RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 CTAGE15A4D2H0 777 aa12.84□□□□□ -0.35
HDAC5-208ENST00000588419 ASPDHA6ND91 283 aa12.84□□□□□ -0.35
HDAC5-208ENST00000588419 FCHO1O14526 889 aa12.84□□□□□ -0.35
HDAC5-208ENST00000588419 ASNA1O43681 348 aa12.84□□□□□ -0.35
HDAC5-208ENST00000588419 NME2P1O60361 137 aa12.84□□□□□ -0.35
HDAC5-208ENST00000588419 TTC4O95801 387 aa12.84□□□□□ -0.35
HDAC5-208ENST00000588419 TSPAN12O95859 305 aa12.84□□□□□ -0.35
HDAC5-208ENST00000588419 POU3F2P20265 443 aaPredicted RBP12.84□□□□□ -0.35
HDAC5-208ENST00000588419 NME2P22392 152 aa12.84□□□□□ -0.35
HDAC5-208ENST00000588419 PTGER1P34995 402 aa12.84□□□□□ -0.35
HDAC5-208ENST00000588419 SCTRP47872 440 aa12.84□□□□□ -0.35
HDAC5-208ENST00000588419 CYB561P49447 251 aa12.84□□□□□ -0.35
HDAC5-208ENST00000588419 MEOX1P50221 254 aa12.84□□□□□ -0.35
HDAC5-208ENST00000588419 AP1S2P56377 157 aa12.84□□□□□ -0.35
HDAC5-208ENST00000588419 REEP5Q00765 189 aa12.84□□□□□ -0.35
HDAC5-208ENST00000588419 QSOX2Q6ZRP7 698 aa12.84□□□□□ -0.35
HDAC5-208ENST00000588419 FRA10AC1Q70Z53 315 aa12.84□□□□□ -0.35
HDAC5-208ENST00000588419 CTAGE6Q86UF2 777 aa12.84□□□□□ -0.35
HDAC5-208ENST00000588419 THOC6Q86W42 341 aaKnown RBP12.84□□□□□ -0.35
HDAC5-208ENST00000588419 IGDCC3Q8IVU1 814 aa12.84□□□□□ -0.35
HDAC5-208ENST00000588419 CEP97Q8IW35 865 aa12.84□□□□□ -0.35
HDAC5-208ENST00000588419 AFAP1L2Q8N4X5 818 aa12.84□□□□□ -0.35
HDAC5-208ENST00000588419 ABHD11Q8NFV4 315 aa12.84□□□□□ -0.35
HDAC5-208ENST00000588419 ELP5Q8TE02 316 aa12.84□□□□□ -0.35
HDAC5-208ENST00000588419 UTP15Q8TED0 518 aaKnown RBP12.84□□□□□ -0.35
HDAC5-208ENST00000588419 PWWP2AQ96N64 755 aa12.84□□□□□ -0.35
HDAC5-208ENST00000588419 AIF1LQ9BQI0 150 aa12.84□□□□□ -0.35
HDAC5-208ENST00000588419 DEFB126Q9BYW3 111 aa12.84□□□□□ -0.35
HDAC5-208ENST00000588419 TRIM8Q9BZR9 551 aa12.84□□□□□ -0.35
HDAC5-208ENST00000588419 KLHL31Q9H511 634 aa12.84□□□□□ -0.35
HDAC5-208ENST00000588419 NECTIN3Q9NQS3 549 aa12.84□□□□□ -0.35
HDAC5-208ENST00000588419 FBXW2Q9UKT8 454 aa12.84□□□□□ -0.35
HDAC5-208ENST00000588419 PPT2Q9UMR5 302 aa12.84□□□□□ -0.35
HDAC5-208ENST00000588419 ZNF835Q9Y2P0 537 aa12.84□□□□□ -0.35
HDAC5-208ENST00000588419 URADA6NGE7 173 aa12.83□□□□□ -0.36
HDAC5-208ENST00000588419 C4orf51C9J302 202 aa12.83□□□□□ -0.36
HDAC5-208ENST00000588419 PRRG2O14669 202 aa12.83□□□□□ -0.36
HDAC5-208ENST00000588419 MYO1DO94832 1006 aa12.83□□□□□ -0.36
HDAC5-208ENST00000588419 TPOP07202 933 aa12.83□□□□□ -0.36
HDAC5-208ENST00000588419 RNH1P13489 461 aaKnown RBP12.83□□□□□ -0.36
HDAC5-208ENST00000588419 ELK3P41970 407 aa12.83□□□□□ -0.36
HDAC5-208ENST00000588419 GPR85P60893 370 aa12.83□□□□□ -0.36
HDAC5-208ENST00000588419 ZNF460Q14592 562 aa12.83□□□□□ -0.36
HDAC5-208ENST00000588419 RNFT1Q5M7Z0 435 aa12.83□□□□□ -0.36
HDAC5-208ENST00000588419 NIPAL1Q6NVV3 410 aa12.83□□□□□ -0.36
HDAC5-208ENST00000588419 TRMT10BQ6PF06 316 aaKnown RBP12.83□□□□□ -0.36
HDAC5-208ENST00000588419 Q6ZPB1 254 aaPredicted RBP12.83□□□□□ -0.36
HDAC5-208ENST00000588419 KIAA0408Q6ZU52 694 aa12.83□□□□□ -0.36
HDAC5-208ENST00000588419 SIAH3Q8IW03 269 aa12.83□□□□□ -0.36
HDAC5-208ENST00000588419 CNTN4Q8IWV2 1026 aa12.83□□□□□ -0.36
HDAC5-208ENST00000588419 LGI4Q8N135 537 aa12.83□□□□□ -0.36
HDAC5-208ENST00000588419 CA13Q8N1Q1 262 aa12.83□□□□□ -0.36
HDAC5-208ENST00000588419 ANKRD53Q8N9V6 530 aa12.83□□□□□ -0.36
HDAC5-208ENST00000588419 ARMC2Q8NEN0 867 aa12.83□□□□□ -0.36
HDAC5-208ENST00000588419 OR4K1Q8NGD4 311 aa12.83□□□□□ -0.36
HDAC5-208ENST00000588419 ADAMTS18Q8TE60 1221 aa12.83□□□□□ -0.36
HDAC5-208ENST00000588419 SDCCAG3Q96C92 435 aa12.83□□□□□ -0.36
HDAC5-208ENST00000588419 PDLIM2Q96JY6 352 aa12.83□□□□□ -0.36
HDAC5-208ENST00000588419 TRIM51Q9BSJ1 452 aa12.83□□□□□ -0.36
HDAC5-208ENST00000588419 PELI2Q9HAT8 420 aa12.83□□□□□ -0.36
HDAC5-208ENST00000588419 PRDM9Q9NQV7 894 aa12.83□□□□□ -0.36
HDAC5-208ENST00000588419 PNO1Q9NRX1 252 aaKnown RBP12.83□□□□□ -0.36
HDAC5-208ENST00000588419 SLC22A14Q9Y267 594 aa12.83□□□□□ -0.36
HDAC5-208ENST00000588419 PHF3Q92576 2039 aaKnown RBP12.83□□□□□ -0.36
HDAC5-208ENST00000588419 APCP25054 2843 aa12.82□□□□□ -0.36
HDAC5-208ENST00000588419 CDC7O00311 574 aa12.82□□□□□ -0.36
HDAC5-208ENST00000588419 WDR47O94967 919 aa12.82□□□□□ -0.36
HDAC5-208ENST00000588419 ENO2P09104 434 aaPredicted RBP12.82□□□□□ -0.36
HDAC5-208ENST00000588419 AHRP35869 848 aa12.82□□□□□ -0.36
HDAC5-208ENST00000588419 MLF1P58340 268 aa12.82□□□□□ -0.36
HDAC5-208ENST00000588419 BTN3A2P78410 334 aa12.82□□□□□ -0.36
HDAC5-208ENST00000588419 TEDDM1Q5T9Z0 273 aa12.82□□□□□ -0.36
HDAC5-208ENST00000588419 SBSNQ6UWP8 590 aa12.82□□□□□ -0.36
HDAC5-208ENST00000588419 CD163Q86VB7 1156 aa12.82□□□□□ -0.36
HDAC5-208ENST00000588419 ANKMY2Q8IV38 441 aa12.82□□□□□ -0.36
HDAC5-208ENST00000588419 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.82□□□□□ -0.362e-6■■■□□ 17.7
HDAC5-208ENST00000588419 CYP4Z2PQ8N1L4 340 aa12.82□□□□□ -0.36
HDAC5-208ENST00000588419 TMEM156Q8N614 296 aa12.82□□□□□ -0.36
HDAC5-208ENST00000588419 FAM47BQ8NA70 645 aa12.82□□□□□ -0.36
HDAC5-208ENST00000588419 TRPV3Q8NET8 790 aa12.82□□□□□ -0.36
HDAC5-208ENST00000588419 ACTRT1Q8TDG2 376 aa12.82□□□□□ -0.36
HDAC5-208ENST00000588419 CA5BP1Q8WTZ4 195 aa12.82□□□□□ -0.36
HDAC5-208ENST00000588419 CHTF18Q8WVB6 975 aa12.82□□□□□ -0.36
HDAC5-208ENST00000588419 FAR2Q96K12 515 aa12.82□□□□□ -0.36
HDAC5-208ENST00000588419 NAT9Q9BTE0 207 aa12.82□□□□□ -0.36
HDAC5-208ENST00000588419 KLF13Q9Y2Y9 288 aaPredicted RBP12.82□□□□□ -0.36
HDAC5-208ENST00000588419 VWA7Q9Y334 891 aa12.82□□□□□ -0.36
HDAC5-208ENST00000588419 ZNF407Q9C0G0 2248 aa12.82□□□□□ -0.36
HDAC5-208ENST00000588419 DNAJC13O75165 2243 aa12.81□□□□□ -0.36
HDAC5-208ENST00000588419 A0A1B0GTH9 108 aa12.81□□□□□ -0.36
HDAC5-208ENST00000588419 TCRBV16S1A1N1A0A5B0 115 aa12.81□□□□□ -0.36
HDAC5-208ENST00000588419 NCF1BA6NI72 391 aaPredicted RBP12.81□□□□□ -0.36
HDAC5-208ENST00000588419 NCF1CA8MVU1 366 aaPredicted RBP12.81□□□□□ -0.36
HDAC5-208ENST00000588419 HS6ST1O60243 411 aa12.81□□□□□ -0.36
HDAC5-208ENST00000588419 NCF1P14598 390 aaPredicted RBP12.81□□□□□ -0.36
HDAC5-208ENST00000588419 ZNF37AP17032 561 aaPredicted RBP12.81□□□□□ -0.36
HDAC5-208ENST00000588419 AGAP20933 346 aa12.81□□□□□ -0.36
HDAC5-208ENST00000588419 KIR3DL1P43629 444 aa12.81□□□□□ -0.36
HDAC5-208ENST00000588419 HLCSP50747 726 aa12.81□□□□□ -0.36
HDAC5-208ENST00000588419 CLCN2P51788 898 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms