RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 VSX2P58304 361 aaPredicted RBP21.5■■□□□ 1.03
IRF3-228ENST00000601291 CCL7P80098 99 aa21.5■■□□□ 1.03
IRF3-228ENST00000601291 CLPPQ16740 277 aaPredicted RBP21.5■■□□□ 1.03
IRF3-228ENST00000601291 HKDC1Q2TB90 917 aa21.5■■□□□ 1.03
IRF3-228ENST00000601291 DEFB110Q30KQ9 67 aa21.5■■□□□ 1.03
IRF3-228ENST00000601291 SNAP47Q5SQN1 464 aa21.5■■□□□ 1.03
IRF3-228ENST00000601291 ABHD17CQ6PCB6 329 aa21.5■■□□□ 1.03
IRF3-228ENST00000601291 ABHD13Q7L211 337 aa21.5■■□□□ 1.03
IRF3-228ENST00000601291 UBE3DQ7Z6J8 389 aa21.5■■□□□ 1.03
IRF3-228ENST00000601291 TMEM132CQ8N3T6 1108 aa21.5■■□□□ 1.03
IRF3-228ENST00000601291 KRTCAP2Q8N6L1 136 aa21.5■■□□□ 1.03
IRF3-228ENST00000601291 KCT2Q8NC54 265 aa21.5■■□□□ 1.03
IRF3-228ENST00000601291 KLHL29Q96CT2 875 aa21.5■■□□□ 1.03
IRF3-228ENST00000601291 RCN3Q96D15 328 aa21.5■■□□□ 1.03
IRF3-228ENST00000601291 EGLN2Q96KS0 407 aa21.5■■□□□ 1.03
IRF3-228ENST00000601291 TMEM74Q96NL1 305 aa21.5■■□□□ 1.03
IRF3-228ENST00000601291 ROGDIQ9GZN7 287 aa21.5■■□□□ 1.03
IRF3-228ENST00000601291 AICDAQ9GZX7 198 aa21.5■■□□□ 1.03
IRF3-228ENST00000601291 SYNDIG1Q9H7V2 258 aa21.5■■□□□ 1.03
IRF3-228ENST00000601291 DDX31Q9H8H2 851 aaKnown RBP21.5■■□□□ 1.03
IRF3-228ENST00000601291 COPS7BQ9H9Q2 264 aaPredicted RBP21.5■■□□□ 1.03
IRF3-228ENST00000601291 EFCAB1Q9HAE3 211 aa21.5■■□□□ 1.03
IRF3-228ENST00000601291 MYNNQ9NPC7 610 aa21.5■■□□□ 1.03
IRF3-228ENST00000601291 TMEM9BQ9NQ34 198 aa21.5■■□□□ 1.03
IRF3-228ENST00000601291 TMEM9Q9P0T7 183 aa21.5■■□□□ 1.03
IRF3-228ENST00000601291 FTSJ1Q9UET6 329 aa21.5■■□□□ 1.03
IRF3-228ENST00000601291 PLCL2Q9UPR0 1127 aa21.5■■□□□ 1.03
IRF3-228ENST00000601291 NDUFAF1Q9Y375 327 aa21.5■■□□□ 1.03
IRF3-228ENST00000601291 SH3BP5O60239 455 aa21.49■■□□□ 1.03
IRF3-228ENST00000601291 EEDO75530 441 aaKnown RBP21.49■■□□□ 1.03
IRF3-228ENST00000601291 IL6P05231 212 aa21.49■■□□□ 1.03
IRF3-228ENST00000601291 CAPN3P20807 821 aa21.49■■□□□ 1.03
IRF3-228ENST00000601291 HPCAL1P37235 193 aa21.49■■□□□ 1.03
IRF3-228ENST00000601291 ZFP36L2P47974 494 aaKnown RBP21.49■■□□□ 1.03
IRF3-228ENST00000601291 C21orf58P58505 322 aa21.49■■□□□ 1.03
IRF3-228ENST00000601291 HSD11B2P80365 405 aa21.49■■□□□ 1.03
IRF3-228ENST00000601291 CSRP2Q16527 193 aa21.49■■□□□ 1.03
IRF3-228ENST00000601291 DPY19L1Q2PZI1 675 aa21.49■■□□□ 1.03
IRF3-228ENST00000601291 VPS26BQ4G0F5 336 aa21.49■■□□□ 1.03
IRF3-228ENST00000601291 IKBIPQ70UQ0 350 aa21.49■■□□□ 1.03
IRF3-228ENST00000601291 N4BP2L2Q92802 583 aaPredicted RBP21.49■■□□□ 1.03
IRF3-228ENST00000601291 TESCQ96BS2 214 aa21.49■■□□□ 1.03
IRF3-228ENST00000601291 SLC7A6OSQ96CW6 309 aaPredicted RBP21.49■■□□□ 1.03
IRF3-228ENST00000601291 LRMDAQ9H2I8 198 aa21.49■■□□□ 1.03
IRF3-228ENST00000601291 LHX9Q9NQ69 397 aa21.49■■□□□ 1.03
IRF3-228ENST00000601291 SEMA5BQ9P283 1151 aa21.49■■□□□ 1.03
IRF3-228ENST00000601291 WBP11Q9Y2W2 641 aaKnown RBP21.49■■□□□ 1.03
IRF3-228ENST00000601291 CABIN1Q9Y6J0 2220 aa21.49■■□□□ 1.03
IRF3-228ENST00000601291 A0A088AWK7 358 aa21.48■■□□□ 1.03
IRF3-228ENST00000601291 A0A1W2PP18 115 aa21.48■■□□□ 1.03
IRF3-228ENST00000601291 CDX4O14627 284 aaPredicted RBP21.48■■□□□ 1.03
IRF3-228ENST00000601291 AIM2O14862 343 aa21.48■■□□□ 1.03
IRF3-228ENST00000601291 CFLARO15519 480 aa21.48■■□□□ 1.03
IRF3-228ENST00000601291 LRATO95237 230 aa21.48■■□□□ 1.03
IRF3-228ENST00000601291 LMNAP02545 664 aaKnown RBP21.48■■□□□ 1.03
IRF3-228ENST00000601291 ZNF10P21506 573 aaPredicted RBP21.48■■□□□ 1.03
IRF3-228ENST00000601291 RPL3P39023 403 aaKnown RBP21.48■■□□□ 1.03
IRF3-228ENST00000601291 NUDT2P50583 147 aa21.48■■□□□ 1.03
IRF3-228ENST00000601291 TIGD2Q4W5G0 525 aa21.48■■□□□ 1.03
IRF3-228ENST00000601291 COQ5Q5HYK3 327 aa21.48■■□□□ 1.03
IRF3-228ENST00000601291 TMTC4Q5T4D3 741 aa21.48■■□□□ 1.03
IRF3-228ENST00000601291 REP15Q6BDI9 236 aa21.48■■□□□ 1.03
IRF3-228ENST00000601291 RINLQ6ZS11 566 aa21.48■■□□□ 1.03
IRF3-228ENST00000601291 RIMKLAQ8IXN7 391 aa21.48■■□□□ 1.03
IRF3-228ENST00000601291 PCYOX1LQ8NBM8 494 aa21.48■■□□□ 1.03
IRF3-228ENST00000601291 C16orf78Q8WTQ4 265 aa21.48■■□□□ 1.03
IRF3-228ENST00000601291 TEFMQ96QE5 360 aaKnown RBP21.48■■□□□ 1.03
IRF3-228ENST00000601291 BTBD10Q9BSF8 475 aa21.48■■□□□ 1.03
IRF3-228ENST00000601291 C1orf21Q9H246 121 aa21.48■■□□□ 1.03
IRF3-228ENST00000601291 NDE1Q9NXR1 346 aa21.48■■□□□ 1.03
IRF3-228ENST00000601291 ATXN7L1Q9ULK2 861 aaPredicted RBP21.48■■□□□ 1.03
IRF3-228ENST00000601291 ARID1BQ8NFD5 2236 aaPredicted RBP21.48■■□□□ 1.03
IRF3-228ENST00000601291 A0A0G2JN53 185 aa21.48■■□□□ 1.03
IRF3-228ENST00000601291 A0A1W2PQM1 296 aa21.48■■□□□ 1.03
IRF3-228ENST00000601291 MRASO14807 208 aa21.48■■□□□ 1.03
IRF3-228ENST00000601291 GYG2O15488 501 aa21.48■■□□□ 1.03
IRF3-228ENST00000601291 AKAP10O43572 662 aa21.48■■□□□ 1.03
IRF3-228ENST00000601291 ZNF888P0CJ79 500 aaPredicted RBP21.48■■□□□ 1.03
IRF3-228ENST00000601291 HIST1H1TP22492 207 aaPredicted RBP21.48■■□□□ 1.03
IRF3-228ENST00000601291 NBL1P41271 181 aa21.48■■□□□ 1.03
IRF3-228ENST00000601291 SEPHS1P49903 392 aa21.48■■□□□ 1.03
IRF3-228ENST00000601291 TAS2R50P59544 299 aa21.48■■□□□ 1.03
IRF3-228ENST00000601291 RAB8AP61006 207 aa21.48■■□□□ 1.03
IRF3-228ENST00000601291 TRA2BP62995 288 aaKnown RBP21.48■■□□□ 1.03
IRF3-228ENST00000601291 ART3Q13508 389 aa21.48■■□□□ 1.03
IRF3-228ENST00000601291 FAM174BQ3ZCQ3 159 aa21.48■■□□□ 1.03
IRF3-228ENST00000601291 ZCCHC7Q8N3Z6 543 aaKnown RBP21.48■■□□□ 1.03
IRF3-228ENST00000601291 RBM15BQ8NDT2 890 aaKnown RBP21.48■■□□□ 1.03
IRF3-228ENST00000601291 OR4D9Q8NGE8 314 aa21.48■■□□□ 1.03
IRF3-228ENST00000601291 ZCCHC10Q8TBK6 192 aa21.48■■□□□ 1.03
IRF3-228ENST00000601291 UTP15Q8TED0 518 aaKnown RBP21.48■■□□□ 1.03
IRF3-228ENST00000601291 GFM2Q969S9 779 aaKnown RBP21.48■■□□□ 1.03
IRF3-228ENST00000601291 PRPF18Q99633 342 aaKnown RBP21.48■■□□□ 1.03
IRF3-228ENST00000601291 NPAS2Q99743 824 aa21.48■■□□□ 1.03
IRF3-228ENST00000601291 PRDM7Q9NQW5 492 aa21.48■■□□□ 1.03
IRF3-228ENST00000601291 LEF1Q9UJU2 399 aaPredicted RBP21.48■■□□□ 1.03
IRF3-228ENST00000601291 A0A0A6YYD5 115 aa21.47■■□□□ 1.03
IRF3-228ENST00000601291 C4orf51C9J302 202 aa21.47■■□□□ 1.03
IRF3-228ENST00000601291 SCAMP2O15127 329 aaKnown RBP21.47■■□□□ 1.03
IRF3-228ENST00000601291 GP1BAP07359 652 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms