RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 SPEGQ15772 3267 aa16.57■□□□□ 0.24
PPFIA3-207ENST00000602716 TCRBV3S1A0A5B6 114 aa16.56■□□□□ 0.24
PPFIA3-207ENST00000602716 TRBC2A0A5B9 178 aa16.56■□□□□ 0.24
PPFIA3-207ENST00000602716 OR2A25A4D2G3 310 aa16.56■□□□□ 0.24
PPFIA3-207ENST00000602716 RTCAO00442 366 aaKnown RBP16.56■□□□□ 0.24
PPFIA3-207ENST00000602716 NR5A2O00482 541 aa16.56■□□□□ 0.24
PPFIA3-207ENST00000602716 GBAP04062 536 aa16.56■□□□□ 0.24
PPFIA3-207ENST00000602716 PROS1P07225 676 aa16.56■□□□□ 0.24
PPFIA3-207ENST00000602716 HSD3B1P14060 373 aa16.56■□□□□ 0.24
PPFIA3-207ENST00000602716 HSD3B2P26439 372 aa16.56■□□□□ 0.24
PPFIA3-207ENST00000602716 PIK3CBP42338 1070 aa16.56■□□□□ 0.24
PPFIA3-207ENST00000602716 ACADVLP49748 655 aa16.56■□□□□ 0.24
PPFIA3-207ENST00000602716 BIRC2Q13490 618 aa16.56■□□□□ 0.24
PPFIA3-207ENST00000602716 PDCD4Q53EL6 469 aaKnown RBP16.56■□□□□ 0.24
PPFIA3-207ENST00000602716 SLC23A3Q6PIS1 610 aa16.56■□□□□ 0.24
PPFIA3-207ENST00000602716 KRTCAP2Q8N6L1 136 aa16.56■□□□□ 0.24
PPFIA3-207ENST00000602716 PROKR1Q8TCW9 393 aa16.56■□□□□ 0.24
PPFIA3-207ENST00000602716 CREB3L4Q8TEY5 395 aa16.56■□□□□ 0.24
PPFIA3-207ENST00000602716 SLCO4A1Q96BD0 722 aa16.56■□□□□ 0.24
PPFIA3-207ENST00000602716 SLC22A18Q96BI1 424 aa16.56■□□□□ 0.24
PPFIA3-207ENST00000602716 DGCR14Q96DF8 476 aaKnown RBP16.56■□□□□ 0.24
PPFIA3-207ENST00000602716 TSSK3Q96PN8 268 aa16.56■□□□□ 0.24
PPFIA3-207ENST00000602716 F2RL3Q96RI0 385 aa16.56■□□□□ 0.24
PPFIA3-207ENST00000602716 COL25A1Q9BXS0 654 aaPredicted RBP16.56■□□□□ 0.24
PPFIA3-207ENST00000602716 LRIT1Q9P2V4 623 aa16.56■□□□□ 0.24
PPFIA3-207ENST00000602716 SLC6A14Q9UN76 642 aa16.56■□□□□ 0.24
PPFIA3-207ENST00000602716 TSC22D4Q9Y3Q8 395 aa16.56■□□□□ 0.24
PPFIA3-207ENST00000602716 PCDHGA4Q9Y5G9 962 aa16.56■□□□□ 0.24
PPFIA3-207ENST00000602716 PI4KAP42356 2102 aa16.56■□□□□ 0.24
PPFIA3-207ENST00000602716 HCRTR1O43613 425 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 EPN2O95208 641 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 FAM58BPP0C7Q3 252 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 ST6GAL1P15907 406 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 OR1D5P58170 312 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 ZNF33BQ06732 778 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 SAMD4BQ5PRF9 694 aaKnown RBP16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 C6orf10Q5SRN2 563 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 NOXRED1Q6NXP6 359 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 VN1R4Q7Z5H5 301 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 METTL25Q8N6Q8 603 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 CHTF18Q8WVB6 975 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 UBE2E3Q969T4 207 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 EME1Q96AY2 570 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 GTPBP2Q9BX10 602 aaKnown RBP16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 ZNF717Q9BY31 904 aaPredicted RBP16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 UCK1Q9HA47 277 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 ASIC5Q9NY37 505 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 NLGN3Q9NZ94 848 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 CROTQ9UKG9 612 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 ZNF318Q5VUA4 2279 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 A0A0G2JN53 185 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 A0A0J9YY10 115 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 ANKDD1BA6NHY2 528 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 RHPN2P1A8MT19 583 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 ARHGAP33O14559 1287 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 KLHL18O94889 574 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 SERPIND1P05546 499 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 CXCR2P25025 360 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 ALDH4A1P30038 563 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 MRPL19P49406 292 aaKnown RBP16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 ACSM2AQ08AH3 577 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 HYAL2Q12891 473 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 APOFQ13790 326 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 SLC5A12Q1EHB4 618 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 ACSM2BQ68CK6 577 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 ZC3H14Q6PJT7 736 aaKnown RBP16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 FIGLAQ6QHK4 219 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 ISLR2Q6UXK2 745 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 COMMD6Q7Z4G1 85 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 LRTOMTQ8WZ04 291 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 ZNF597Q96LX8 424 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 NT5DC2Q9H857 520 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 SLC52A3Q9NQ40 469 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 LHX9Q9NQ69 397 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 ENTPD2Q9Y5L3 495 aa16.55■□□□□ 0.24
PPFIA3-207ENST00000602716 HEATR5BQ9P2D3 2071 aa16.54■□□□□ 0.24
PPFIA3-207ENST00000602716 ASPDHA6ND91 283 aa16.54■□□□□ 0.24
PPFIA3-207ENST00000602716 PLPP1O14494 284 aa16.54■□□□□ 0.24
PPFIA3-207ENST00000602716 ZW10O43264 779 aa16.54■□□□□ 0.24
PPFIA3-207ENST00000602716 SIGLEC6O43699 453 aa16.54■□□□□ 0.24
PPFIA3-207ENST00000602716 SLC7A1P30825 629 aa16.54■□□□□ 0.24
PPFIA3-207ENST00000602716 CCT8P50990 548 aa16.54■□□□□ 0.24
PPFIA3-207ENST00000602716 SH3BGRP55822 239 aaPredicted RBP16.54■□□□□ 0.24
PPFIA3-207ENST00000602716 RPS6KA2Q15349 733 aa16.54■□□□□ 0.24
PPFIA3-207ENST00000602716 FAM92BQ6ZTR7 304 aa16.54■□□□□ 0.24
PPFIA3-207ENST00000602716 RETREG3Q86VR2 466 aa16.54■□□□□ 0.24
PPFIA3-207ENST00000602716 CHERPQ8IWX8 916 aaKnown RBP16.54■□□□□ 0.24
PPFIA3-207ENST00000602716 OR4C6Q8NH72 309 aa16.54■□□□□ 0.24
PPFIA3-207ENST00000602716 CEP76Q8TAP6 659 aa16.54■□□□□ 0.24
PPFIA3-207ENST00000602716 VPS33AQ96AX1 596 aa16.54■□□□□ 0.24
PPFIA3-207ENST00000602716 KLHL31Q9H511 634 aa16.54■□□□□ 0.24
PPFIA3-207ENST00000602716 COQ10BQ9H8M1 238 aa16.54■□□□□ 0.24
PPFIA3-207ENST00000602716 SNX7Q9UNH6 387 aa16.54■□□□□ 0.24
PPFIA3-207ENST00000602716 EIF3LQ9Y262 564 aaKnown RBP16.54■□□□□ 0.24
PPFIA3-207ENST00000602716 CABIN1Q9Y6J0 2220 aa16.54■□□□□ 0.24
PPFIA3-207ENST00000602716 A0A0J9YVX5 310 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 C7orf72A4D263 438 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 P2RX6O15547 441 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 TNFSF14O43557 240 aa16.53■□□□□ 0.24
PPFIA3-207ENST00000602716 LRATO95237 230 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms