RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 DHX29Q7Z478 1369 aaKnown RBP3.06□□□□□ -1.92
COPS3-217ENST00000583160 KDM5DQ9BY66 1539 aa3.06□□□□□ -1.92
COPS3-217ENST00000583160 KRTAP4-3Q9BYR4 195 aa3.06□□□□□ -1.92
COPS3-217ENST00000583160 KLK11Q9UBX7 282 aa3.06□□□□□ -1.92
COPS3-217ENST00000583160 VSIG4Q9Y279 399 aa3.06□□□□□ -1.92
COPS3-217ENST00000583160 KDM5AP29375 1690 aaKnown RBP3.05□□□□□ -1.92
COPS3-217ENST00000583160 DNMT1P26358 1616 aaKnown RBP3.05□□□□□ -1.92
COPS3-217ENST00000583160 CAMSAP1Q5T5Y3 1602 aa3.05□□□□□ -1.92
COPS3-217ENST00000583160 MYO3AQ8NEV4 1616 aa3.05□□□□□ -1.92
COPS3-217ENST00000583160 RNF17Q9BXT8 1623 aaKnown RBP3.05□□□□□ -1.92
COPS3-217ENST00000583160 TIAM1Q13009 1591 aa3.05□□□□□ -1.92
COPS3-217ENST00000583160 MAST1Q9Y2H9 1570 aa3.05□□□□□ -1.92
COPS3-217ENST00000583160 CEP170BQ9Y4F5 1589 aaPredicted RBP3.05□□□□□ -1.92
COPS3-217ENST00000583160 EHBP1L1Q8N3D4 1523 aa3.05□□□□□ -1.92
COPS3-217ENST00000583160 SYCP2Q9BX26 1530 aa3.05□□□□□ -1.92
COPS3-217ENST00000583160 A2ML1A8K2U0 1454 aa3.05□□□□□ -1.92
COPS3-217ENST00000583160 A8MVM7 634 aa3.05□□□□□ -1.92
COPS3-217ENST00000583160 SH3BGRLO75368 114 aa3.05□□□□□ -1.92
COPS3-217ENST00000583160 PRDM1O75626 825 aa3.05□□□□□ -1.92
COPS3-217ENST00000583160 CD59P13987 128 aa3.05□□□□□ -1.92
COPS3-217ENST00000583160 MYL6BP14649 208 aa3.05□□□□□ -1.92
COPS3-217ENST00000583160 KLK2P20151 261 aa3.05□□□□□ -1.92
COPS3-217ENST00000583160 C4BPBP20851 252 aa3.05□□□□□ -1.92
COPS3-217ENST00000583160 ACHEP22303 614 aa3.05□□□□□ -1.92
COPS3-217ENST00000583160 DUTP33316 252 aaKnown RBP3.05□□□□□ -1.92
COPS3-217ENST00000583160 KRTAP10-8P60410 259 aa3.05□□□□□ -1.92
COPS3-217ENST00000583160 MAPRE1Q15691 268 aaKnown RBP3.05□□□□□ -1.92
COPS3-217ENST00000583160 RBBP7Q16576 425 aa3.05□□□□□ -1.92
COPS3-217ENST00000583160 CRY2Q49AN0 593 aa3.05□□□□□ -1.92
COPS3-217ENST00000583160 GPR139Q6DWJ6 353 aa3.05□□□□□ -1.92
COPS3-217ENST00000583160 OR9Q2Q8NGE9 314 aa3.05□□□□□ -1.92
COPS3-217ENST00000583160 CASP10Q92851 521 aa3.05□□□□□ -1.92
COPS3-217ENST00000583160 SPSB1Q96BD6 273 aa3.05□□□□□ -1.92
COPS3-217ENST00000583160 CNOT6LQ96LI5 555 aaKnown RBP3.05□□□□□ -1.92
COPS3-217ENST00000583160 IL12RB2Q99665 862 aa3.05□□□□□ -1.92
COPS3-217ENST00000583160 IL1RAPQ9NPH3 570 aa3.05□□□□□ -1.92
COPS3-217ENST00000583160 TNFRSF19Q9NS68 423 aa3.05□□□□□ -1.92
COPS3-217ENST00000583160 PKD2L2Q9NZM6 624 aa3.05□□□□□ -1.92
COPS3-217ENST00000583160 POLKQ9UBT6 870 aa3.05□□□□□ -1.92
COPS3-217ENST00000583160 B4GALT7Q9UBV7 327 aa3.05□□□□□ -1.92
COPS3-217ENST00000583160 KAT6BQ8WYB5 2073 aa3.05□□□□□ -1.92
COPS3-217ENST00000583160 POLR1AO95602 1720 aaPredicted RBP3.05□□□□□ -1.92
COPS3-217ENST00000583160 SUPT6HQ7KZ85 1726 aaKnown RBP3.05□□□□□ -1.92
COPS3-217ENST00000583160 CLTCQ00610 1675 aaKnown RBP3.04□□□□□ -1.92
COPS3-217ENST00000583160 ZC3H13Q5T200 1668 aaKnown RBP3.04□□□□□ -1.92
COPS3-217ENST00000583160 EIF2AK4Q9P2K8 1649 aaKnown RBP3.04□□□□□ -1.92
COPS3-217ENST00000583160 CPS1P31327 1500 aa3.04□□□□□ -1.92
COPS3-217ENST00000583160 PZPP20742 1482 aa3.04□□□□□ -1.92
COPS3-217ENST00000583160 CAMSAP2Q08AD1 1489 aa3.04□□□□□ -1.92
COPS3-217ENST00000583160 NLRP1Q9C000 1473 aa3.04□□□□□ -1.92
COPS3-217ENST00000583160 SPAG9O60271 1321 aaKnown RBP3.04□□□□□ -1.92
COPS3-217ENST00000583160 RNF123Q5XPI4 1314 aa3.04□□□□□ -1.92
COPS3-217ENST00000583160 YES1P07947 543 aa3.04□□□□□ -1.92
COPS3-217ENST00000583160 STAG3L1P0CL83 205 aa3.04□□□□□ -1.92
COPS3-217ENST00000583160 LMO2P25791 158 aa3.04□□□□□ -1.92
COPS3-217ENST00000583160 CAPZA2P47755 286 aa3.04□□□□□ -1.92
COPS3-217ENST00000583160 RAB28P51157 221 aa3.04□□□□□ -1.92
COPS3-217ENST00000583160 SRPXP78539 464 aa3.04□□□□□ -1.92
COPS3-217ENST00000583160 SIX1Q15475 284 aaPredicted RBP3.04□□□□□ -1.92
COPS3-217ENST00000583160 C9orf66Q5T8R8 295 aa3.04□□□□□ -1.92
COPS3-217ENST00000583160 SUSD4Q5VX71 490 aa3.04□□□□□ -1.92
COPS3-217ENST00000583160 RNLSQ5VYX0 342 aa3.04□□□□□ -1.92
COPS3-217ENST00000583160 TTC27Q6P3X3 843 aa3.04□□□□□ -1.92
COPS3-217ENST00000583160 PLPPR4Q7Z2D5 763 aa3.04□□□□□ -1.92
COPS3-217ENST00000583160 ANKRD33Q7Z3H0 272 aa3.04□□□□□ -1.92
COPS3-217ENST00000583160 MFN1Q8IWA4 741 aa3.04□□□□□ -1.92
COPS3-217ENST00000583160 SLC34A3Q8N130 599 aa3.04□□□□□ -1.92
COPS3-217ENST00000583160 CCDC63Q8NA47 563 aa3.04□□□□□ -1.92
COPS3-217ENST00000583160 SEPT1Q8WYJ6 367 aa3.04□□□□□ -1.92
COPS3-217ENST00000583160 PYCR2Q96C36 320 aa3.04□□□□□ -1.92
COPS3-217ENST00000583160 HDAC11Q96DB2 347 aa3.04□□□□□ -1.92
COPS3-217ENST00000583160 HNRNPABQ99729 332 aaKnown RBP3.04□□□□□ -1.92
COPS3-217ENST00000583160 ZNF581Q9P0T4 197 aa3.04□□□□□ -1.92
COPS3-217ENST00000583160 PLCL2Q9UPR0 1127 aa3.04□□□□□ -1.92
COPS3-217ENST00000583160 NEURL4Q96JN8 1562 aa3.04□□□□□ -1.92
COPS3-217ENST00000583160 CCDC141Q6ZP82 1450 aa3.03□□□□□ -1.92
COPS3-217ENST00000583160 ARHGAP31Q2M1Z3 1444 aa3.03□□□□□ -1.92
COPS3-217ENST00000583160 MIA2Q96PC5 1412 aa3.03□□□□□ -1.92
COPS3-217ENST00000583160 CCNB3Q8WWL7 1395 aa3.03□□□□□ -1.92
COPS3-217ENST00000583160 ZNF749O43361 778 aa3.03□□□□□ -1.92
COPS3-217ENST00000583160 ADORA3P0DMS8 318 aa3.03□□□□□ -1.92
COPS3-217ENST00000583160 GIFP27352 417 aa3.03□□□□□ -1.92
COPS3-217ENST00000583160 RIDAP52758 137 aaKnown RBP3.03□□□□□ -1.92
COPS3-217ENST00000583160 ABCE1P61221 599 aaKnown RBP3.03□□□□□ -1.92
COPS3-217ENST00000583160 BECN1Q14457 450 aa3.03□□□□□ -1.92
COPS3-217ENST00000583160 MLF2Q15773 248 aaPredicted RBP3.03□□□□□ -1.92
COPS3-217ENST00000583160 ERMARDQ5T6L9 678 aa3.03□□□□□ -1.92
COPS3-217ENST00000583160 FHL5Q5TD97 284 aa3.03□□□□□ -1.92
COPS3-217ENST00000583160 RBPMS2Q6ZRY4 209 aaKnown RBP3.03□□□□□ -1.92
COPS3-217ENST00000583160 PIGWQ7Z7B1 504 aa3.03□□□□□ -1.92
COPS3-217ENST00000583160 AMIGO1Q86WK6 493 aa3.03□□□□□ -1.92
COPS3-217ENST00000583160 KRTAP11-1Q8IUC1 163 aa3.03□□□□□ -1.92
COPS3-217ENST00000583160 CD177Q8N6Q3 437 aa3.03□□□□□ -1.92
COPS3-217ENST00000583160 Q8N7P7 452 aa3.03□□□□□ -1.92
COPS3-217ENST00000583160 AGAP11Q8TF27 550 aa3.03□□□□□ -1.92
COPS3-217ENST00000583160 C11orf52Q96A22 123 aa3.03□□□□□ -1.92
COPS3-217ENST00000583160 TAAR6Q96RI8 345 aa3.03□□□□□ -1.92
COPS3-217ENST00000583160 RBM24Q9BX46 236 aaKnown RBP3.03□□□□□ -1.92
COPS3-217ENST00000583160 LRRCC1Q9C099 1032 aa3.03□□□□□ -1.92
COPS3-217ENST00000583160 SLITRK2Q9H156 845 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms