RNA–Protein interactions for RNA: ENST00000600935.1

NUP62-222, Transcript of nucleoporin 62, human

TSL 4

Gene NUP62, Length 587 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-222	ENST00000600935	TFR2	Q9UP52	801 aa		10.25	□□□□□ -0.77
NUP62-222	ENST00000600935	GTF3C3	Q9Y5Q9	886 aa		10.25	□□□□□ -0.77
NUP62-222	ENST00000600935		A8MUA0	341 aa		10.24	□□□□□ -0.77
NUP62-222	ENST00000600935		G3V3Y1	287 aa		10.24	□□□□□ -0.77
NUP62-222	ENST00000600935	ACOT7	O00154	380 aa		10.24	□□□□□ -0.77
NUP62-222	ENST00000600935	PSMD3	O43242	534 aa		10.24	□□□□□ -0.77
NUP62-222	ENST00000600935	CHST10	O43529	356 aa		10.24	□□□□□ -0.77
NUP62-222	ENST00000600935	SUSD5	O60279	629 aa		10.24	□□□□□ -0.77
NUP62-222	ENST00000600935	OR6B1	O95007	311 aa		10.24	□□□□□ -0.77
NUP62-222	ENST00000600935	CAT	P04040	527 aa	Known RBP	10.24	□□□□□ -0.77
NUP62-222	ENST00000600935	HRG	P04196	525 aa		10.24	□□□□□ -0.77
NUP62-222	ENST00000600935	BMP5	P22003	454 aa		10.24	□□□□□ -0.77
NUP62-222	ENST00000600935	ARNT	P27540	789 aa		10.24	□□□□□ -0.77
NUP62-222	ENST00000600935	IMPA1	P29218	277 aa		10.24	□□□□□ -0.77
NUP62-222	ENST00000600935	GPR143	P51810	404 aa		10.24	□□□□□ -0.77
NUP62-222	ENST00000600935	PLGLB1	Q02325	96 aa		10.24	□□□□□ -0.77
NUP62-222	ENST00000600935	FOXO1	Q12778	655 aa		10.24	□□□□□ -0.77
NUP62-222	ENST00000600935	XKR6	Q5GH73	641 aa		10.24	□□□□□ -0.77
NUP62-222	ENST00000600935	ASPG	Q86U10	573 aa		10.24	□□□□□ -0.77
NUP62-222	ENST00000600935	LUZP1	Q86V48	1076 aa		10.24	□□□□□ -0.77
NUP62-222	ENST00000600935	SLC22A16	Q86VW1	577 aa		10.24	□□□□□ -0.77
NUP62-222	ENST00000600935	REXO1L1P	Q8IX06	675 aa		10.24	□□□□□ -0.77
NUP62-222	ENST00000600935	FBXO15	Q8NCQ5	510 aa	Predicted RBP	10.24	□□□□□ -0.77
NUP62-222	ENST00000600935	B3GNT7	Q8NFL0	401 aa		10.24	□□□□□ -0.77
NUP62-222	ENST00000600935	LINC01560	Q8TB33	94 aa		10.24	□□□□□ -0.77
NUP62-222	ENST00000600935	SLC13A3	Q8WWT9	602 aa		10.24	□□□□□ -0.77
NUP62-222	ENST00000600935	LPGAT1	Q92604	370 aa		10.24	□□□□□ -0.77
NUP62-222	ENST00000600935	THAP11	Q96EK4	314 aa		10.24	□□□□□ -0.77
NUP62-222	ENST00000600935	SLC30A3	Q99726	388 aa		10.24	□□□□□ -0.77
NUP62-222	ENST00000600935	CHRAC1	Q9NRG0	131 aa		10.24	□□□□□ -0.77
NUP62-222	ENST00000600935	FAM114A2	Q9NRY5	505 aa		10.24	□□□□□ -0.77
NUP62-222	ENST00000600935	TREX1	Q9NSU2	369 aa		10.24	□□□□□ -0.77
NUP62-222	ENST00000600935	IFNK	Q9P0W0	207 aa		10.24	□□□□□ -0.77
NUP62-222	ENST00000600935	TRPS1	Q9UHF7	1281 aa		10.24	□□□□□ -0.77
NUP62-222	ENST00000600935	ACAD8	Q9UKU7	415 aa		10.24	□□□□□ -0.77
NUP62-222	ENST00000600935	PPIE	Q9UNP9	301 aa	Known RBP	10.24	□□□□□ -0.77
NUP62-222	ENST00000600935	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	10.24	□□□□□ -0.77
NUP62-222	ENST00000600935	TRIM64	A6NGJ6	449 aa		10.23	□□□□□ -0.77
NUP62-222	ENST00000600935	TRIM64B	A6NI03	449 aa		10.23	□□□□□ -0.77
NUP62-222	ENST00000600935	ZNF839	A8K0R7	811 aa		10.23	□□□□□ -0.77
NUP62-222	ENST00000600935	CLCA1	A8K7I4	914 aa		10.23	□□□□□ -0.77
NUP62-222	ENST00000600935	SMAD7	O15105	426 aa	Known RBP	10.23	□□□□□ -0.77
NUP62-222	ENST00000600935	JAK1	P23458	1154 aa		10.23	□□□□□ -0.77
NUP62-222	ENST00000600935	FMO4	P31512	558 aa		10.23	□□□□□ -0.77
NUP62-222	ENST00000600935	SKIV2L2	P42285	1042 aa	Known RBP	10.23	□□□□□ -0.77
NUP62-222	ENST00000600935	SSR4	P51571	173 aa		10.23	□□□□□ -0.77
NUP62-222	ENST00000600935	CLCN2	P51788	898 aa		10.23	□□□□□ -0.77
NUP62-222	ENST00000600935	PPP2R2B	Q00005	443 aa		10.23	□□□□□ -0.77
NUP62-222	ENST00000600935	HYAL2	Q12891	473 aa		10.23	□□□□□ -0.77
NUP62-222	ENST00000600935	HERC3	Q15034	1050 aa		10.23	□□□□□ -0.77
NUP62-222	ENST00000600935	RPS6KA1	Q15418	735 aa		10.23	□□□□□ -0.77
NUP62-222	ENST00000600935	HYAL4	Q2M3T9	481 aa		10.23	□□□□□ -0.77
NUP62-222	ENST00000600935	NDUFAF5	Q5TEU4	345 aa		10.23	□□□□□ -0.77
NUP62-222	ENST00000600935	CAPN13	Q6MZZ7	669 aa	Predicted RBP	10.23	□□□□□ -0.77
NUP62-222	ENST00000600935	SLC13A5	Q86YT5	568 aa	Predicted RBP	10.23	□□□□□ -0.77
NUP62-222	ENST00000600935	MPP5	Q8N3R9	675 aa		10.23	□□□□□ -0.77
NUP62-222	ENST00000600935	FAM109A	Q8N4B1	249 aa		10.23	□□□□□ -0.77
NUP62-222	ENST00000600935	ARMC2	Q8NEN0	867 aa		10.23	□□□□□ -0.77
NUP62-222	ENST00000600935	GIMAP7	Q8NHV1	300 aa		10.23	□□□□□ -0.77
NUP62-222	ENST00000600935	ALG3	Q92685	438 aa		10.23	□□□□□ -0.77
NUP62-222	ENST00000600935	CCDC42	Q96M95	316 aa		10.23	□□□□□ -0.77
NUP62-222	ENST00000600935		Q96MF0	132 aa		10.23	□□□□□ -0.77
NUP62-222	ENST00000600935	ANP32E	Q9BTT0	268 aa		10.23	□□□□□ -0.77
NUP62-222	ENST00000600935	LIN28A	Q9H9Z2	209 aa	Known RBP	10.23	□□□□□ -0.77
NUP62-222	ENST00000600935	ETNK1	Q9HBU6	452 aa		10.23	□□□□□ -0.77
NUP62-222	ENST00000600935	ABHD10	Q9NUJ1	306 aa		10.23	□□□□□ -0.77
NUP62-222	ENST00000600935	ANAPC5	Q9UJX4	755 aa		10.23	□□□□□ -0.77
NUP62-222	ENST00000600935	FBXW2	Q9UKT8	454 aa		10.23	□□□□□ -0.77
NUP62-222	ENST00000600935	DRG1	Q9Y295	367 aa	Known RBP	10.23	□□□□□ -0.77
NUP62-222	ENST00000600935	YARS2	Q9Y2Z4	477 aa	Known RBP	10.23	□□□□□ -0.77
NUP62-222	ENST00000600935	PCDHA3	Q9Y5H8	950 aa		10.23	□□□□□ -0.77
NUP62-222	ENST00000600935	CLDN16	Q9Y5I7	305 aa		10.23	□□□□□ -0.77
NUP62-222	ENST00000600935	TUBAL3	A6NHL2	446 aa		10.22	□□□□□ -0.77
NUP62-222	ENST00000600935	ERI2	A8K979	691 aa	Known RBP	10.22	□□□□□ -0.77
NUP62-222	ENST00000600935	HSPB2	A8KAH6	182 aa		10.22	□□□□□ -0.77
NUP62-222	ENST00000600935		A8MVJ9	347 aa		10.22	□□□□□ -0.77
NUP62-222	ENST00000600935	FAM47E-STBD1	D6RA91	191 aa		10.22	□□□□□ -0.77
NUP62-222	ENST00000600935	TGFBR3L	H3BV60	316 aa		10.22	□□□□□ -0.77
NUP62-222	ENST00000600935	GFY	I3L273	518 aa		10.22	□□□□□ -0.77
NUP62-222	ENST00000600935	ARHGEF9	O43307	516 aa		10.22	□□□□□ -0.77
NUP62-222	ENST00000600935	NDUFS3	O75489	264 aa		10.22	□□□□□ -0.77
NUP62-222	ENST00000600935	ZNF189	O75820	626 aa	Predicted RBP	10.22	□□□□□ -0.77
NUP62-222	ENST00000600935	OR2J2	O76002	312 aa		10.22	□□□□□ -0.77
NUP62-222	ENST00000600935	MYO1D	O94832	1006 aa		10.22	□□□□□ -0.77
NUP62-222	ENST00000600935	HRH2	P25021	359 aa		10.22	□□□□□ -0.77
NUP62-222	ENST00000600935	CEACAM8	P31997	349 aa	Predicted RBP	10.22	□□□□□ -0.77
NUP62-222	ENST00000600935	SOX3	P41225	446 aa		10.22	□□□□□ -0.77
NUP62-222	ENST00000600935	MAN2A2	P49641	1150 aa		10.22	□□□□□ -0.77
NUP62-222	ENST00000600935	CLCN7	P51798	805 aa		10.22	□□□□□ -0.77
NUP62-222	ENST00000600935	WNT3	P56703	355 aa		10.22	□□□□□ -0.77
NUP62-222	ENST00000600935	TBPL1	P62380	186 aa		10.22	□□□□□ -0.77
NUP62-222	ENST00000600935	MEF2A	Q02078	507 aa	Predicted RBP	10.22	□□□□□ -0.77
NUP62-222	ENST00000600935	POU4F3	Q15319	338 aa		10.22	□□□□□ -0.77
NUP62-222	ENST00000600935	HSPB2	Q16082	182 aa		10.22	□□□□□ -0.77
NUP62-222	ENST00000600935	DEFB134	Q4QY38	66 aa		10.22	□□□□□ -0.77
NUP62-222	ENST00000600935	WLS	Q5T9L3	541 aa		10.22	□□□□□ -0.77
NUP62-222	ENST00000600935	THEMIS2	Q5TEJ8	643 aa		10.22	□□□□□ -0.77
NUP62-222	ENST00000600935	MEI1	Q5TIA1	1274 aa		10.22	□□□□□ -0.77
NUP62-222	ENST00000600935	FBXW10	Q5XX13	1052 aa		10.22	□□□□□ -0.77
NUP62-222	ENST00000600935	IL20RB	Q6UXL0	311 aa		10.22	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms