□□□ 0.36
CLN6-220ENST00000637450 NECTIN3Q9NQS3 549 aa17.29■□□□□ 0.36
CLN6-220ENST00000637450 PRDM9Q9NQV7 894 aa17.29■□□□□ 0.36
CLN6-220ENST00000637450 MOCS1Q9NZB8 636 aa17.29■□□□□ 0.36
CLN6-220ENST00000637450 ZFATQ9P243 1243 aa17.29■□□□□ 0.36
CLN6-220ENST00000637450 NPEPPSL1A6NEC2 478 aa17.28■□□□□ 0.36
CLN6-220ENST00000637450 C4orf51C9J302 202 aa17.28■□□□□ 0.36
CLN6-220ENST00000637450 PSMD12O00232 456 aaPredicted RBP17.28■□□□□ 0.36
CLN6-220ENST00000637450 TP73O15350 636 aa17.28■□□□□ 0.36
CLN6-220ENST00000637450 NME2P1O60361 137 aa17.28■□□□□ 0.36
CLN6-220ENST00000637450 NME2P22392 152 aa17.28■□□□□ 0.36
CLN6-220ENST00000637450 TRHRP34981 398 aaPredicted RBP17.28■□□□□ 0.36
CLN6-220ENST00000637450 CYB561P49447 251 aa17.28■□□□□ 0.36
CLN6-220ENST00000637450 HNMTP50135 292 aa17.28■□□□□ 0.36
CLN6-220ENST00000637450 ITGA8P53708 1063 aa17.28■□□□□ 0.36
CLN6-220ENST00000637450 TAS2R39P59534 338 aa17.28■□□□□ 0.36
CLN6-220ENST00000637450 DR1Q01658 176 aa17.28■□□□□ 0.36
CLN6-220ENST00000637450 MGAT5Q09328 741 aa17.28■□□□□ 0.36
CLN6-220ENST00000637450 MAPKAPK3Q16644 382 aa17.28■□□□□ 0.36
CLN6-220ENST00000637450 ZNF227Q86WZ6 799 aa17.28■□□□□ 0.36
CLN6-220ENST00000637450 CREG2Q8IUH2 290 aa17.28■□□□□ 0.36
CLN6-220ENST00000637450 ANKMY2Q8IV38 441 aa17.28■□□□□ 0.36
CLN6-220ENST00000637450 CA13Q8N1Q1 262 aa17.28■□□□□ 0.36
CLN6-220ENST00000637450 ARMC10Q8N2F6 343 aa17.28■□□□□ 0.36
CLN6-220ENST00000637450 RUNDC3BQ96NL0 473 aa17.28■□□□□ 0.36
CLN6-220ENST00000637450 TRIM51Q9BSJ1 452 aa17.28■□□□□ 0.36
CLN6-220ENST00000637450 RHBGQ9H310 441 aa17.28■□□□□ 0.36
CLN6-220ENST00000637450 OARD1Q9Y530 152 aa17.28■□□□□ 0.36
CLN6-220ENST00000637450 PCNX1Q96RV3 2341 aa17.28■□□□□ 0.36
CLN6-220ENST00000637450 OTOGQ6ZRI0 2925 aa17.27■□□□□ 0.36
CLN6-220ENST00000637450 FAM95CA0A1B0GW59 222 aa17.27■□□□□ 0.36
CLN6-220ENST00000637450 A8MUA0 341 aa17.27■□□□□ 0.36
CLN6-220ENST00000637450 SEC31AO94979 1220 aaKnown RBP17.27■□□□□ 0.36
CLN6-220ENST00000637450 PTGER4P35408 488 aa17.27■□□□□ 0.36
CLN6-220ENST00000637450 HLCSP50747 726 aa17.27■□□□□ 0.36
CLN6-220ENST00000637450 SMSP52788 366 aa17.27■□□□□ 0.36
CLN6-220ENST00000637450 ZNF460Q14592 562 aa17.27■□□□□ 0.36
CLN6-220ENST00000637450 TOR1AIP1Q5JTV8 583 aa17.27■□□□□ 0.36
CLN6-220ENST00000637450 RNFT1Q5M7Z0 435 aa17.27■□□□□ 0.36
CLN6-220ENST00000637450 GHDCQ8N2G8 530 aa17.27■□□□□ 0.36
CLN6-220ENST00000637450 ARMC2Q8NEN0 867 aa17.27■□□□□ 0.36
CLN6-220ENST00000637450 ANKRD49Q8WVL7 239 aa17.27■□□□□ 0.36
CLN6-220ENST00000637450 CAPZA3Q96KX2 299 aa17.27■□□□□ 0.36
CLN6-220ENST00000637450 EGFL8Q99944 293 aa17.27■□□□□ 0.36
CLN6-220ENST00000637450 DEFB126Q9BYW3 111 aa17.27■□□□□ 0.36
CLN6-220ENST00000637450 MEMO1Q9Y316 297 aa17.27■□□□□ 0.36
CLN6-220ENST00000637450 H2AFYO75367 372 aaKnown RBP17.26■□□□□ 0.35
CLN6-220ENST00000637450 C1GALT1C1LP0DN25 315 aa17.26■□□□□ 0.35
CLN6-220ENST00000637450 GNAZP19086 355 aa17.26■□□□□ 0.35
CLN6-220ENST00000637450 GDF5P43026 501 aa17.26■□□□□ 0.35
CLN6-220ENST00000637450 SLC6A12P48065 614 aa17.26■□□□□ 0.35
CLN6-220ENST00000637450 BTN3A2P78410 334 aa17.26■□□□□ 0.35
CLN6-220ENST00000637450 PDIA2Q13087 525 aaKnown RBP17.26■□□□□ 0.35
CLN6-220ENST00000637450 C18orf21Q32NC0 220 aaPredicted RBP17.26■□□□□ 0.35
CLN6-220ENST00000637450 SLCO4C1Q6ZQN7 724 aa17.26■□□□□ 0.35
CLN6-220ENST00000637450 CEP97Q8IW35 865 aa17.26■□□□□ 0.35
CLN6-220ENST00000637450 CHERPQ8IWX8 916 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms